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19 results for “Lepus timidus”
Рис. 2. НижнечеΛюстные кости из шурфа Ш-1, кв. Б-3: А — собоΛь (Martes zibellina); Б — заяц-беΛяк (Lepus timidus); В — пищухи (Ochotona sp.) Fig. 2. Mandibular bones from D-1, sq. B-3: A — sable (Martes zibellina); Б — white hare (Lepus timidus); В — pikas (Ochotona sp.) in New data on the Holocene vertebrate fauna of the Middle Lena and Aldan Rivers basins (Yakutia) based on the materials from archaeological sites Jampa, Kuznets I, II Daban-Yuryakh, and Buor-Khaya I, II, III
Рис. 2. НижнечеΛюстные кости из шурфа Ш-1, кв. Б-3: А — собоΛь (Martes zibellina); Б — заяц-беΛяк (Lepus timidus); В — пищухи (Ochotona sp.) Fig. 2. Mandibular bones from D-1, sq. B-3: A — sable (Martes zibellina); Б — white hare (Lepus timidus); В — pikas (Ochotona sp.)
Fig. 3 in Gastrointestinal parasite infestation in the alpine mountain hare (Lepus timidus varronis): Are abiotic environmental factors such as elevation, temperature and precipitation affecting prevalence of parasite species?
Fig. 3. Parasite infestation in faeces and ambient temperature. Correlation between parasite infestation in Alpine mountain hare faeces (n = 52) and average, minimal, and maximal temperature found in Vorarlberg (Austria) during the years 2014 and 2015. Count visualises the number of faecal samples. See text for details on statistics.
Fig. 2 in Gastrointestinal parasite infestation in the alpine mountain hare (Lepus timidus varronis): Are abiotic environmental factors such as elevation, temperature and precipitation affecting prevalence of parasite species?
Fig. 2. Number of parasite types per faeces and severity of parasitic infestation. Correlation between number of parasite types per Alpine mountain hare faeces and severity of parasitic infestation (n = 28) found in Vorarlberg (Austria) during the years 2014 and 2015. Count visualises the number of faecal samples. The severity of infestation is indicated by scattered ((+)), low (+), intermediate (++), and high (+++) infestation. See text for details on statistics.
Fig. 2 in Identification of the tapeworm Mosgovoyia pectinata (Anoplocephalidae) in Faroese mountain hares (Lepus timidus)
Fig. 2. Bayesian inference tree of phylogenetic relationships of Mosgovoyia spp. and other anoplocephalid (s. s.) cestodes of mammals based on sequences of the mitochondrial nad1 gene. The new sequence from Lepus timidus from Faroes in bold. Posterior probabilities of the Bayesian analysis (first value) and bootstrap support of the Maximum likelihood (ML) analysis (second value) are indicated at nodes. The inclusion of Neoctenotaenia ctenoides in the "lagomorph clade" is not supported by either of the phylogenetic methods. Hymenolepis diminuta and Arostrilepis sp. (Hymenolepididae) were used as outgroups (not shown).
