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4 results for “HPAI”
2021_HPAI_AvianHost_DistributionIndices
<p>Weighted Index and formatted distribution data for HPAI hosts. </p> <p><strong>Abstract: </strong></p> <p>A series of descriptive metrics were produced as host distribution indices for use as covariates in HPAI spatial modelling. The following bird species were included. For each, disptribution maps were extracted from the Birdlife International datasets and idvidual ratster images were produced for breeding, passage, resident and passage distributions. <br> Anas crecca, Anas penelope, Anal platyrhynchos, Anser anser, Aytha fuligula, Bucephala clangula, Cygnus color, Cygnus cygnus, Mareca penelope, Mareca strepera,<br> Combination images for all species were also produced , each giving the number of species per pixel for each category ( Anatidae passage, Anatidae breeding, Anatidae resident, Anatidae nonbreeding,.</p> <p> </p> <p><strong>File naming scheme: </strong></p> <p>Filenames = AIHOSTxxxxsum.tif where XXX = breeding, nobreeding, resident, passage)</p> <p> </p> <p><strong>Projection </strong>+ EPSG code:<br>Latitude-Longitude/WGS84 (EPSG: 4326)</p> <p><strong>Spatial extent:</strong><br>Extent -32.0000000000000000,10.0000000000000000 : 68.9999999999999574,81.9999999999999716</p> <p><strong>Spatial resolution:</strong><br>0.0083333 deg (approx. 1000 m) </p> <p><strong>Pixel values:</strong><br>Number of species per pixel for each category</p> <p><strong>Source: </strong></p> <p>Birdlife International datasets</p> <p><strong>Software used:</strong><br>ArcMap 10.8</p> <p><strong>License:</strong> CC-BY-SA 4.0</p> <p><strong>Processed by</strong>:<br>ERGO (Environmental Research Group Oxford) <a href="https://ergoonline.co.uk/" target="_blank" rel="noopener">https://ergoonline.co.uk/</a> for the H2020 MOOD project</p>
Estimated mortality of the Highly Pathogenic Avian Influenza (HPAI) pandemic on Northern gannets (Morus bassanus) in southwest Ireland
<p><span>The 2022 Highly Pathogenic Avian Influenza (HPAI) outbreak that occurred in 2022 in many European countries affected several seabird species. Among them, Northern gannets (<em>Morus</em> <em>bassanus</em>), were particularly impacted. We conducted aerial surveys in waters around the two largest gannet colonies in Ireland (Little Skellig and Bull Rock, together representing 87% of the national population) in September 2022. During surveys, 184 dead gannets were recorded on survey effort, representing 3.74% of the total number of gannets recorded. We estimated the abundance of dead gannets in the surveyed area at 1,526 (95% CIs 1,299–1,793) individuals. The percentage of dead gannets observed was used to estimate a minimum local population mortality of 3,118 individuals across both colonies. Aerial surveys proved a reliable methodology providing key information on gannet mortality derived from HPAI at sea. The study provides the first estimate of gannet mortality in the two largest gannetries in Ireland.</span></p>
Estimated mortality of the Highly Pathogenic Avian Influenza (HPAI) pandemic on Northern gannets (Morus bassanus) in southwest Ireland
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Supplementary Tables S1 and S2 - Wild bird densities and landscape variables predict spatial patterns in HPAI outbreak risk across the Netherlands
<p>Table S1: Overview of candidate variables in order of (Rank) decreasing feature importance, including a selection of high risk bird species for HPAIV infection and land cover variables.</p> <p>Table S2: Aggregation of land cover classes to 5 major classes used in the random forest algorithms.</p>
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