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44 results for “Insulator proteins”
Dataset associated with the study titled "Systematic discovery of regulatory motifs associated with human insulator sites" It includes data used for predicting insulator-associated DNA-binding proteins.
<p><strong>This dataset was used in the study on the prediction of insulator-associated DNA-binding proteins.</strong></p> <p>The three files included here are intended for use with the code available in the following GitHub repository:<br><a href="https://github.com/reposit2/insulator" target="_new" rel="noopener">https://github.com/reposit2/insulator</a></p> <p>To use the data, extract all three files and place them in the same directory as the code files.</p>
Data from: Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
Open the record for dataset details and reuse information.
Ibf1 and Ibf2 are DNA-binding proteins required for insulator function in Drosophila [ChIP-seq]
GEO Series GSE46614. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Isha is a su(Hw) mRNA-binding protein required for insulator function [ChIP-seq]
GEO Series GSE200993. Drosophila melanogaster. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The insulator protein SU(HW) modulates nuclear lamina interactions of the Drosophila genome: DamID
GEO Series GSE20311. Drosophila melanogaster. 22 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Distribution of Drosophila insulator proteins after ecdysone treatment in Kc cells
GEO Series GSE30740. Drosophila melanogaster. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The insulator protein SU(HW) modulates nuclear lamina interactions of the Drosophila genome
GEO Series GSE20313. Drosophila melanogaster. 25 samples. Type: Genome binding/occupancy profiling by genome tiling array; Expression profiling by array.
Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [RNA-Seq]
GEO Series GSE52884. Drosophila melanogaster. 8 samples. Type: Expression profiling by high throughput sequencing.
Distribution of Drosophila insulator proteins Mod(mdg4) and L(3)mbt in Kc cells
GEO Series GSE36393. Drosophila melanogaster. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic and Proteomic Analyses of Prdm5 Reveal Interactions with Insulator Binding Proteins in Embryonic Stem Cells (RNA-seq)
GEO Series GSE51553. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner
GEO Series GSE51462. Drosophila melanogaster. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA
GEO Series GSE24126. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The insulator protein SU(HW) modulates nuclear lamina interactions of the Drosophila genome: expression
GEO Series GSE20312. Drosophila melanogaster. 3 samples. Type: Expression profiling by array.
Distribution of Drosophila insulator proteins during interphase and mitosis
GEO Series GSE32584. Drosophila melanogaster. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Distribution of Drosophila insulator proteins DREF in Drosophila Kc167 cells
GEO Series GSE39664. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Distribution of insulator proteins CP190, dCTCF, Su(Hw) and Mod(mdg4)2.2 in Drosophila S2 cells in the presence or absence of dPARP inhibitor 3AB
GEO Series GSE41354. Drosophila melanogaster. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic and Proteomic Analyses of Prdm5 Reveal Interactions with Insulator Binding Proteins in Embryonic Stem Cells (ChIP-seq)
GEO Series GSE51816. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ibf1 and Ibf2 are DNA-binding proteins required for insulator function in Drosophila
GEO Series GSE47559. Drosophila melanogaster. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array.
Distribution of Drosophila insulator protein BEAF-32 in Wing imaginal tissue (Wildtype) [ChIP-seq]
GEO Series GSE36735. Drosophila melanogaster. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomewide analysis of Insulator protein binding sites in Drosophila embryos at E0-12
GEO Series GSE16245. Drosophila melanogaster. 16 samples. Type: Genome binding/occupancy profiling by genome tiling array.
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International Brain Laboratory public data
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OpenNeuro
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