Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

52

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

52 results for “Multi‐scale modelling”

Learn how ShareScore rates datasets ↗
zenodo44/100

Data for: Deriving early hydration cement paste phase assemblage, microstructure development and elastic properties using thermodynamic simulation and multi-scale material modeling

<h2>Description</h2> <p>DATA REPOSITORY FOR</p> <p>Title:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Deriving early hydration cement paste phase assemblage, microstructure development and elastic properties using thermodynamic simulation and <br>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; multi-scale material modeling<br>By:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Eva J&auml;gle, Jithender J. Timothy, Daniel Jansen, Alisa Machner<br>Accepted by:&nbsp; Cement and Concrete Research</p> <p>This dataset presents the data of the paper 'Deriving early hydration cement paste phase assemblage, microstructure development and elastic properties using thermodynamic simulation and multi-scale material modeling' submitted to and accepted by Cement and Concrete Research. The dataset follows the structure of the paper such that the calculations described therein can be reproduced.</p> <p>Data is available on three types of cement: Two ordinary Portland cements of different grinding fineness (CEM I 42.5 R und CEM I 52.5 R) and one limestone-containing blended cement (CEM II/A-LL 42.5 R). The data refer to the first 24 hours of hydration and temperature conditions of 20&deg;C (for CEM I 42.5 R, CEM I 52.5 R, CEM II/A-LL 42.5 R) and 35&deg;C (for CEM I 52.5 R). All data were retrieved for cement pastes with a water-to-cement ratio of 0.45.</p> <p>The dataset contains raw and processed data from quantitative X-ray diffraction, 5PL cement dissolution fitting, thermodynamic simulation with GEMS, multi-scale material modeling, ultrasonic testing and Vicat penetration tests. The data is mainly available in .xlsx files together with short descriptions in ReadMe.txt files.</p>

opencc-by-4.0Dec 2023View details →
zenodo40/100

Multi-scale sea ice kinematics modeling dataset with a tripolar grid hierarchy (TS grids) in CESM

<p>1. We design a new tripolar grid generation method for global ocean-sea ice modeling. The generated grid is orthogonal and compatible with ocean and sea ice models. A hierarchy of ocean-sea ice model grid is constructed and incorporated in CESM by using the grid generation method.&nbsp;The&nbsp;generated&nbsp;tripolar grids are regarded as&nbsp;TS045, TS015 and TS005, with the nominal resolution of 0.45<sup>o </sup>(800x560), 0.15<sup>o</sup>&nbsp;(2400x1680) and 0.05<sup>o </sup>(7200x5040), respectively.&nbsp;The resolution range for the grid hierarchy covers climate modeling to sub-mesoscale capable for ocean modeling.</p> <p>2. Atmosphere&nbsp;forced simulations based on CESM D-type experiments are carried out for TS grid. Both&nbsp;TS045 and TS015 experiments start&nbsp;with no sea ice, integrate for 42 years. TS005 starts from the equilibrium state of TS015 result (36 year), runs for another 7 years.</p> <p>3. TS0*.grid files include necessary grid information, such as grid latitude, longitude, etc. TS0*.kmt files denote the deepest level at each grid location. Bilinear interpolators from TS grid to atmosphere T62 grid are provided with map*.nc files. The model outputs at year 42 are provided with T*.nc files. The last two kinds of netcdf files are compressed with Linux command &quot;gzip&quot;.</p>

opencc-by-4.0May 2020View details →
zenodo40/100

Simulated Neutral Landscape Models and Scaling Results for Testing of Multi-Dimensional Grid-Point Scaling Algorithm

