Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2
datasets available to search
ShareScore release 0.9.0
Dataset results
2 results for “Mesopelagic carbon budget”
Supplementary materials for the article: "Where and when the mesopelagic carbon budget balances, if at all", Oliver et al., 2023
<p>This is the supplementary materials for the article: "Where and when the mesopelagic carbon budget balances, if at all", Oliver et al., 2023</p> <p>This folder contains:</p> <p>MLD.mat<br> - The annual maximum of monthly-averaged mixed layer depth (m) in ECCO:<br> 1992-2001 mean (data retrieved from ECCO Consortium et al., 2023). The mixed layer<br> depth is determined by the depth where waters are first 0.8◦ C colder than the surface, as<br> per the Kara Formula (Kara et al., 2000)</p> <p>FBGC3mm.mat<br> - Sinking detrital flux [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), monthly average</p> <p>FBGC4mm.mat<br> - Detritus removal via remineralisation and denitrification [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), monthly average</p> <p>FBGC7mm.mat<br> - Detritus creation [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), monthly average</p> <p>DETmm.mat<br> - Sinking Detritus [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), monthly average</p> <p>NPP.mat<br> - Primary production [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), annual average</p> <p>export.mat <br> - Export production [mmol P/m3/d], produced by MOPS (Kriest et al., 2015), annual average</p> <p>grid.mat<br> - model grid information for ECCO transport matrix (see Khatiwala, S. (2018): https://zenodo.org/record/1246300<br> 463doi: 10.5281/ZENODO.1246300)</p> <p>cmap5.mat<br> - matlab colormap </p> <p>bluewhitered.mat <br> - matlab colormap </p> <p>cmap12.mat<br> - matlab colormap</p> <p>PlotPaperFigures.m<br> - matlab script for plotting journal paper figures for "Where and when the mesopelagic carbon budget balances, if at all", Oliver et al., 2023</p> <p>findClosest.m<br> - matlab script to find the closest value in a list of values to a specified value</p>
Supplementary materials: "Where and when the mesopelagic carbon budget balances, if at all", Oliver et al.
<div>Data Supplement to "Where and when the mesopelagic carbon budget balances, if at all"</div> <div>Sophy Oliver(1), Andrew Yool(1), Stephanie A. Henson(1), Adrian P. Martin(1)</div> <div>1 National Oceanography Centre, Southampton SO14 3ZH, UK</div> <div>Corresponding author: Sophy Oliver, sophy.oliver@noc.ac.uk</div> <div> </div> <div>This data supplement contains results using the MOPS biogeochemical model (Kriest et al. 2015).</div> <div> </div> <div>-> Model_ep_npp_MLD (MATLAB files required to create Figure S1 and S10)</div> <div>-> NPP.mat: MOPS annually-averaged net primary production [mmol P / m3 / d]</div> <div>-> EP.mat: MOPS annually-averaged export production [mmol P / m3 / d]</div> <div>-> MLDinterp.mat: annual maximum of monthly-averaged mixed layer depth [m] in ECCO: 1992-2001 mean (Fukumori et al. 2023). The mixed layer depth is determined by the depth where waters are first 0.8°C colder than the near-surface, as per the Kara Formula (Kara, Rochford, and Hurlburt 2000).</div> <div>-> DOPAVG.mat: MOPS monthly-averaged dissolved organic phosphate (DOP) [mmol P / m3]</div> <div> </div> <div>-> Model_Budget_Components (MATLAB files required to create Figures 1 and S2-9)</div> <div>-> Flux.mat: Monthly-averaged particulate flux sinking into the top of each depth level [mmol P / m2 / d]. Note that depth level 1 corresponds to flux to the sea floor (burial).</div> <div>-> Drem.mat: Monthly-averaged remineralisation and denitrification of particulate matter [mmol P / m3 / d]</div> <div>-> DOPnew.mat: Monthly-averaged creation of dissolved organic phosphate by dying plankton [mmol P / m3 / d] </div> <div>-> DOPrem.mat: Monthly-averaged remineralisation and denitrification of dissolved organic phosphate [mmol P / m3 / d]</div> <div>-> det_vt.mat: Monthly-averaged change in particulate organic phosphate after vertical transport is applied [mmol P / m3 / d]</div> <div>-> det_ht.mat: Monthly-averaged change in particulate organic phosphate after horizontal transport is applied [mmol P / m3 / d]</div> <div>-> dop_vt.mat: Monthly-averaged change in dissolved organic phosphate after vertical transport is applied [mmol P / m3 / d]</div> <div>-> dop_ht.mat: Monthly-averaged change in dissolved organic phosphate after vertical transport is applied [mmol P / m3 / d]</div> <div> </div> <div>-> Code_Analysis_Plotting</div> <div>-> plot_npp.m: MATLAB script to plot Figure S1 of the supplementary figures of MOPS net primary and export production, and ECCO mixed layer depth.</div> <div>-> meso_monthly_budget.m: MATLAB script to calculate and plot the global seasonal mesopelagic organic carbon budget and its components (Figures 1 and S2-9 and S11).</div> <div>-> plot_doc.m: MATLAB script to plot Figure S10 of the supplementary figures of MOPS annually averaged DOC [µmol C kg-1] at 15m, 310m, and 610m depth.</div> <div>-> bluewhitered.mat: MATLAB colorscale.</div> <div> </div> <div>Model grid information for MITgcm_ECCO can be found here: http://kelvin.earth.ox.ac.uk/spk/Research/TMM/TransportMatrixConfigs/ (Samar Khatiwala, University of Oxford).</div> <div> </div>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.