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6 results for “Heosemys”

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Figure 4 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 4. Majority-rule consensus tree of the posterior distribution of trees from the Bayesian analyses of the concatenated nuclear loci data (11 loci, 7541 bp). -lnL = 12 653.11. Models of molecular evolution for each loci: GTR (AHR, AIING, BMP2, HMGB2, PAX, R35, and TFGB2); HKY (HNFL, TB01, and TB29), and HKY + G (NB22519). Bayesian support values (posterior probabilities, PPs) as indicated. Numbers above branches are maximum likelihood (ML) bootstrap support values. Mitochondrial clade membership is indicated for each sample. The out-group branch is not drawn to scale.

opennotspecifiedMar 2012View details →
zenodo32/100

Figure 5 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 5. Lineage diversification results for Heosemys, with Heosemys spinosa split into two (A and B, top panel) or three (A, C, D, bottom panel) clades. Estimates were generated using priors for Q of G(2, 200) and G(2, 2000), whereas priors for T were G(2, 2000) for all analyses. Numbers above nodes are posterior probability (PP) support values. PP support values for node e (all runs) are provided below the tree. Means and standard deviations for Q and T, and -log likelihood scores for each analysis are provided in Table S1.

opennotspecifiedMar 2012View details →
zenodo32/100

Figure 1 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 1. Map of the Sundaland region showing historical collection localities for Heosemys spinosa as purple (dark grey in the print version) circles (coordinates from http://emys.geo.orst.edu). The arrow indicates the collection locality for sample ELR230A (deposited at the National Museum of the Philippines) from the Island of Tawi Tawi, Philippines.

opennotspecifiedMar 2012View details →
zenodo32/100

Figure 6 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 6. Incorrect classification frequencies for the discriminant function analysis (DFA) of 19 Heosemys spinosa specimens, based on membership of the two mitochondrial DNA clades (A and B, see Fig. 3), and for 100 randomly created groups of nine and ten individuals.

opennotspecifiedMar 2012View details →
zenodo32/100

Figure 3 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 3. Heosemys mitochondrial phylogeny: majority-rule consensus tree of the posterior distribution of trees from the Bayesian analyses of the cytochrome b data set (971 bp). Model of molecular evolution: GTR + G. Support values (posterior probabilities, PPs) as indicated.

opennotspecifiedMar 2012View details →
zenodo32/100

Figure 2 in Cryptic variation and the tragedy of unrecognized taxa: the case of international trade in the spiny turtle Heosemys spinosa (Testudines: Geoemydidae)

Figure 2. Side-by-side comparisons showing variation in relative size, iris colour, and light versus dark shell coloration among samples of Heosemys spinosa. The images show some of the variation present among six individual turtles, but are not meant to indicate that there two discrete groups of turtles in this collection.

opennotspecifiedMar 2012View details →

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