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4 results for “Motif search”
vAMoS: eVent Abstraction via Motifs Search - Appendix
<p>The repository contains the Appendix for the paper vAMoS: eVent Abstraction via Motifs Search.</p> <p>Appendix 1 contains the models of the patterns to be identified, that is the list of Ps.<br> Appendix 2 contains all the information regarding the experiments conducted, such as algorithms configuration and results. The experiments conducted concern the application of the algorithms both on synthetic and real datasets.<br> Appendix 3 contains the list of process models derived by the algorithms during the evaluation on a real dataset (qualitative).</p> <p>The XES files are the event logs of the P patterns used in the tests.</p>
Do expectation-maximization algorithms have to make use of 'background distribution' for de novo motif search?
<p>Data for the article "Do expectation-maximization algorithms have to make use of ‘background distribution’ for de novo motif search?". The preprint is live on Research Square (DOI: <a href="https://www.researchsquare.com/article/rs-1725972/v2">10.21203/rs.3.rs-1725972/v2</a>).</p>
A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation.
GEO Series GSE17135. Staphylococcus aureus subsp. aureus COL; Staphylococcus aureus subsp. aureus MW2; Staphylococcus aureus subsp. aureus Mu50; Staphylococcus aureus subsp. aureus MSSA476; Staphylococcus aureus subsp. aureus MRSA252; Staphylococcus aureus; Staphylococcus aureus subsp. aureus NCTC 8325; Staphylococcus aureus subsp. aureus N315; Staphylococcus aureus subsp. aureus USA300. 2 samples. Type: Non-coding RNA profiling by array.
SHAPE-guided RNA structure homology search and motif discovery
GEO Series GSE189259. Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus 2. 4 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.