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113 results for “Integration of morphological and molecular data”
Figure 6 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 6. Variation of the live adult male paratype GZNU20220705001 of Rana zhijinensis Luo, Xiao & Zhou, sp. nov. A. Dorsolateral view; B. Dorsal view; C. Ventral view.
Figure 1 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 1. Sampling localities of Rana zhijinensis Luo, Xiao & Zhou, sp. nov., R. culaiensis, R. hanluica, and R. omeimontis in Guizhou Province, China. A. Guiguo Town, Zhijin County; B. Supu Town, Qianxi County; C. Zhujianshan Nature Reserve, Huangping County; D. Leigongshan National Nature Reserve, Leishan County.
Figure 2 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 2. Phylogenetic tree based on three mitochondrial genes and six nuclear genes. A. Maternal tree; B. Nuclear gene tree. In both phylogenetic tree, ultrafast bootstrap support (UFB) values from ML analyses/Bayesian posterior probabilities (BPP) from BI analyses are given beside nodes. Scale bars denote nucleotide substitutions per sites for mitochondrial and nuclear genes.
Figure 5 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 5. Morphological features of the live adult male holotype GZNU2018081606 of Rana zhijinensis Luo, Xiao & Zhou, sp. nov. A. Dorsolateral view; B. Dorsal view; C. Ventral view; D. Egg cluster; E. Ventral view of hand and dark gray-blackish nuptial pad; F. Ventral view of foot.
Figure 4 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 4. Haplotype networks of Rana zhijinensis Luo, Xiao & Zhou, sp. nov. and its related species constructed based on the nuclear gene sequences. Different species of the R. japonica group are shown as different colors.
Figure 3 in Description of a new species of the genus Rana (Anura: Ranidae) from western Guizhou, China, integrating morphological and molecular genetic data
Figure 3. Phylogenetic tree based on four mitochondrial genes and six nuclear genes. In this phylogenetic tree, UFB from ML analyses/ BPP from BI analyses are given beside nodes. The scale bar represents 0.03 nucleotide substitutions per site. Red lines represent species delimitation results of bPTP and BPP.
Data from: Integrating deep learning derived morphological traits and molecular data for total-evidence phylogenetics: lessons from digitized collections
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Supporting information for: Integrating morphological, molecular, and cytogenetic data for F2 sea turtle hybrids diagnosis revealed balanced chromosomal sets
<p><span>Hybridization could be considered part of the evolutionary history of many species. The hybridization among sea turtle species on the Brazilian coast is atypical and occurs where nesting areas and reproductive seasons overlap. Integrated analysis of morphology and genetics is still scarce, and there is no evidence of the parental chromosome set distribution in sea turtle interspecific hybrids. In this study, chromosome markers previously established for pure sea turtle species were combined with morphological and molecular analyses aiming to recognize genetic composition and chromosome sets in possible interspecific hybrids initially identified by mixed morphology. The data showed that one hybrid could be an F<sub>2</sub> individual among <em>Caretta caretta </em>× <em>Eretmochelys</em> <em>imbricata</em> × <em>Chelonia</em> <em>mydas</em>, and another is resulting from backcross between <em>C. caretta </em>× <em>Lepidochelys</em> <em>olivacea</em>. Native alleles of different parental lineages were reported in the hybrids, and, despite this, it was verified that the hybrid chromosome sets were still balanced. Thus, how sea turtle hybridism can affect genetic features in the long term is a concern, as the implications of the crossing-over in hybrid chromosomal sets and the effects on genetic function are still unpredictable. </span></p>
Supporting information for: Integrating morphological, molecular, and cytogenetic data for F2 sea turtle hybrids diagnosis revealed balanced chromosomal sets
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Data from: The Hercules beetles (subgenus Dynastes, genus Dynastes, Dynastidae): a revisionary study based on the integration of molecular, morphological, ecological, and geographic analyses
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FIGURE 16. Family Pilumnidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 16. Family Pilumnidae. A) Pilumnus caribaeus Desbonne, in Desbonne & Schramm, 1867 (CCDB 5075). B) Pilumnus reticulatus Stimpson, 1860 (CCDB 5083). Animals from Brazil, São Paulo state, Ubatuba. Sex: females. Scale bars (mm): A—8; B—7. Photographs by R.C. Buranelli.
FIGURE 19. Family Trichodactylidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 19. Family Trichodactylidae. A) Trichodactylus dentatus H. Milne Edwards, 1853 (CCDB 1775). B) Trichodactylus fluviatilis Latreille, 1828 (CCDB 2070). C) Trichodactylus petropolitanus (Göldi, 1886) (CCDB 2294). Animals from Brazil, São Paulo state: Ilha Comprida (A), São Sebastião (B), Caraguatatuba (C). Sex: females. Scale bars (mm): A—12; B—31; C—24. Photographs by R.C. Buranelli.
FIGURE 20. Families Panopeidae and Pseudorhombilidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 20. Families Panopeidae and Pseudorhombilidae. A) Eurypanopeus abbreviatus (Stimpson, 1860) (CCDB 5764). B) Eurytium limosum (Say, 1818) (CCDB 6369). C) Hexapanopeus caribbaeus (Stimpson, 1871) (CCDB 5658). D) Hexapanopeus paulensis Rathbun, 1930 (CCDB 5546). E) Panopeus americanus Saussure, 1857 (CCDB 5657). F) Panopeus austrobesus Williams, 1983 (CCDB 5869). G) Panopeus harttii Smith, 1869 (CCDB 6207). H) Panopeus rugosus A. Milne-Edwards, 1880 [in A. Milne-Edwards, 1873-1880] (CCDB 5040). I) Tetraxanthus rathbunae Chace, 1939 (CCDB 5873). Animals from Brazil, São Paulo state: Ubatuba (A, C, D, E, G, H), Bertioga (B), Cananéia (F), RV Soloncy Moura Expedition, Point 14 (I). Sex: male (A, B, C, D, E, F, G), female (I), juvenile (H). Scale bars (mm): A—23; B—19; C—14; D—13; E—19; F—23; G—14; H—11; I—20. Photographs by R.C. Buranelli.