<p>The data package contains (1) simulations of neutral landscape models of categorical data for benchmark testing of scaling algorithms, and (2) scaling results for testing consistency and sensitivity of the&nbsp;newly developed Multi-Dimensional Grid-Point (MDGP) scaling algorithm.</p> <p>Neutral landscapes were generated using the &quot;nlmpy&quot; python module.&nbsp; The MDGP scaling algorithm and the test framework were implemented in R (https://github.com/gannd/landscapeScaling).&nbsp;&nbsp;&nbsp;</p>

opencc-by-4.0Aug 2018View details →
zenodo40/100

Multi-scale modeling - WRF-CIM coupling

<p>In this dataset you can find WRF and CIM simulated data produced and used in the paper (<a href="https://www.sciencedirect.com/science/article/pii/S2212095518301688">Multi-scale modeling of the urban meteorology: Integration of a new canopy model in the WRF model</a>).</p> <p>More details on the datasets can be found in the Python Notebook.</p> <p>Additional data (namelists for ex.) can be obtained directly by contacting the authors.</p>

opencc-by-4.0May 2018View details →
zenodo40/100

Supplementary Dataset: Air quality modeling intercomparison and multi-scale ensemble chain for Latin America

<p>The Supplementary dataset of the manuscript titled "Air quality modeling intercomparison and multi-scale ensemble chain for Latin America" can be downloaded via this link:<br>https://swiftbrowser.dkrz.de/public/dkrz_3ab03fbe-db0a-42e8-8b19-caf61d10634d/PAPILA/</p> <p>The data repository contains the model data used in the model intercomparison with six global and regional chemical-transport model over Latin America and the observation datasets used in the model intercomparison. &nbsp;This work presents the first model intercomparison and ensemble construction for Latin America, which was assembled under the Prediction of Air Pollutants in Latin America (PAPILA project (https://papila-h2020.eu/papila).&nbsp;&nbsp;</p>

opencc-by-4.0Jul 2024View details →
zenodo40/100

Dataset with the node discretisations employed for training advection models in "Multi-scale rotation-equivariant graph neural networks for unsteady Eulerian fluid dynamics"

<p>Dataset with the node discretisations employed for training advection models in &quot;Multi-scale rotation-equivariant graph neural networks for unsteady Eulerian fluid dynamics&quot; (https://doi.org/10.1063/5.0097679).</p> <p>The training code is available at https://github.com/mario-linov/graphs4cfd.</p>

opencc-by-4.0May 2023View details →
zenodo36/100

Experimental data for "Development of Experimental Techniques for Parameterization of Multi-scale Lithium-ion Battery Models"

<p>This dataset is for the validation data in&nbsp;Chen et al. (2020). It contains data for three different LG M50 cells undergoing an experiment in which the cells are charged in a constant-current/constant-voltage fashion and discharge at a constant current for different C-rates (C/10, C/2, 1C and 1.5C). Apart from the current and voltage, the temperatures of the cell surface and the thermal chamber in which they are cycled is recorded too.</p> <p><strong>References:</strong></p> <p>Chang-Hui Chen&nbsp;<em>et al</em>&nbsp;2020&nbsp;<em>J. Electrochem. Soc.</em>&nbsp;<strong>167</strong>&nbsp;080534 (<a href="https://doi.org/10.1149/1945-7111/ab9050">https://doi.org/10.1149/1945-7111/ab9050</a>)</p>

opencc-by-4.0May 2020View details →
dryad36/100

Data from: Disentangling elevational richness: a multi-scale hierarchical Bayesian occupancy model of Colorado ant communities

Understanding the forces that shape the distribution of biodiversity across spatial scales is central in ecology and critical to effective conservation. To assess effects of possible richness drivers, we sampled ant communities on four elevational transects across two mountain ranges in Colorado, USA, with seven or eight sites on each transect and twenty repeatedly sampled pitfall trap pairs at each site each for a total of 90 days. With a multi-scale hierarchical Bayesian community occupancy model, we simultaneously evaluated the effects of temperature, productivity, area, habitat diversity, vegetation structure, and temperature variability on ant richness at two spatial scales, quantifying detection error and genus-level phylogenetic effects. We fit the model with data from one mountain range and tested predictive ability with data from the other mountain range. In total, we detected 105 ant species, and richness peaked at intermediate elevations on each transect. Species-specific thermal preferences drove richness at each elevation with marginal effects of site-scale productivity. Trap-scale richness was primarily influenced by elevation-scale variables along with a negative impact of canopy cover. Soil diversity had a marginal negative effect while daily temperature variation had a marginal positive effect. We detected no impact of area, land cover diversity, trap-scale productivity, or tree density. While phylogenetic relationships among genera had little influence, congeners tended to respond similarly. The hierarchical model, trained on data from the first mountain range, predicted the trends on the second mountain range better than multiple regression, reducing root mean squared error up to 65%. Compared to a more standard approach, this modeling framework better predicts patterns on a novel mountain range and provides a nuanced, detailed evaluation of ant communities at two spatial scales.

