Find research datasets worth reusing

FIGURE 5 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 5: Scatterplot of the first two principal component scores (PCs) from acoustic traits of six populations of P. giarettai. Yellow (Curvelo; type locality); purple (Chapada Gaúcha); green (Coromandel); red (Buritis); blue (Buritizeiro); pink (Unaí).

FIGURE 3 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 3: Advertisement call of P. giarettai from the type locality (Curvelo, Minas Gerais). From top to bottom: oscillogram section (ca. 1.6 s) depicting calling pattern, waveform, spectrogram, and power spectrum of the second advertisement from oscillogram section. Sound energy with relative amplitude below 40 dB was clipped to zero dB to remove background noise from power spectrum.

FIGURE 2 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 2: Adult specimens of P. giarettai in life from: Above – Parque Nacional Grande Sertão Veredas, Chapada Gaúcha, Minas Gerais (voucher male AAG-UFU 1920: CRC = 14.6 mm); Below – Coromandel (female AAG-UFU 3566: CRC 18.8 mm).

FIGURE 4 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 4: Advertisement call of P. giarettai from the Parque Nacional Grande Sertão Veredas (Chapada Gaúcha, Minas Gerais). From top to bottom: oscillogram section (ca. 1.6 s) depicting calling pattern, waveform, spectrogram, and power spectrum of the second advertisement from oscillogram section. Sound energy with relative amplitude below 40 dB was clipped to zero dB to remove background noise from power spectrum.

FIGURE 6 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 6: Typical breeding habitat of P. giarettai: a permanent pond associated with a Buriti palm grove marsh at the Parque Nacional Grande Sertão Veredas (Municipality of Chapada Gaúcha), northwestern Minas Gerais, southeastern Brazil.

FIGURE 1 in INTRASPECIFIC VARIATION IN ACOUSTIC TRAITS AND BODY SIZE, AND NEW DISTRIBUTIONAL RECORDS FOR PSEUDOPALUDICOLA GIARETTAI CARVALHO, 2012 (ANURA, LEPTODACTYLIDAE, LEIUPERINAE): IMPLICATIONS FOR ITS CONGENERIC DIAGNOSIS

FIGURE 1: Distribution map of Pseudopaludicola giarettai. Star (Type locality: Curvelo, MG); Circles (localities in Minas Gerais): 1 (Buritis), 2 (Chapada Gaúcha), 3 (Unaí), 4 (Buritizeiro), 5 (Coromandel), 6 (Conceição do Mato Dentro; Pimenta et al., 2014), 7 (Muriaé; Santana et al., 2009); Triangle (Flores de Goiás, GO). MG = Minas Gerais; GO = Goiás.

publicJun 2025View details →

dryad40/100

Intraspecific functional trait variation and coordination in Schizachyrium scoparium

Open the record for dataset details and reuse information.

opencc-zeroJul 2020View details →

Data from: Along with intraspecific functional trait variation, individual performance is key to resolving community assembly processes

<ol> <li>Species contributing high proportions to community biomass strongly influence ecosystem processes within the community. Studies have shown that dominant species may serve as nurse plants, helping to ensure biomass stability of the subordinate species under stress conditions. The question is widely debated as to whether either niche differentiation or neutral processes drive the net outcome of plant interactions within a subordinate plant community. To answer this question, requires precise estimates of individual variation in functional traits and performance.</li> <li>In a five-year mesocosm experiment, the functional responses of a subordinate plant community to the removal of the dominant species were evaluated across two drought-stress scenarios. Small scale (i.e., large pots) wetland communities were constructed comprising one dominant species (Carex elata) and three subordinate species. Removal of the dominant species allowed evaluation of the net effects of drought and interspecific interactions. We estimated the functional divergences for three traits (specific leaf area, leaf dry matter content and height growth allocation) and compared these with performance differences quantified individually. This enabled distinctions to be made between deterministic (i.e., niche differentiation) and neutral processes driving the drought response of the subordinate community.</li> <li>We showed that the dominant species decreased relative performance differences within the subordinate plant community under conditions of permanent drought stress. These changes were associated with the convergence of traits related to resource acquisition and growth. The dominant species equalised species performance differences by supressing relatively drought-tolerant species with low competitive ability and by supporting the less drought-tolerant species with relatively high competitive ability. Meanwhile, under conditions of interannual drought, the subordinate species likely coexisted due to differentiation in resource-use strategies and the interaction with the dominant species.</li> <li>Inclusion of individual variation in performance with a functional trait approach provides valuable insights into the processes structuring plant communities. Ours is the first study to provide evidence that subordinate species exposed to drought may coexist via neutral processes arising from their interactions with the dominant species, leading to functional convergence of traits associated with the trade-off between stress tolerance and competitive ability.</li> </ol>