FIGURE 15. Family Parthenopidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 15. Family Parthenopidae. A) Piloslambrus guerini (Brito Capello, 1871) (CCDB 1095). B) Spinolambrus fraterculus (Stimpson, 1871) (CCDB 3723). C) Spinolambrus pourtalesii (Stimpson, 1871) (CCDB 5517). Animals from Brazil, São Paulo state, Ubatuba. Sex: male (A), female (B, C). Scale bars (mm): A—30; B—21; C—28. Photographs by R.C. Buranelli.
FIGURE 14. Family Ocypodidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 14. Family Ocypodidae. A) Leptuca leptodactyla (Rathbun, in Rankin, 1898) (CCDB 5276). B) Leptuca thayeri (Rathbun, 1900) (CCDB 2540). C) Leptuca uruguayensis (Nobili, 1901) (CCDB 5275). D) Minuca burgersi (Holthuis, 1967) (CCDB 5277). E) Minuca mordax (Smith, 1870) (CCDB 5545). F) Minuca rapax (Smith, 1870) (CCDB 5296). G) Ocypode quadrata (Fabricius, 1787) (CCDB 5087). H) Ucides cordatus (Linnaeus, 1763) (CCDB 5059). Animals from Brazil, São Paulo state: Ilha Comprida (A, C, D), Ubatuba (B, F, G), Iguape (E), Cananéia (H). Sex: male (A–G), female (H). Scale bars (mm): A—7; B—13; C—7; D—11; E—13; F—16; G—27; H—42. Photographs by R.C. Buranelli.
FIGURE 12. Family Inachoididae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 12. Family Inachoididae. A) Leurocyclus tuberculosus (H. Milne Edwards & Lucas, 1842) (CCDB 5063). B) Pyromaia tuberculata (Lockignton, 1877) (CCDB 5871). C) Stenorhynchus seticornis (Herbst, 1788) (CCDB 5050). Animals from Brazil, São Paulo state: Ubatuba. Sex: male (A, B), female (C). Scale bars (mm): A—28; B—27; C—14. Photographs by R.C. Buranelli.
FIGURE 10. Family Leucosiidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 10. Family Leucosiidae. A) Persephona lichtensteinii Leach, 1817 (CCDB 5080). B) Persephona mediterranea (Herbst, 1794) (MZUSP 33205). C) Persephona punctata (Linnaeus, 1758) (CCDB 5169). Animals from Brazil, São Paulo state, Cananéia. Sex: males. Scale bars (mm): A—14; B—30; C—30. Photographs by R.C. Buranelli.
FIGURE 9. Families Homolidae and Hymenosomatidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 9. Families Homolidae and Hymenosomatidae. A) Homola barbata (Fabricius, 1793) (CCDB 5874). B) Teramnonotus monodi Tavares & Santana, 2015 (CCDB 5628). Animals from Brazil, São Paulo state: RV Soloncy Moura Expedition, Point 14 (A), Cananéia (B). Sex: females. Scale bars (mm): A—21; B—4. Photographs by R.C. Buranelli.
FIGURE 18. Families Ovalipidae and Portunidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 18. Families Ovalipidae and Portunidae. A) Ovalipes trimaculatus (De Haan, 1833 [in De Haan, 1833–1850]) (CCDB 5863). B) Achelous spinicarpus (Stimpson, 1871) (CCDB 5782). C) Achelous spinimanus (Latreille, 1819) (CCDB 5285). D) Arenaeus cribrarius (Lamarck, 1818) (CCDB 4891). E) Callinectes bocourti A. Milne-Edwards, 1879 [in A. Milne-Edwards, 1873- 1880] (CCDB 5485). F) Callinectes danae Smith, 1869 (ULLZ 15989). G) Callinectes ornatus Ordway, 1863 (CCDB 5168). H) Callinectes sapidus Rathbun, 1896 (CCDB 5082). I) Charybdis hellerii (A. Milne-Edwards, 1867) (CCDB 5253). J) Cronius ruber (Lamarck, 1818) (CCDB 4892). J) Animals from Brazil, São Paulo state: Ubatuba (A, C, E, F, I, J), Soloncy Moura Expedition, Point 8 (B), Cananéia (D, G, H). Sex: male (A, B, C, D, F, G, I, J), female (E, H). Scale bars (mm): A—36; B—25; C—18; D– 5; E—40; F—52; G—35; H—65; I—25; J—35. Photographs by R.C. Buranelli (A—D, F—J), D. Felder (F).
FIGURE 7. Family Sesarmidae. A in Checklist of decapod crustaceans from the coast of the São Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
FIGURE 7. Family Sesarmidae. A) Aratus pisonii (H. Milne Edwards, 1837) (CCDB 4890). B) Armases angustipes (Dana, 1852) (CCDB 5621). C) Armases rubripes (Rathbun, 1897) (CCDB 5653). D) Sesarma rectum Randall, 1840 (CCDB 5081). Animals from Brazil, São Paulo state: Cananéia (A), Ubatuba (B), Ilha Comprida (C, D). Sex: male (A, C), female (B, D). Scale bars (mm): A—12; B—11; C—8; D—20. Photographs by R.C. Buranelli.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.