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Catalogue for NIRCAM ICEAGE data - public release to match spectra
<p>This is the latest catalogue for the NIRCAM team. V12. </p> <p>This should be used in conjunction with the spectral release </p> <p><a href="https://zenodo.org/records/15920870">https://zenodo.org/records/15920870</a></p> <p>to get photometry and source properties. RA DEC etc</p> <p> </p> <p>This is the initial catalogue delivery (V3_PUBLIC) for the ICEAGE NIRCAM WFSS observations of Cha I.</p> <p>This data was previously embargoed to ERS ICEAGE TEAM, but is now publically available.</p> <p> </p> <div> <p>Please START by reading the <strong>READ_ME_ICEAGE_catalogue_V12.pdf </strong>document.</p> <p>Please also read the READ on the spectral delivery page as this includes details wrt authorship and arising articles, as well as other very pertinent information that could answer A LOT of your questions and queries.<strong> </strong></p> <p>Until such a time, if there are any queries on teh catalogue - before using it for science <strong>PLEASE contact Helen Fraser and / or Zak Smith. We are very happy to help with identifying sutable spectra, understanding what you are looking at and matching the two filter datasets to get single spectra coverage from 2-5 mcirons. We are also happy to help with siftign catalogue sources to your needs. </strong>And don’t forget to check with the ICEAGE PIs and especially Adwin who is leading the NIRCAM team wrt. ongoing papers and work before initiating a project.</p> <p> </p> <p><em><strong>PLEASE do not use the data for publications or proposals without the express permission of the ICEAGE PIs Adwin Boogert and Melissa McClure : please also ensure that appropriate credit and authoriship is gifted to the individuals who did the hard work generating this community resource. </strong></em></p> <p><em><strong> </strong></em></p> <p>Enjoy doing new science!! We look forward to our data set beign well used.</p> </div> <p> </p> <p> </p>
Supplementary material 3 from: Lörz A-N, Tandberg AHS, Willassen E, Driskell A (2018) Rhachotropis (Eusiroidea, Amphipoda) from the North East Atlantic. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 75–101. https://doi.org/10.3897/zookeys.731.19814
Figure S1. Tree showing COI sequence cluster derived from ABGD (Automatic Barcode Gap Discovery) analysis using simple distances and default parameter settings. :
Supplementary material 2 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Supplementary material 2 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Supplementary material 3 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Supplementary material 3 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Supplementary material 1 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Table 1. Samples used for present study. : Explanation note: Stations are organised according to the percentage of amphipods identified to the family level. Only the stations marked in green were used for primer analysis, while all were the basis for map preparation. Amphipod taxa are presented from the most to the least abundant in all samples.
Supplementary material 1 from: Lörz A-N, Tandberg AHS, Willassen E, Driskell A (2018) Rhachotropis (Eusiroidea, Amphipoda) from the North East Atlantic. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 75–101. https://doi.org/10.3897/zookeys.731.19814
Table S1. Extended overview of all samples used in analyses with geographical and environmental details : Explanation note: Depths indicated in red have been found using the latitude and longitude information with the datapoint and the bathymetry-layer on Google Earth Pro. Depths indicated in blue are inferred from the general depths in the named (no latitude or longitude given) geographical location, given bathymetry-layer on Google Earth Pro.
Supplementary material 1 from: Jażdżewska AM, Corbari L, Driskell A, Frutos I, Havermans C, Hendrycks E, Hughes L, Lörz A-N, Stransky B, Tandberg AHS, Vader W, Brix S (2018) A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 55–73. https://doi.org/10.3897/zookeys.731.19931
Table S1 : Explanation note: Amphipod and outgroup accession numbers in BOLD, GenBank and station data.
Supplementary material 4 from: Lörz A-N, Tandberg AHS, Willassen E, Driskell A (2018) Rhachotropis (Eusiroidea, Amphipoda) from the North East Atlantic. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 75–101. https://doi.org/10.3897/zookeys.731.19814
Figure S2. Bayesian consensus tree from COI sequences. Numbers on branches are posterior probabilities. See text for further information. :
Supplementary material 2 from: Lörz A-N, Tandberg AHS, Willassen E, Driskell A (2018) Rhachotropis (Eusiroidea, Amphipoda) from the North East Atlantic. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 75–101. https://doi.org/10.3897/zookeys.731.19814
Table S2. Geographic distances between stations (sample name) in km. :
Figure 9 from: Peart RA (2018) Ampeliscidae (Crustacea, Amphipoda) from the IceAGE expeditions. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 145–173. https://doi.org/10.3897/zookeys.731.19948
Figure 9 Haploops kaimmalkai sp. n. holotype, female, 6 mm, ZMH K-47057, Iceland Basin, 1384.8–1389 m. Scales represent 0.2 mm.
Figure 8 from: Peart RA (2018) Ampeliscidae (Crustacea, Amphipoda) from the IceAGE expeditions. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 145–173. https://doi.org/10.3897/zookeys.731.19948
Figure 8 Haploops kaimmalkai sp. n. holotype, female, 6 mm, ZMH K-47057, Iceland Basin, 1384.8–1389 m. Whole animal, head and epimeron. Habitus scale represents 1 mm.