zenodo36/100

Data and scripts for "Joint species-trait distribution modelling: The role of intraspecific trait variation in community assembly"

The README explains how to reproduce the analyses presented in the paper "Joint species-trait distribution modelling: The role of intraspecific trait variation in community assembly" by Abrego et al. The input data for the script pipeline is the file “Kilpisjarvi_plant_data.csv”. This file includes the data on the plants and their traits in the long format. Hence, each row of the data matrix corresponds to measurements on one plant species in one study plot. The joint species-trait distribution modelling (JSTDM) pipeline that analyses these data consists of the following R-scripts. ·        S1_define_JSTDM_models.R. This script defines the JSDTM models (null model and environmental model) that include five response types for each species: the presence-absence, abundance conditional on presence, and the plot-level trait values of specific leaf area (SLA), leaf area (LA) and mean height (MH). The model is defined in the Hierarchical Modelling of Species Communities (HMSC) framework utilizing the R-package Hmsc. The models are saved in the file “unfitted_models.RData”. ·        S2_fit_models.R. This script loads the unfitted models and fits them using the posterior sampling methods implemented in the R-package Hmsc. The models are fitted with increasing thinning until thin=100, which value was used to generate the results of the paper. The fitted models are saved in the file "models_thin_100_samples_250_chains_4.Rdata". ·        S3_plot_Omega_matrices.R. This script loads the fitted models and plots the association matrices (Fig. 2 of the paper). The csv file containing the values used to construct Fig. 2 is also given (figure2Cdata.csv and figure2Ddata.csv). ·        S4_show_VP_Beta_Gamma.R. This script loads the fitted models and extracts information on the variance partitionings (VP; Figs. S3 and S4 of the paper), the relationships between response types and environmental predictors (beta; Fig. S2 of the paper), and the relationships between response types and species-level traits (gamma; Fig. S5 of the paper). The csv file containing the values used to construct Fig. S2 (figureS2Adata.csv and figureS2Bdata.csv), Fig. S3 (figureS3data.csv), Fig. S4 (figureS4data.csv) and Fig S5 (figureS5data.csv) are also given. ·        S5_conditional_cross_validation.R. This script performs 10-fold cross validation to the data to test the predictive power related to the modelled plant traits. The script performs both regular (unconditional) cross-validation where all data are masked for the test fold, and conditional cross-validation where only the trait data (but not the abundance data) are masked for the test fold. ·        S6_show_conditional_cross_validation_results.R. This script plots the results of cross-validation (Fig. 3 of the paper). The csv file containing the values used to construct Fig. 3 is also given (figure3Adata.csv and figure3Bdata.csv). ·        S7_scenario_predictions.R. This script performs the scenario simulations described and shown in Fig. 4 of the paper. The csv file containing the values used to construct Fig. 4 is also given (figure4Bdata.csv and figure4Cdata.csv).

opencc-by-4.0May 2024View details →

opencc-zeroJan 2024View details →

Data from: Intraspecific leaf trait variation mediates edge effects on litter decomposition rate in fragmented forests