opencc-zeroDec 2017View details →
dryad36/100

Random forest modelling of multi-scale, multi-species habitat associations within KAZA transfrontier conservation area using spoor data

<p>As landscape-scale conservation models grow in prominence, assessments of how wildlife utilise multiple-use landscapes are required to inform effective conservation and management planning. Such efforts should strive to incorporate multi-species perspectives to maximise value for conservation, and should account for scale to accurately capture species-environment relationships. We show that the random forest machine learning algorithm can be used to model large-scale sign-based data in a multi-scale framework. We used this method to investigate scale-dependent habitat associations for 16 mammal species of high conservation importance across the southern Kavango Zambezi (KAZA) Transfrontier Conservation Area in Botswana and Zimbabwe. Our findings revealed substantial variation in the factors shaping habitat use across species, and illustrate that different species often have divergent responses to the same environmental and anthropogenic factors, and differ in the scales at which they respond to them. For all variables across all species, scale optimisation most often selected our largest scale. Precipitation, soil nutrients, and vegetation appeared to be the most important factors determining mammal distributions, likely through their associations with food resources for herbivores and, in turn, prey availability for carnivores. Anthropogenic pressures also had an important influence on habitat use, with many species selecting against areas with high cattle density. The variety of relationships with human density indicated that species vary in their tolerance of humans. We found a consistent positive relationship with areas under high protection, and negative relationship with unprotected and less-strictly protected areas. Policy implications: This study highlights the importance of adopting a multi-scale, multi-species approach for critical decision-making processes that depend on understanding wildlife distributions and habitat associations, such as protected area, corridor, and buffer zone prioritisation. We use our findings to identify changing rainfall patterns and increasing livestock numbers as two emerging trends that may impact wildlife distributions, both within sub-Saharan Africa and on a global scale.</p>

opencc-zeroJun 2022View details →
dryad36/100

Data from: Climatically robust multi-scale species distribution models to support pronghorn recovery in California

<p>We combined two climate-based distribution models with three finer-scale suitability models to identify habitat for pronghorn recovery in California now and into the future.</p> <p>Location: California, United States </p> <p>Methods: We used a consensus approach to identify areas of suitable climate now (1980-2010) and future (2031-2060) for pronghorn in California. We compared the results of models from two separate hypotheses about their historical ecology in the state, specifically the migration hypothesis and the niche reduction hypothesis. We combined occurrences from GPS collars distributed across three populations of pronghorn in the state to create three distinct habitat models: (1) an ensemble model using Random Forests, Maxent, Classification and Regression Trees, and a Generalized Linear Model; (2) a step selection function; and (3) an expert-driven model. We evaluated consensus among both the climate models and the suitability models to prioritize areas for, and evaluate the prospects of, pronghorn recovery. </p> <p>Results: Climate suitability for pronghorn in the future depends heavily on model assumptions. Under the migration hypothesis, our model predicted that there will be on suitable climate in California in the future. Under the niche reduction hypothesis, by contrast, suitable climate will expand. Habitat also depended on the methods used, but areas of consensus among all three exist in large patches throughout the state.</p> <p>Main Conclusions: Identifying habitat for a species which has undergone extreme range collapse, and which has very fine scale habitat needs, presents novel challenges for spatial ecologists. Our multi-method, multi-hypothesis approach can allow habitat modelers to identify areas of consensus and, perhaps more importantly, critical knowledge gaps that could resolve disagreements among the models. For pronghorn, a better understanding of their upper thermal tolerances and whether historical populations migrated will be crucial to their potential recovery in California and throughout the arid Southwest.</p>

opencc-zeroJun 2024View details →
zenodo36/100

PiezoTensorNet: Crystallography informed multi-scale hierarchical machine learning model for rapid piezoelectric performance finetuning