Fig. 1 in Identification of the tapeworm Mosgovoyia pectinata (Anoplocephalidae) in Faroese mountain hares (Lepus timidus)
Fig. 1. Geographic location of the Faroe Islands and spatial distribution of mountain hares on the islands (green colour). Tapeworms were collected from four hares, hunted in four villages: 1) Vestmanna, 2) Eiði, 3) Kollafjørður and 4) Viðareiði. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Data from: An annotated draft genome of the mountain hare (Lepus timidus)
<p>Hares (genus Lepus) provide clear examples of repeated and often massive introgressive hybridization and striking local adaptations. Genomic studies on this group have so far relied on comparisons to the European rabbit (Oryctolagus cuniculus) reference genome. Here, we report the first de novo draft reference genome for a hare species, the mountain hare (Lepus timidus), and evaluate the efficacy of whole-genome re-sequencing analyses using the new reference versus using the rabbit reference genome. The genome was assembled using the ALLPATHS-LG protocol with a combination of overlapping pair and mate-pair Illumina sequencing (77x coverage). The assembly contained 32,294 scaffolds with a total length of 2.7 Gb and a scaffold N50 of 3.4 Mb. Re-scaffolding based on the rabbit reference reduced the total number of scaffolds to 4,205 with a scaffold N50 of 194 Mb. A correspondence was found between 22 of these hare scaffolds and the rabbit chromosomes, based on gene content and direct alignment. We annotated 24,578 protein coding genes by combining ab-initio predictions, homology search, and transcriptome data, of which 683 were solely derived from hare-specific transcriptome data. The hare reference genome is therefore a new resource to discover and investigate hare-specific variation. Similar estimates of heterozygosity and inferred demographic history profiles were obtained when mapping hare whole-genome re-sequencing data to the new hare draft genome or to alternative references based on the rabbit genome. Our results validate previous reference-based strategies and suggest that the chromosome-scale hare draft genome should enable chromosome-wide analyses and genome scans on hares.</p>
Data from: Camera traps reveal seasonal variation in activity and occupancy of the Alpine mountain hare (Lepus timidus varronis)
<p>Mountain hare is a cold-adapted species threatened by climate change, but despite its emblematic nature, our understanding of the causes of population decline remains limited. Camera traps are increasingly used in ecology as a tool for monitoring animal populations at large spatial and temporal scales. In mountain environments where field work is constrained by difficult access and harsh conditions, camera traps constitute a promising tool for surveying rare and elusive species such as the mountain hare. Our study explored the use of camera traps as a tool for studying seasonal habitat occupancy and daily activity patterns of the mountain hare, in order to carry out long-term monitoring of populations. We installed 46 camera traps along elevation gradients in the Mont-Blanc massif (France) from January 2018 to June 2022. We measured habitat variables at each camera trap site in order to define vegetation composition and habitat structure. We performed multi-season and single-season occupancy models to respectively describe habitat occupancy of the mountain hare throughout the year and identify the environmental variables influencing mountain hare presence during the breeding season. Mountain hares occupy coniferous forest in winter, and then switch to mixed areas of shrubland and grassland above treeline in spring and the beginning of summer. In spring, occupancy probability of the mountain hare increases with relative cover of mixed low shrub and herbaceous layer (i.e. the 10-40 cm vegetation layer), suggesting a link to food resources and protection from predation. Our results also confirm the nocturnal and crepuscular activity of the mountain hare during the breeding season, and strictly nocturnal activity in winter. Our results demonstrate the efficiency of camera traps as tools for monitoring mountain hare habitat occupancy in mountain environments and underline the importance of diverse habitat mosaics for the preservation of the species.</p>
Calculation of times relative to sunset and sunrise for mountain hare Lepus timidus camera trap records Scotland (S1b)
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Calculation of detection rate for camera trap records of mountain hare Lepus timidus Scotland (S2)
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Data from: Camera traps reveal seasonal variation in activity and occupancy of the Alpine mountain hare (Lepus timidus varronis)
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Data from: An annotated draft genome of the mountain hare (Lepus timidus)
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Camera trap photographs of mountain hare Lepus timidus per month Scotland (S1A)
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On following pages: 51. Tehuantepec Jackrabbit (Lepus flavigularis); 52. Iberian Hare (Lepus granatensis); 53. European Hare (Lepus europaeus); 54. Broom Hare (Lepus castroviejoi); 55. Corsican Hare (Lepus corsicanus); 56. White-tailed Jackrabbit (Lepus townsendii); 57. Arctic Hare (Lepus arcticus); 58. Alaskan Hare (Lepus othus); 59. Mountain Hare (Lepus timidus); 60. Japanese Hare (Lepus brachyurus); 61. Manchurian Hare (Lepus mandshuricus); 62. Korean Hare Lepus coreanus); 63. Chinese Hare (Lepus sinensis). in Leporidae
On following pages: 51. Tehuantepec Jackrabbit (Lepus flavigularis); 52. Iberian Hare (Lepus granatensis); 53. European Hare (Lepus europaeus); 54. Broom Hare (Lepus castroviejoi); 55. Corsican Hare (Lepus corsicanus); 56. White-tailed Jackrabbit (Lepus townsendii); 57. Arctic Hare (Lepus arcticus); 58. Alaskan Hare (Lepus othus); 59. Mountain Hare (Lepus timidus); 60. Japanese Hare (Lepus brachyurus); 61. Manchurian Hare (Lepus mandshuricus); 62. Korean Hare Lepus coreanus); 63. Chinese Hare (Lepus sinensis).
Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831)
<p class="MsoNormal">We provide the first whole genome sequences from three specimens of the mountain hare subspecies the heath hare (<em>Lepus timidus sylvaticus</em>), along with a sample subset of two mountain hares (<em>Lepus timidus timidus</em>) and two brown hares (<em>Lepus europaeus</em>) from Sweden. The heath hare has a unique grey winter pelage as compared to other mountain hares (white) and brown hares (mostly brown), and face regional extinction, likely due to competitive exclusion from the non-native brown hare. Whole genome resequencing from the eight hare specimens was mapped to the <em>Lepus timidus</em> pseudoreference genome and used for detection of 11,363,883 polymorphic nucleotide positions. We show that genomic data can be useful for addressing local adaptations and conservation status of mountain hares and brown hares in Sweden, including unique subspecies.</p>
Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831)
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Fig. 1 in Gastrointestinal parasite infestation in the alpine mountain hare (Lepus timidus varronis): Are abiotic environmental factors such as elevation, temperature and precipitation affecting prevalence of parasite species?
Fig. 1. Frequency of the number of parasite types. Frequency of the number of parasite types detected per Alpine mountain hare faeces in percent (n = 52) in Vorarlberg (Austria) during the years 2014 and 2015 within an altitudinal range of 1551–2073 m a.s.l.
Data from: A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)
The management of hunted species is challenging, as it must conciliate the conservation of species and their sustainable exploitation. Non-genetic tools are widely used in this context but they may present limitations notably when species can hybridize or when large-scale spatial monitoring is required to establish optimal management actions. This is why genetic tools have been more and more integrated in wildlife management practices. However, the markers proposed are often amplified in small multiplexes when larger ones could allow to better cope with the small quantities of DNA obtained with non-invasive sampling methods. Here, we propose a unique multiplex of 12 autosomal microsatellite markers for the study of two hare species that exist in sympatry in some areas in Europe and are hunted notably in France: the brown hare Lepus europaeus and the mountain hare L. timidus. We tested 17 markers previously used in these two species or other lagomorph species, from which 12 were included in this single multiplex. Diversity was between 4 and 30 alleles per locus totalling 126 alleles and we showed that these markers possess appropriate genetic resolution for individual and species identification for the populations under study. This multiplex panel represents the largest number of microsatellites amplified in one reaction proposed for these two hare species and provides a cost-effective and valuable tool for further hybridization studies and the management of hares.
Data from: A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)
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On following pages: 51. Tehuantepec Jackrabbit (Lepus flavigularis); 52. Iberian Hare (Lepus granatensis); 53. European Hare (Lepus europaeus); 54. Broom Hare (Lepus castroviejoi); 55. Corsican Hare (Lepus corsicanus); 56. White-tailed Jackrabbit (Lepus townsendii); 57. Arctic Hare (Lepus arcticus); 58. Alaskan Hare (Lepus othus); 59. Mountain Hare (Lepus timidus); 60. Japanese Hare (Lepus brachyurus); 61. Manchurian Hare (Lepus in Leporidae
On following pages: 51. Tehuantepec Jackrabbit (Lepus flavigularis); 52. Iberian Hare (Lepus granatensis); 53. European Hare (Lepus europaeus); 54. Broom Hare (Lepus castroviejoi); 55. Corsican Hare (Lepus corsicanus); 56. White-tailed Jackrabbit (Lepus townsendii); 57. Arctic Hare (Lepus arcticus); 58. Alaskan Hare (Lepus othus); 59. Mountain Hare (Lepus timidus); 60. Japanese Hare (Lepus brachyurus); 61. Manchurian Hare (Lepus
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