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10
datasets available to search
ShareScore release 0.9.0
Dataset results
10 results for “MetaMeta”
mOTUs database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>mOTUs database for MetaMeta pipeline version 1. The database was downloaded from http://www.bork.embl.de/software/mOTU/share/mOTUs.Linux64bits.tar.gz and it is based on marker genes from 1,753 bacterial reference genomes + marker genes from 263 metagenomes and 3,496 bacterial genomes dating from February 2012</p>
GOTTCHA database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>GOTTCHA database for MetaMeta pipeline version 1. The database was downloaded from ftp://ftp.lanl.gov/public/genome/gottcha/GOTTCHA_database_v20150825/GOTTCHA_BACTERIA_c4937_k24_u30.species.tar.gz and it is based on the NCBI RefSeq Complete Genome sequences of Archaea and Bacteria dating from 2015-08-25</p>
kaiju database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>kaiju database for MetaMeta pipeline version 1. The database was generated by the makeDB.sh script and it is based on the NCBI RefSeq Complete Genome sequences (protein sequences) of Archaea and Bacteria dating from 2016-11-07</p> <p> </p>
kraken database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>kraken database for MetaMeta pipeline version 1. The database was generated by the kraken-build script and it is based on the NCBI RefSeq Complete Genome sequences of Archaea and Bacteria dating from 2015-06-02</p> <p> </p>
CLARK database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>CLARK database for MetaMeta pipeline version 1. The database was generated by the script set_targets.sh and it is based on the NCBI Complete Genome RefSeq sequences of Archaea and Bacteria dating from 2016-11-07</p>
DUDes database for MetaMeta pipeline - Archaea and Bacteria - version 1
<p>DUDes database for MetaMeta pipeline version 1. The database was generated by the DUDesDB.py script and it is based on the NCBI RefSeq Complete Genome sequences of Archaea and Bacteria dating from 2015-03-26</p>
kaiju database for MetaMeta pipeline - Fungal and Viral - 201709
<p>kaiju database for MetaMeta pipeline. The database was generated by the makeDB.sh script and it is based on the NCBI RefSeq Complete Genome sequences (protein sequences) of Fungi and Virus dating from 2017-09</p>
DUDes database for MetaMeta pipeline - Fungal and Viral - 201709
<p>DUDes database for MetaMeta pipeline. The database was generated by the DUDesDB.py script and it is based on the NCBI RefSeq Complete Genome sequences of Fungi and Virus dating from 2017-09</p>
CLARK database for MetaMeta pipeline - Fungal and Viral - 201709
<p>CLARK database for MetaMeta pipeline. The database was generated by the script set_targets.sh and it is based on the NCBI Complete Genome RefSeq sequences of Fungi and Virus dating from 2017-09</p>
kraken database for MetaMeta pipeline - Fungal and Viral - 201709
<p>kraken database for MetaMeta pipeline. The database was generated by the kraken-build script and it is based on the NCBI RefSeq Complete Genome sequences of Fungi and Virus dating from 2017-09</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.