<h2>Description:</h2> <p>a. <strong>Feature Engineering</strong>:</p> <p>&nbsp; &nbsp; The file <strong>data_of_145_features.csv</strong> consists of the datasets of the features. The datasets correspond to Fig. 1(a) of the paper.</p> <p>b. <strong>HierCrystalNet&nbsp; of PiezoTensorNet</strong>:</p> <p>&nbsp; &nbsp; &nbsp; The saved models after training HierCrystalNet are placed inside the zip folders, namely, (i)<strong> classification_saved_models.zip</strong>, (ii) PG1_cubic_saved_models.zip, (iii)&nbsp; &nbsp; &nbsp; &nbsp; PG2_tetragonal42m_saved_models.zip, (iv) PG3_orthorhombic222_saved_models.zip, (v) PG4_hex6tetra4mm_saved_models.zip, and (vi) PG5_orthorhombicmm2_saved_models.zip.</p> <p>c. <strong>ModularEnsembleNet of PiezoTensorNet </strong>:</p> <p>&nbsp; &nbsp; &nbsp;The prediction_results.zip folder consists the prediction results of the ModularEnsembleNet.&nbsp;</p> <p>d. <strong>Input data of piezoelectric tensors and stiffness tensors for the</strong>&nbsp;<strong>finite element analysis</strong>:&nbsp;</p> <p>(i) &nbsp; &nbsp; <em><strong>piezoelectric_tensors_AlN_B0.3Er0.5Al0.2N_alloy.zip</strong></em>:&nbsp; The coefficients of piezoelectric tensors (array shape: 3x6) for AlN&nbsp; alloy and B0.3Er0.5Al0.2N alloy are respectively presented in &nbsp;<strong>undoped_AlN_piezoelectric_tensor.csv</strong> and <strong>B0.3Er0.5Al0.2N_alloy_unrotated_piezoelectric_tensor.csv</strong> files. Both of these files contain the data for samples whose laboratory coordinate system is same with that of the orientation of crystal lattice (all of the three Euler angles theta, psi and phi&nbsp; = 0 degree ), and so the compositional effect on the piezoelectric behavior can be assessed solely without considering the orientation effect. &nbsp;Rotation or other transformation can cause the&nbsp; vector value of&nbsp; (theta, phi, phis) other than (0,0,0) which&nbsp; indicates that the laboratory coordinate system of a sample being different than its&nbsp; lattice orientation. The effect of two different magnitudes of rotation on the coefficients of piezoelectric tensors for B0.3Er0.5Al0.2N alloy are revealed through the files <strong>B0.3Er0.5Al0.2N_alloy_rotated_at_orientation_1_piezoelectric_tensor.csv</strong> and&nbsp; <strong>B0.3Er0.5Al0.2N_alloy_rotated_at_orientation_2_piezoelectric_tensor.csv</strong>. Orientation 1 refers to<strong> theta = 0 degree, psi = 268.47 degree, 91.52 degree, 0 &lt;= phi &lt;= 360 degree</strong> whereas&nbsp;<strong> theta = 180 degree, psi = 268.47 degree, 91.52 degree, 0 &lt;= phi &lt;= 360</strong> for orientation 2.&nbsp; The units of the coefficients are C/m^2. The description of the methodology on how to generate this data in this format is provided at https://piezoelectrictensorsdatabase.streamlit.app/ .</p> <p>(ii)&nbsp;<em><strong>stiffness_tensors_AlN_B0.3Er0.5Al0.2N_alloy.csv</strong></em>: The stiffness tensors (array shape: 6x6) for the two materials AlN&nbsp; alloy and B0.3Er0.5Al0.2N alloy at room temperature are presented through the four csv files.&nbsp; The elements of stiffness tensors in the datasets are presented in GPa. The Cijkl tensors are provided first for isotropy and then for orthotropy assumptions. The description of these tensors for AlN and &nbsp;B0.3Er0.5Al0.2N materials are provided in the web apps:&nbsp; https://isotropic-elasticity.streamlit.app/ and &nbsp;https://orthotropic-elasticity.streamlit.app/</p>