There is strong trait dependence in species-level responses to environmental change and their cascading effects on ecosystem functioning. However, there is little understanding of whether intraspecific trait variation (ITV) can also be an important mechanism mediating environmental effects on ecosystem functioning. This is surprising, given that global change processes such as habitat fragmentation and the creation of forest edges drive strong trait shifts within species. On 20 islands in the Thousand Island Lake, China, we quantified intraspecific leaf trait shifts of a widely distributed shrub species, Vaccinium carlesii, in response to habitat fragmentation. Using a reciprocal transplant decomposition experiment between forest edge and interior on 11 islands with varying areas, we disentangled the relative effects of intraspecific leaf trait variation vs. altered environmental conditions on leaf decomposition rates in forest fragments. We found strong intraspecific variation in leaf traits in response to edge effects, with a shift towards recalcitrant leaves with low specific leaf area and high leaf dry matter content from forest interior to the edge. Using structural equation modelling, we showed that such intraspecific leaf trait response to habitat fragmentation had translated into significant plant afterlife effects on leaf decomposition, leading to decreased leaf decomposition rates from the forest interior to the edge. Importantly, the effects of intraspecific leaf trait variation were additive to and stronger than the effects from local environmental changes due to edge effects and habitat loss. Our experiment provides the first quantitative study showing that intraspecific leaf trait response to edge effects is an important driver of the decrease in leaf decomposition rate in fragmented forests. By extending the trait-based response-effect framework towards the individual level, intraspecific variation in leaf economics traits can provide the missing functional link between environmental change and ecological processes. These findings suggest an important area for future research on incorporating ITV to understand and predict changes in ecosystem functioning in the context of global change.

opencc-zeroApr 2022View details →

Intraspecific variation in plant economic traits predicts trembling aspen resistance to a generalist insect herbivore

Patterns of trait expression within some plant species have recently been shown to follow patterns described by the leaf economics spectrum paradigm. Resistance to herbivores is also expected to covary with leaf economics traits. We selected multiple mature Populus tremuloides genotypes from a common garden to assess whether aspen leaf economics patterns follow those observed among species globally. We also evaluated leaf economics strategies in the context of insect resistance by conducting bioassays to determine the effects of plant traits on preference and performance of Lymantria dispar. We found that: 1) intraspecific trait patterns of P. tremuloides parallel those exhibited by the interspecific leaf economics spectrum, 2) herbivores preferred leaves from genotypes with resource-acquisitive strategies, and 3) herbivores also performed best on genotypes with resource-acquisitive strategies. We conclude that a leaf economics spectrum that incorporates defense traits is a useful tool for explaining intraspecific patterns of variation in plant strategies, including resistance to herbivores.

opencc-zeroMay 2022View details →

Data for: Substantial intraspecific trait variation across a hydrological gradient in northern Australian fishes

Trait-based models of ecological communities and ecosystem functioning often fail to account for intraspecific variation in functional traits, assuming that intraspecific variability is negligible compared to interspecific variability. However, this assumption remains poorly tested across vertebrate animals where past studies routinely describe species according to mean trait values without explicit consideration of individual trait variability. We assessed nine functional traits for 4,254 individuals belonging to 15 freshwater fish species from 11 families in Northern Australia, including: body elongation, body shape, caudal peduncle throttle, eye size, eye position, gape shape, gape size, mouth position and pectoral fin length. We quantified the extent and geography of intraspecific trait variability and its relationship with riverine hydrologic regimes using a structured sampling design. Using a combination of single- and multi-trait analyses, we demonstrate that intraspecific trait variability can contribute up to 70% of the total trait variability depending on the attribute considered and averaged 31% across all traits. The magnitude of intraspecific trait variability also varied across the hydrological permanency gradient. Fish assemblages in intermittent streams subjected to frequent environmental disturbance had high intraspecific trait variability, most likely due to strong abiotic filters limiting interspecific divergence. Conversely, assemblages in perennial rivers with less harsh environmental filters but with a larger pool of species expressed lower intraspecific trait variability: this is most likely due to stronger resource competition (biotic filter), which promotes specialization of resource use and, consequently, interspecific divergence. Our study provides the first evidence of intraspecific trait variability driven by a disturbance gradient for an animal group and points to the need for additional research into the functional importance of intraspecific variability in animal ecology. A better understanding of the patterns, drivers, and implications of intraspecific trait variability will help guide mechanistic-based predictions of the effects of environmental changes on community assemblage and ecosystem processes.