Figure 2 from: Jażdżewska AM, Corbari L, Driskell A, Frutos I, Havermans C, Hendrycks E, Hughes L, Lörz A-N, Stransky B, Tandberg AHS, Vader W, Brix S (2018) A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 55–73. https://doi.org/10.3897/zookeys.731.19931
Figure 2 Neighbour-joining (NJ) tree of COI sequences (Suppl. material 1) based on Kimura 2-parameter. Triangles indicate the relative number of individuals studied (height) and sequence divergence (width). The asterisk (*) symbolizes taxa having already published sequences in BOLD/GenBank identified to species level. The numbers in front of the nodes indicate bootstrap support (1000 replicates, only values higher than 50% are presented). The vertical bars represent species delimitations taxonomies obtained from morphology and different species delimitation methods. The same colour indicates the same nominal species. Only the cases where incongruence between different delimitation methods were observed are shown. Note that this tree is not the reconstruction of evolutionary history of presented taxa.
Figure 6 from: Peart RA (2018) Ampeliscidae (Crustacea, Amphipoda) from the IceAGE expeditions. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 145–173. https://doi.org/10.3897/zookeys.731.19948
Figure 6 Haploops dauvini sp. n., holotype, female, 7 mm, ZMH K-47038, Norwegian Channel, 587.4–614.4 m. Antennae 1–2, gnathopods 1–2 scales represent 0.5 mm. Mouthparts scales represent 0.2 mm.
Figure 2 from: Peart RA (2018) Ampeliscidae (Crustacea, Amphipoda) from the IceAGE expeditions. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 145–173. https://doi.org/10.3897/zookeys.731.19948
Figure 2 Byblisoides bellansantiniae sp. n. Holotype, female, 14 mm, ZMH K-47035, Irminger Basin, Iceland, 2537.3–2538.1 m. Whole animal, head and epimeron. Scale for habitus represents 1 mm.
Figure 5 from: Peart RA (2018) Ampeliscidae (Crustacea, Amphipoda) from the IceAGE expeditions. In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 145–173. https://doi.org/10.3897/zookeys.731.19948
Figure 5 Haploops dauvini sp. n., holotype, female, 7 mm, ZMH K-47038, Norwegian Channel, 587.4–614.4 m. Whole animal, head and epimeron. Habitus scale represents 1 mm.
Figure 3 from: Tandberg AHS, Vader W (2018) On a new species of Amphilochus from deep and cold Atlantic waters, with a note on the genus Amphilochopsis (Amphipoda, Gammaridea, Amphilochidae). In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 103–134. https://doi.org/10.3897/zookeys.731.19899
Figure 3 Amphilochus anoculus sp. n. Pereopods 1, 2, 3 and 4. ZMBN121952. Pereopod 1 dactylus from ZMH K-47225. Scale bars: 0.1 mm.
Figure 4 from: Tandberg AHS, Vader W (2018) On a new species of Amphilochus from deep and cold Atlantic waters, with a note on the genus Amphilochopsis (Amphipoda, Gammaridea, Amphilochidae). In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 103–134. https://doi.org/10.3897/zookeys.731.19899
Figure 4 Amphilochus anoculus sp. n. Pereopods 5, 6 and 7, Epimeral plates, Uropods 1, 2 from ZMBN121952. Uropod 3 and telson from BioIce station 2367. Scale bars: 0.1 mm.
Figure 13 from: Tandberg AHS, Vader W (2018) On a new species of Amphilochus from deep and cold Atlantic waters, with a note on the genus Amphilochopsis (Amphipoda, Gammaridea, Amphilochidae). In: Brix S, Lörz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 103–134. https://doi.org/10.3897/zookeys.731.19899
Figure 13 Photographs of habitus A Amphilochus anoculus sp. n. ZMBN_104532 B Amphilochus hamatus ZMBN_104479 C Amphilochus manudens ZMBN_103989 D Amphilochus manudens UMBergen_NBamph_123.
Figure 8 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Figure 8 - Dendrogram of samples for the family level data (Bray-Curtis similarity, group average grouping method and presence/absence transformed data). Abbreviations: RR - Reykjanes Ridge, NS - Norwegian Sea, DS - Denmark Strait, IB - Iceland Basin, IrmB - Irminger Basin, WFI - west off Faroe Islands, EFI - east off Faroe Islands, SFI - South of Faroe Islands, NFI - North of Faroe Islands. (Grey spotted lines indicate the samples that cannot be significantly differentiated by SIMPROF.) Regions are named based on the habitats defined by Meißner et al. (2014).
Figure 7 from: Brix S, Lorz A-N, Jazdzewska AM, Hughes L, Tandberg AHS, Pabis K, Stransky B, Krapp-Schickel T, Sorbe JC, Hendrycks E, Vader W, Frutos I, Horton T, Jazdzewski K, Peart R, Beermann J, Coleman CO, Buhl-Mortensen L, Corbari L, Havermans C, Tato R, Campean AJ (2018) Amphipod family distributions around Iceland. In: Brix S, Lorz A-N, Stransky B, Svavarsson J (Eds) Amphipoda from the IceAGE-project (Icelandic marine Animals: Genetics and Ecology). ZooKeys 731: 1-53. https://doi.org/10.3897/zookeys.731.19854
Figure 7 - Distribution map for Corophiida a Aoridae b Caprellidae c Dulichiidae d Ischyroceridae e Podoceridae f Photidae g Unciolidae h Hyperiidea, in sorted IceAGE EBS samples.
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