opencc-zeroJul 2023View details →
zenodo36/100

Upscaling of elastic properties in carbonates: a modeling approach based on a multi-scale geophysical dataset

<p>Dataset for the article &quot;Upscaling of elastic properties in carbonates: a modeling approach based on a multi-scale geophysical dataset&quot;<br> by Bailly C., Fortin J., Adelinet&nbsp;M., Hamon&nbsp;Y.</p> <p>submitted to Journal of Geophysical Research: Solid Earth.</p> <p>Please refer to the ReadMe file for more details.</p>

opencc-by-4.0Nov 2019View details →
zenodo36/100

Raw datasets for paper "Multi-scale hydraulic graph neural networks for flood modelling"

<p>The repository contains two zip folders for the synthetic and case study datasets (raw_datasets_mesh.zip, raw_datasets_dk15.zip).&nbsp;</p> <p>Each zip folder&nbsp;comprises 4 subfolders (DEM, Geometry, Hydrograph, Simulations), containing the elevation, boundary polygon, discharge hydrograph, and full hydrodynamic results for all simulations.</p> <p>The overview.csv file provides the seeds used for experiment replicability and the runtime of the numerical model on each simulation.</p>

opencc-by-4.0Aug 2024View details →
zenodo36/100

Improving stratocumulus cloud amounts in a 200-m resolution multi-scale modeling framework through tuning of its interior physics Part 2

<p>This dataset includes model outputs averaged from day 2 to day 15 using the multiscale modeling framework (MMF, also referred to as ``superparameterization&#39;&#39;) for</p> <ul> <li>Low-resolution MMF (LR): SP_newsst_long_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_32_x_120z1200m.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc <ul> <li>crm_nx = 32, crm_ny = 1, crm_dx = 1200 m, crm_dt = 5s, crm_nx_rad = 16, crm_ny_rad=1</li> </ul> </li> <li>High-resolution MMF (HR): UP_newsst_long_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_64_x_120z200m.0.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc <ul> <li>crm_nx = 64, crm_ny = 1, crm_dx = 200 m, crm_dt = 0.5s, crm_nx_rad = 16, crm_ny_rad=1</li> </ul> </li> <li>Same as HR, but considers hyperviscosity with tau = 30s (HRh30): UPhyperlag30_newsst_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_64_x_120z100m.0.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc</li> <li>Same as HR, but considers hyperviscosity with tau = 150s (HRh15): UPhyperlag15_newsst_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_64_x_120z100m.0.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc</li> <li>Same as HRh, but considers both hyperviscosity and sedimentation (HRhs15) with tau = 30s and sigmag = 1.5: HPhyper_sedi15_long_newsst_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_64_x_120z200m.0.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc</li> <li>Same as HRh, but considers both hyperviscosity and sedimentation (HRhs12) with tau = 30s and sigmag = 1.2: HPhyper_sedi12_long_newsst_fluxout_L125_ERA5_2008_F-MMF1_frontera_ne16pg2_r05_oQU240_CRM1_64_x_120z200m.0.5s_crm_nx_rad_16_np_768_nlev_125.frontera.cam.h0.2008-10_2To15.nc</li> </ul>

opencc-by-4.0Jan 2023View details →
zenodo36/100

Improving stratocumulus cloud amounts in a 200-m resolution multi-scale modeling framework through tuning of its interior physics Part 1