opencc-zeroJun 2022View details →

Intraspecific trait variation alters the outcome of competition in freshwater ciliates

Trait variation among heterospecific and conspecific organisms may substantially affect community and food web dynamics. While the relevance of competition and feeding traits have been widely studied for different consumer species, studies on intraspecific differences are more scarce, partly owing to difficulties in distinguishing different clones of the same species. Here, we investigate how intraspecific trait variation affects the competition between the freshwater ciliates Euplotes octocarinatus and Coleps hirtus in a nitrogen-limited chemostat system. The ciliates competed for the microalgae Cryptomonas sp. (Cry) and Navicula pelliculosa (Nav), and the bacteria present in the cultures over a period of 33 days. We used monoclonal Euplotes and three different Coleps clones (Col 1, Col 2, Col 3) in the experiment that could be distinguished by a newly developed rDNA-based molecular assay based on the internal transcribed spacer (ITS) regions. While Euplotes feeds on Cry and on bacteria, the Coleps clones cannot survive on bacteria alone but feed on both Cry and Nav with clone-specific rates. Experimental treatments comprised two-species mixtures of Euplotes and one or all of the three different Coleps clones, respectively. We found intraspecific variation in the traits "selectivity" and "maximum ingestion rate" for the different algae to significantly affect the competitive outcome between the two ciliate species. As Nav quickly escaped top-down control and likely reached a state of low food quality, ciliate competition was strongly determined by the preference of different Coleps clones for Cry as opposed to feeding on Nav. In addition, the ability of Euplotes to use bacteria as an alternative food source strengthened its persistence once Cry was depleted. Hence, trait variation at both trophic levels co-determined the population dynamics and the outcome of species competition. --

opencc-zeroJun 2022View details →

Size-dependent intraspecific variation in wood traits has little impact on aboveground carbon estimates in a tropical forest landscape

There is increasing evidence that intraspecific trait variation plays a role in governing rates of ecosystem functioning. While wood traits such as wood specific gravity (WSG) and wood carbon concentration (WCC) are key drivers of forest aboveground carbon (AGC) stocks, the sources of intraspecific variation in these wood traits and the consequences of this variation on AGC are poorly known, especially in the tropics. Here, we investigated intraspecific variation in wood specific gravity (WSG) and wood carbon concentration (WCC) from 556 individual trees belonging to 15 species that well characterize different successional stages of seasonal evergreen forests in Southeast Asia. Specifically, we tested the contribution of individual or species characteristics (tree size, growth rate and regeneration guilds) and local environmental conditions (topographic wetness index and successional stages) to intraspecific variation in WSG and WCC, and assessed the consequences of intraspecific variation in these wood traits on AGC estimates in 14 permanent forest plots established along a successional gradient in Khao Yai National park, Thailand. We found that tree size was the main driver of intraspecific variation in WSG and WCC as tree sizes increased from 10−100 cm in diameter, WSG increased by 7.3%, while WCC increased by 2.4% in heartwood, 1.6% and 2.7% in sapwood without and with volatile carbon included. There was no effect of the topographic wetness and other local environment condition in wood traits led to a slight overestimation of AGC in young secondary forests (+0.09 to +1.29%) and a small underestimation in older forests (-0.86 to -2.87%), but overall AGC estimates (13 of 14 forest plots) remained within error margins (the 95% interval). Our study provides evidence that tree size variation translates into intraspecific variability in wood traits, whereas local environmental conditions related to topography successional stages had no effect on wood trait variability. While size-dependent variation in WSG and WCC have largely been undocumented and thus ignored in forest carbon assessment approaches, we highlight that it has a limited impact on AGC estimates, indicating that it does not invalidate current forest carbon stock estimation approaches.

