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Dataset results
24 results for “Legacy Material”
MCR LTER: Coral Reef: Material legacy disturbance type model; data for Kopecky et al., 2023 Ecology
This data package contains the code necessary to create a mathematical model of coral reef recovery dynamics following different types and intensities of disturbances that either remove dead coral skeletons (e.g., tropical storms) or leave standing dead skeletons (e.g., coral bleaching) and run associated analyses. We explored the sensitivity of the model to variation in key parameters, such as the strength of herbivory, and the degree to which dead skeletons protect algae from herbivory. Further, we assessed disturbance intensities and values of these parameters that lead to shifts between coral and macroalgae-dominated reefs. This code was published in Ecology and were a part of the thesis of K. Kopecky (2023). Analyses and full methods descriptions of this model can be found in the manuscript “Material legacies can degrade resilience: Structure-retaining disturbances promote regime shifts on coral reefs” (DOI: https://doi.org/10.1002/ecy.4006). No novel data were used or generated in this study. This manuscript uses data collected by the U.S. National Science Foundation's (NSF) Moorea Coral Reef Long Term Ecological Research (MCR LTER) site under Grant No. OCE 2224354 (and earlier awards). Additional financial support to the MCR LTER site was provided through a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2023).
Supplementary material 3: World Spider Catalog Bibliographic Data: Treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
List of journal/publisher by ranked by treatment count exported from the World Spider Catalog 14 October 2014 with total treatments by source, cumulative treatments, and cumulative proportion of treatments.
Supplementary material 2: World Spider Catalog Bibliographic Data: Publications from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Ranked list of journal/publisher exported from the World Spider Catalog 14 October 2014 with total articles by source, cumulative articles, and cucmulative proportion of articles.
Supplementary material 12: Collector dashboard: specimens collected by Y. M. Marusik from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected by Y. M. Marusik. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 9: Integrated legacy literature and prospective publishing dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 8: Integrated legacy literature and prospective publishing dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 5: Legacy literature dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 16: Author dashboard: Jeremy A. Miller from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing content from articles by Jeremy A. Miller (lead author). When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 4: Legacy literature dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 1: Global Biodiversity Information Facility: Taxa and Records from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
All records in GBIF with taxonomic ranks (kingdom, phylum, class, order, and species), basis of record (e.g., preserved specimen), and count of records, exported from GBIF on 7 December 2014.
Supplementary material 11: Collecting country dashboard: specimens collected in Russia from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected in Russia. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 10: Institutional collection dashboard: specimens from the collection of the California Academy of Sciences (CAS) from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens from the collection of the California Academy of Sciences. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 15: Species dashboard: Tenuiphantes tenuis from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens of the linyphiid spider Tenuiphantes tenuis. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 7: Prospective publishing dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 5 articles published in Biodiversity Data Journal containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 14: Treatment dashboard: content from Pardosa zyuzini treatment in Kronestedt and Marusik (2011) from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing content from one treatment: Pardosa zyuzini in Kronestedt and Marusik (2011). When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 13: Article dashboard: content from Kronestedt and Marusik (2011) from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing content from one article, Kronestedt and Marusik 2011. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 6: Prospective publishing dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 5 articles published in Biodiversity Data Journal containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 17: Generating Interactive Dashboard Charts Based on Plazi Treatment Data from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
A brief explanation of how to create and customize interactive charts using data on Plazi.
Supplementary material 1 from: Xu Z, Guo X, Skálová H, Hu Y, Wang J, Li M, Guo W (2024) Shift in the effects of invasive soil legacy on subsequent native and invasive trees driven by nitrogen deposition. NeoBiota 93: 25-37. https://doi.org/10.3897/neobiota.93.108923
Supplement of methods of results
Figure 10 from: Chatzimanolis S (2014) Darwin's legacy to rove beetles (Coleoptera, Staphylinidae): A new genus and a new species, including materials collected on the Beagle's voyage. ZooKeys 379: 29-41. https://doi.org/10.3897/zookeys.379.6624
Figure 10 - Original BMNH labels for the holotype of Darwinilus sedarisi Chatzimanolis, sp. n. Image Copyright Natural History Museum (London).
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OpenNeuro
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