<p>This dataset includes 6-month simulations using the ne30pg2 grid. Monthly averaged output files from six experiments are included.</p> <ul> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1 <ul> <li>The config options for this control simulation is <pre>CAM_CONFIG_OPTS = -mach summit -phys default -use_MMF -crm samxx -nlev 60 -crm_nz 50 -crm_dt 10 -crm_dx 2000 -crm_nx 64 -crm_ny 1 -crm_nx_rad 4 -crm_ny_rad 1 -rad rrtmgp -rrtmgpxx -MMF_microphysics_scheme sam1mom -chem none -nlev 125 -crm_nz 115 -crm_dt 2 -crm_dx 200 -crm_nx 256 -crm_ny 1 -crm_nx_rad 4 -crm_ny_rad 1 -use_MMF_VT -cppdefs &#39; -DMMF_ESMT -DMMF_USE_ESMT -DMMF_HYPERVISCOSITY -DMMF_SEDIMENTATION &#39; </pre> </li> </ul> </li> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED <ul> <li>The HV.SED control case is the same as the control (E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1), but considered both hyperciscosity and sedimentation processes.</li> </ul> </li> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED.QW_1E-04 <ul> <li>Same as the&nbsp;HV.SED control case (E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED), but changed the autoconversion thresholds for liquid from QW_1E-03 (default) to QW_1E-04.</li> </ul> </li> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED.QW_5E-04 <ul> <li>Same as the&nbsp;HV.SED control case (E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED), but changed the autoconversion thresholds for liquid from QW_1E-03 (default) to QW_5E-04.</li> </ul> </li> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED.QW_5E-04_QI_5E-05 <ul> <li>Same as the&nbsp;HV.SED control case (E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED), but changed the autoconversion thresholds for liquid from QW_1E-03 (default) to QW_1E-04 and ice from QI_1E-04 (default) to QI_5E-05.</li> </ul> </li> <li>E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED.QW_5E-04_QI_8E-05 <ul> <li>Same as the&nbsp;HV.SED control case (E3SM.INCITE2022-LOW-CLD-00.ne30pg2.F2010-MMF1.L125_115.NXY_256x1.HV.SED), but changed the autoconversion thresholds for liquid from QW_1E-03 (default) to QW_1E-04 and ice from QI_1E-04 (default) to QI_8E-05.</li> </ul> </li> </ul>

opencc-by-4.0Jan 2023View details →
zenodo36/100

Simulation outputs required to generate figures for "Modeling Multi-Scale Deformation Cycles in Subduction Zones with a Continuum Visco-Elastic-Brittle Framework"

