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2 results for “Image-enabled cell sorting”
Computer code accompanying Schraivogel, D. et al. "High-speed fluorescence image-enabled cell sorting" Science, 2022. doi: 10.1126/science.abj3013
<p>Computer code accompanying Schraivogel et al. "High-speed fluorescence image-enabled cell sorting". Details are provided in the manuscript's data and materials availability section and table 3.</p> <p> </p> <p>We provide three directories:</p> <p>(1) R code to reproduce figures (ICS2021_0.1.0.tar.gz)</p> <p>(2) Python code to reproduce figures (ICS_Fiji_Plugin.zip)</p> <p>(3) Code for ICS/CellView Fiji plugins (ICSPython.zip)</p> <p> </p> <p>Code for (1) and (3) has also been shared via Github:</p> <p>https://github.com/benediktrauscher/ICS</p> <p>https://github.com/embl-cba/ICS</p> <p> </p> <p>We recommend downloading the ICS Fiji plugins via Github or to install them using the Fiji update site to ensure you're using the most recent version.</p>
High-speed fluorescence image-enabled cell sorting
GEO Series GSE167944. Homo sapiens. 39 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.