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Dataset results
43 results for “HMSC”
Model output for five Hmsc models of alpine grassland communities
<p>Model output from five joint species distribution models made with Hmsc in R. One 'global' model with all data, and one model for each of four sites Skjellingahaugen, Gudmedalen, Låvisdalen, and Ulvehaugen.<br> <br> Omegas are species co-occurrence estimates.</p> <p>Models defined by EL, OO, data formatted by EL, model fit by OO.</p> <p>Scripts for model fitting and presenting output are not published here but follow the generic Hmsc pipeline as published in Ovaskainen & Abrego (2020). Joint Species Distribution Modelling With Applications in R. Cambridge university press. DOI: <a href="https://doi.org/10.1017/9781108591720">https://doi.org/10.1017/9781108591720</a></p> <p> </p>
Analysis of hMSC-derived chondrocytes in response to stimulation with SARS-CoV-2 spike proteins
<p>Previous studies have detected the presence of SARS-CoV-2 viral proteins in bronchial cartilage chondrocytes. We hypothesised that the leakage of viral proteins to local joint tissue was due to virus-induced endothelial dysfunction. Studies have also shown upregulation of endothelin-1 (ET-1), the most potent vasoconstrictor, in COVID patients. We are investigating the direct effect of SARS-CoV-2 spike protein (SP) and the host response to chondrocytes.</p> <p>Human mesenchymal stem cells (hMSCs)-differentiated chondrocytes were treated with either full-length SARS-CoV-2 spike protein (SP) only or a combination of spike protein, neutralising antibody to S1 and endothelin-1 (SAE) to mimic viral insult and host response respectively. RNA sequencing was performed to compared the change in transcriptome in control, SP, and SAE. All samples were processed in the same batch. Default quality control parameters were used.</p>
The Transendocardial Autologous Cells (hMSC or hBMC) in Ischemic Heart Failure Trial (TAC-HFT)
ClinicalTrials.gov study NCT00768066. IPD Sharing: Not stated. Countries: 1. Publications: 3.
AllogeneiC Human Mesenchymal Stem Cells (hMSC) in Patients With Aging FRAilTy Via IntravenoUS Delivery
ClinicalTrials.gov study NCT02065245. IPD Sharing: NO. Countries: 1. Publications: 3.
Allogeneic Human Cells (hMSC)in Patients With Idiopathic Pulmonary Fibrosis Via Intravenous Delivery (AETHER)
ClinicalTrials.gov study NCT02013700. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Allogeneic Human Cells (hMSC) Via Intravenous Delivery in Patients With Mild Asthma
ClinicalTrials.gov study NCT03137199. IPD Sharing: NO. Countries: 1. Publications: 72.
Gene expression in human bone marrow Mesenchymal Stem cell line (hMSC-TERTs) during proliferation, quiescence (G0-arrest) and re-activation.
GEO Series GSE60608. Homo sapiens. 15 samples. Type: Expression profiling by array.
Generation and Characterization of an immortalized human mesenchymal stromal cell line model [Illumina iMSC#3 and hMSC primary cultures]
GEO Series GSE47648. Homo sapiens. 3 samples. Type: Expression profiling by array.
Increased levels of aneuploidy and deregulation of ploidy controlling genes are associated with maintained cultures of hMSC
GEO Series GSE39250. Homo sapiens. 8 samples. Type: Expression profiling by array.
Expression profiling of MIR181A1HG interference in hMSC-hTERT20 cells
GEO Series GSE184087. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Expression profiling of LINC01638 interference in hMSC-hTERT20 cells
GEO Series GSE227512. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Stabilization of Heterochromatin by CLOCK Counteracts hMSC Senescence and Articular Degeneration
GEO Series GSE145019. Homo sapiens; Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
arrayCGH from human mesenchymal stem cells (hMSC) and hMSC after adipogenic and osteogenic differentiation
GEO Series GSE88947. Homo sapiens. 5 samples. Type: Genome variation profiling by genome tiling array.
Gene expression analysis during adipocytic differentiation of human bone marrow cells (hMSC-TERT)
GEO Series GSE59450. Homo sapiens. 6 samples. Type: Expression profiling by array.
Transcriptome profilng of hMSC-hTERT20 cells undergoing osteogenic differentiation
GEO Series GSE183931. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
microRNA expression profiling during Adipocytic differentiation of human MSCs (hMSC-TERT)
GEO Series GSE59684. synthetic construct; Homo sapiens. 9 samples. Type: Non-coding RNA profiling by array.
Human Mesenchymal Stem Cells (hMSC) in Behavioral Problems Due to Alzheimer's Disease.
ClinicalTrials.gov study NCT06781333. IPD Sharing: NO. Countries: 1. Publications: 0.
The Transendocardial Autologous Cells (hMSC) or (hMSC) and (hCSC) in Ischemic Heart Failure Trial.
ClinicalTrials.gov study NCT02503280. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Intra-Osseous Co-Transplant of UCB and hMSC
ClinicalTrials.gov study NCT02181478. IPD Sharing: Not stated. Countries: 1. Publications: 0.
University of Wisconsin hMSC Cell Bank: Bone Marrow Donor Protocol
ClinicalTrials.gov study NCT01463475. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.