<p>This file contains all of the model simulation outputs necessary to produce the figures for the paper &quot;Modeling Multi-Scale Deformation Cycles in Subduction Zones with a Continuum Visco-Elastic-Brittle Framework&quot;.</p> <p>Below are the details of which file is required to produce which figure:</p> <p>&nbsp;</p> <p><strong>Figure 5 (De_dam_fields.pdf) </strong></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/De_dam_We_0_001_dt_10_5_th_10_10_alpha_4_ddam_10.tar.gz">De_dam_We_0_001_dt_10_5_th_10_10_alpha_4_ddam_10.tar.gz</a></p> <p>&nbsp;</p> <p><strong>Figure 6 (convergence.pdf)</strong></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_dt_We_0_001_th_10_10_alpha_4_ddam10.tar.gz">comp_dt_We_0_001_th_10_10_alpha_4_ddam10.tar.gz </a></p> <p>Contains 4 files, each one for a different temporal resolution (delta t).</p> <p>&nbsp;</p> <p><strong>Figure C1 (convergence2.pdf, appendix)</strong></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_dt_We_0_1_th_10_9_alpha_4_ddam10.tar.gz">comp_dt_We_0_1_th_10_9_alpha_4_ddam10.tar.gz </a></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_dt_We_10_th_10_8_alpha_4_ddam10.tar.gz">comp_dt_We_10_th_10_8_alpha_4_ddam10.tar.gz </a></p> <p>Each contains 4 files, one for each temporal resolution (delta t).</p> <p>&nbsp;</p> <p><strong>Figure 7 (CPU_time.pdf)</strong></p> <p>No simulation output file: all of the necessary information (CPU times) are included in the associated MATLAB code, available in the Github repository.</p> <p>&nbsp;</p> <p><strong>Figure 8 (T_h.pdf)</strong></p> <p><strong>Left panels, a, c, e</strong></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_th_We_0_001_dt_10_5_alpha_4_ddam_10.tar.gz">comp_th_We_0_001_dt_10_5_alpha_4_ddam_10.tar.gz </a></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_th_We_0_1_dt_10_4_alpha_4_ddam_10.tar.gz">comp_th_We_0_1_dt_10_4_alpha_4_ddam_10.tar.gz </a></p> <p><a href="https://zenodo.org/api/files/3150cf22-7ee4-4f5a-9cd4-b420ee0dbd91/comp_th_We_10_dt_10_3_alpha_4_ddam_10.tar.gz">comp_th_We_10_dt_10_3_alpha_4_ddam_10.tar.gz </a></p> <p>Each contains 4 files, one for each healing time (T_h)</p> <p><strong>Right panels, b, d, f</strong></p> <p>comp_th_We_0_001_dt_10_5_th_10_11_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_001_dt_10_5_th_10_10_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_001_dt_10_5_th_10_9_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_001_dt_10_5_th_10_8_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_1_dt_10_4_th_10_11_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_1_dt_10_4_th_10_10_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_1_dt_10_4_th_10_9_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_0_1_dt_10_4_th_10_8_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_10_dt_10_3_th_10_11_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_10_dt_10_3_th_10_10_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_10_dt_10_3_th_10_9_alpha_4_ddam_10.tar.gz</p> <p>comp_th_We_10_dt_10_3_th_10_8_alpha_4_ddam_10.tar.gz</p> <p>Each contains 5 files, for 5 different realisations of the model simulations (same parameters, different initial noise on cohesion)</p> <p>&nbsp;</p> <p><strong>Figure 9 (comp_ddam_We_0_001.pdf)</strong></p> <p>comp_ddam_We_0_001_dt_10_5_th_10_10.tar.gz</p> <p>One file for each alpha value (2, 3, 4, 6, 8), one file for each delta d value (0.1, 0.3, 0.5, 0.7, 0.9)</p> <p>&nbsp;</p> <p><strong>Figure 10 (comp_ddam_We_0_1.pdf)</strong></p> <p>comp_ddam_We_0_1_dt_10_4_th_10_9.tar.gz</p> <p>One file for each alpha value (2, 3, 4, 6, 8), one file for each delta d value (0.1, 0.3, 0.5, 0.7, 0.9)</p> <p>&nbsp;</p> <p><strong>Figure 11 (discussion.pdf)</strong></p> <p>u_sfc_We_0_1_dt_10_4_th_10_9_alpha_4_ddam_10.tar.gz</p> <p>u_sfc_We_0_1_dt_10_4_th_10_9_alpha_4_ddam_50.tar.gz</p> <p>&nbsp;</p> <p><strong>SI movie</strong></p> <p>SI_movie.tar.gz</p>

opencc-by-4.0Mar 2023View details →
dryad36/100

Data from: Climatically robust multi-scale species distribution models to support pronghorn recovery in California

Open the record for dataset details and reuse information.

publicJun 2024View details →
dryad36/100

Random forest modelling of multi-scale, multi-species habitat associations within KAZA transfrontier conservation area using spoor data

Open the record for dataset details and reuse information.

publicJun 2022View details →
dryad36/100

Data from: Disentangling elevational richness: a multi-scale hierarchical Bayesian occupancy model of Colorado ant communities

Open the record for dataset details and reuse information.

publicNov 2018View details →
dryad36/100

Large-scale multi-trophic co-response models and environmental control of pelagic food webs in Québec lakes

Open the record for dataset details and reuse information.

publicMar 2021View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record