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4 results for “LTEE”
Metabolic and demographic data from the LTEE
<p>These data are the metabolic data and demographic data underlying the paper, "<strong>Long-term experimental evolution decouples size and production costs in <em>Escherichia coli</em></strong><span>". </span></p>
Metabolic and demographic data from the LTEE
Open the record for dataset details and reuse information.
LTEE-INSeq-processed-data
<p>This repository contains processed data from transposon sequencing (INSeq) of the ancestral strain (REL606) and clones sampled at 2,000 and 15,000 generations for the Ara+2 and Ara-1 lineages from the Lenski's Long-Term Evolution Experiment (LTEE). Files contain the number of reads per data point for genome-wide insertion mutants that were subjected to bulk competition under similar conditions to those of the LTEE. Raw sequencing reads are available from the NCBI BioProject database (PRJNA979973). Scripts for analyses are available from GitHub (https://github.com/ACouce/LTEE2022).</p>
LTEE-TnSeq-processed-data
<p>This repository contains processed data from transposon sequencing (TnSeq) and whole genome sequencing (WGS) of the ancestral strains and evolved clones at 50K from the Lenski Long-Term Evolution Experiment (LTEE). It comprises TnSeq mutant trajectory counts, and output files from WGS analysis using breseq and samtools. </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.