opencc-zeroSep 2022View details →

Intraspecific trait variation in a dryland tree species corresponds to regional climate gradients

Aim: Intraspecific trait variation is fundamental to understanding a species' adaptive capacity. Assessing phenotypic variation at different ecological scales is useful for evaluating species' vulnerability to changing environmental conditions. Here we quantify the ecological scale of variation of phenotypic functional traits for a widespread dryland tree species in the western United States, Pinus monophylla, and evaluate the strength of trait-environment relationships across spatial gradients and in response to interannual variability in weather conditions. Location: Western United States Taxon: Conifer tree (Pinaceae): Pinus monophylla Methods: Nine reproductive and foliar morphological traits were measured from 23 sampling locations in nine mountain ranges, stratified across broad-scale gradients of precipitation timing and quantity and local gradients of elevation. We partitioned trait variation within and among nested ecological scales (mountain range, site, tree, and tree growth year). We then used multivariate methods to quantify the association between environmental variables and ecological trade-offs associated with both reproductive and foliar traits. Results: Most variation was explained at the scale of individual trees (18–46%) and between growth years (20–30%), with smaller but variable contributions at the scale of sites (8–25%) and mountain ranges (0–15%). Trait values had low correlation with environmental variables (13%); however, 94% of the trait-environment covariance was explained by two major axes of variation: (1) the drought-stress gradient covarying with reproductive traits, and (2) precipitation patterns covarying with foliar morphology. Main conclusions: High levels of individual trait variation indicate within-population adaptive capacity. Consistent relationships among range-wide patterns of foliar and reproductive traits and broad-scale climate gradients provide indirect evidence of local adaptation and may inform seed sourcing for restoration or the potential for assisted migration efforts. Quantification of intraspecific trait variation across multiple ecological scales is important for understanding the potential climate change response of dryland tree species.

opencc-zeroOct 2022View details →

Mycorrhizae influence plant vegetative and floral traits and intraspecific trait variation

Premise. Arbuscular mycorrhizal fungi (AMF) can strongly influence host plant vegetative growth, but less is known about AMF effects on other plant traits, the relative impacts of AMF on vegetative growth versus floral traits, or AMF-induced intraspecific variation in traits. Key results. AMF species varied in their effects on host plants, from negative to positive effects. AMF often had inconsistent effects on vegetative biomass versus floral traits, and therefore quantifying one or the other may provide a misleading representation of potential AMF effects. AMF treatments generated key variation in plant traits, especially floral traits, with potential consequences for plant-pollinator interactions. Given increased intraspecific trait variation in Linum lewisii plants across AMF species compared to uninoculated individuals or single AMF treatments, local AMF diversity and their host plant associations may scale up to influence community-wide patterns of trait variation and species interactions. Conclusions. These results have implications for predicting how aboveground communities are affected by belowground communities. Including AMF effects on not just host plant biomass but also functional traits and trait variation will deepen our understanding of community structure and function, including pollination.

publicJan 2020View details →

Data from: Species interactions and environmental context affect intraspecific behavioural trait variation and ecosystem function

Open the record for dataset details and reuse information.

publicJan 2020View details →

Inter- and intraspecific trait variation shape multidimensional trait overlap between two plant invaders and the invaded communities

Open the record for dataset details and reuse information.

publicOct 2022View details →

Mycorrhizae influence plant vegetative and floral traits and intraspecific trait variation

Open the record for dataset details and reuse information.