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ShareScore release 0.9.0
Dataset results
2 results for “Layer-fMRI”
Second CMRR cdr workshop: Layer-fMRI analysis across pipelines
<p>This repository contain workshop material of cortical depth resolved (cdr) fMRI, aka layer-fMRI Oct 10th-11th 2023. Official website is: <a href="https://sites.google.com/umn.edu/2023-minnesota-workshop/training/depth-resolved-layer-fmri ">https://sites.google.com/umn.edu/2023-minnesota-workshop/training/depth-resolved-layer-fmri</a>.</p><p>The goal of this hands-on workshop was to:</p><ul><li>Talk about the stuff that is not in the paper!</li><li>Show you the "ugly" parts of layer fMRI</li><li>Provide enough knowledge to allow analyzing layer data from beginning to end</li><li>Highlight the cool features of some of the most commonly used software</li></ul><p>The workshop featured 4 independent pipelines of layer-fMRI analysis:</p><ul><li><a href="https://muckli.psy.gla.ac.uk/yulia-lazarova/"><strong>Yulia Lazarova</strong></a>: BrainVoyager</li><li><a href="https://www.martinos.org/investigator/anna-blazejewska/"><strong>Anna Blazejewska</strong></a>: Freesurfer</li><li><a href="https://cmn.nimh.nih.gov/Renzo"><strong>Renzo Huber</strong></a>: LayNii AFNI</li><li><a href="https://cla.umn.edu/about/directory/profile/caolman"><strong>Cheryl Olman</strong></a>: Distrortion correction and registration</li></ul>
Supplementary data to 'acquisition and processing methods of whole-brain layer-fMRI VASO and BOLD: The Kenshu dataset'
<p>Supplemental results of our analysis</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.