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44 results for “Hemagglutinin”
H7 hemagglutinin lineage identification
<p>This is the nucleotide sequence data and the R files for the k-means clustering of the H7 hemagglutinin segment of Influenza A. </p> <ol> <li>H7_HA_IRDB_2019_1_14.fasta is the initial data downloaded from the Influenza Research Database</li> <li>H7_HA_IRDB_2019_1_14_aligned_muscle.fasta is the sequence data aligned with Muscle</li> <li>H7_HA_IRDB_2019_1_14_aligned_muscle_cleaned.fas is the aligned sequence data after problem sequence have been removed.</li> <li>RNA_distances_HA_kmeans_analysis.R is the R code for carrying out the k-means clustering and diagnostics.</li> <li>kmeans_clustering.pdf is the R-markdown generated document describing the R-code for k-means clustering.</li> <li>clustered_HA_kmeans_RNA.csv are the results of the clustering</li> <li>usearch_clustering.csv is a summary of the USEARCH results.</li> <li>Clade_Alpha.tree - alpha clade phylogenetic tree</li> <li>Clade_Beta.tree - beta clade phylogenetic tree</li> <li>Clade A-D trees are the phylogenetic trees for clades A to D.</li> <li>H7_HA_IRDB_2019_1_14_aligned_muscle_cleaned_fasttree_coloured.tree is the overview tree of all the sequences.</li> </ol> <p> </p>
Phylogenetic Analysis of the Influenza H5 hemagglutinins.
<p>These are the complete files for the phylogenetic analysis of all of the H5 hemagglutinin segments available from the NCBI influenza resource in June 2015. This includes the sequences downloaded from the database in fasta format. The sequences after alignment with MAFFT and the tree files generated by FastTree2.1.</p>
Evaluation of Anti-Hemagglutinin (Anti-HA) Antibodies as Protection From the Flu in Healthy People
ClinicalTrials.gov study NCT01971255. IPD Sharing: YES. Countries: 1. Publications: 5.
A Laboratory Evaluation of the Humoral Immune Response in Adults and Children to the H1 Hemagglutinin (HA) Stalk Domain and Other Influenza A Virus Protein Epitopes, After Administration of GlaxoSmith
ClinicalTrials.gov study NCT02415842. IPD Sharing: NO. Countries: 1. Publications: 1.
Supplementary data from: Assessing the structural boundaries of broadly reactive antibody interactions with diverse H3 influenza hemagglutinin proteins
Open the record for dataset details and reuse information.
Molecular Dynamics Trajectories of Membrane-bound Influenza Hemagglutinin (A/duck/Alberta/35/76) in Complex with 0-3 Copies of FISW84 Fab Fragments
<p>MD simulation trajectories of influenza hemagglutinin (A/duck/Alberta/35/76) in a bilayer mimicking the viral membrane, with 0-3 copies of FISW84 antibody's Fab domains bound.</p> <p>Files are named as (copy number of Fab).(simulation replica ID).(file type extension). The systems were constructed in CHARMM format PSF files and the trajectories were recorded in DCD format.</p> <p>Simulations were performed with NAMD3. The trajectories were re-centered and re-wrapped about the periodic boundary from the raw trajectories, in order to keep the HA-Fab complex and the lipid bilayer appearing as a single continuous entity instead of isolated molecules at the opposite side of the periodic boundary. Water molecules in the simulation were removed in these trajectories due to file size limitations.</p>
Phase I Open-Label Study of Recombinant DNA Plasmid Vaccine, VRC-AVIDNA036-00-VP, Encoding for Influenza Virus H5 Hemagglutinin Protein Given Intradermally
ClinicalTrials.gov study NCT00489931. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Immunogenicity and Safety of FluBlok Trivalent Recombinant Hemagglutinin Influenza Vaccine in Healthy Pediatrics
ClinicalTrials.gov study NCT00336453. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Long-term Observation of Hemagglutinin and Neuraminidase Inhibition Antibody Titers After Influenza Challenge
ClinicalTrials.gov study NCT02511002. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Immunogenicity and Safety of Trivalent Recombinant Hemagglutinin Influenza Vaccine in Healthy Adults
ClinicalTrials.gov study NCT00328107. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Substudy 01 - Safety and Immunogenicity of One Monovalent Modified mRNA Vaccine Encoding Influenza Hemagglutinin With LNP, in Adult Participants Aged 18 to 49 Years and 60 Years and Above
ClinicalTrials.gov study NCT05829356. IPD Sharing: YES. Countries: 2. Publications: 0.
Safety and Immunogenicity of a Monovalent mRNA Vaccine Encoding Influenza Hemagglutinin in Adult Participants 18 Years of Age and Older
ClinicalTrials.gov study NCT06118151. IPD Sharing: YES. Countries: 1. Publications: 0.
Safety and Immunogenicity of Quadrivalent Recombinant Influenza Vaccine Formulations Containing Different H3 Hemagglutinin Antigens in Healthy Adult Subjects 18 to 30 Years of Age
ClinicalTrials.gov study NCT04144179. IPD Sharing: YES. Countries: 1. Publications: 0.
Long-lasting B cell convergence to distinct broadly reactive epitopes following vaccination with chimeric influenza virus hemagglutinins II
GEO Series GSE260941. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing; Other.
The Heparin-binding hemagglutinin protein of Mycobacterium tuberculosis is a nucleoid-associated protein
GEO Series GSE235293. Mycobacterium tuberculosis. 16 samples. Type: Expression profiling by high throughput sequencing.
Synthetic DNA co-immunization with vaccine-aligned common consensus nucleoprotein and hemagglutinin protects mice against lethal influenza infection with a single immunization
GEO Series GSE306862. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
The antibody landscapes against Group 1 and 2 influenza virus hemagglutinin following AS03 and MF59 adjuvanted H5N1 vaccination (probing_4_igg)
GEO Series GSE202390. Homo sapiens; Influenza A virus; Influenza B virus. 450 samples. Type: Protein profiling by protein array.
The antibody landscapes against Group 1 and 2 influenza virus hemagglutinin following AS03 and MF59 adjuvanted H5N1 vaccination (probing_2_igg)
GEO Series GSE202385. Influenza B virus; Homo sapiens; Influenza A virus. 390 samples. Type: Protein profiling by protein array.
B cell imprinting in children impairs antibodies to the hemagglutinin stalk
GEO Series GSE297740. Homo sapiens. 68 samples. Type: Expression profiling by high throughput sequencing; Other.
Transcriptome signatures preceding the induction of anti-stalk antibodies elicited by a chimeric hemagglutinin-based universal influenza virus vaccine
GEO Series GSE217770. Homo sapiens. 371 samples. Type: Expression profiling by high throughput sequencing.
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.