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32
datasets available to search
ShareScore release 0.9.0
Dataset results
32 results for “Mycobacterium marinum”
Time-lapse 3D confocal microscopy videos of mitochondrial dynamics in human alveolar epithelial cells (A549-DsRed) infected with Mycobacterium marinum (Mmar) strains
<div>The dataset consists of time-lapse, 3D confocal images of mitochondrial dynamics in human alveolar epithelial cells (A549-DsRed) infected with Mycobacterium marinum (Mmar) strains. Images were captured at 60X magnification in an environmental chamber at 35°C for live-cell imaging. Host cell mitochondria were labeled with red fluorescent protein (RFP) and infected with both wildtype (wt) and ESAT-6 operon knockout mutant labeled with green fluorescent protein (GFP) at MOI of 100 for 24 hours at 35°C. Infected cells were identified and analyzed to explore the effect of pathogenic mycobacteria on mitochondrial morphology over time.</div> <div> </div> <div>More details available in this preprint: <a href="https://doi.org/10.48550/arXiv.2411.06035">https://doi.org/10.48550/arXiv.2411.06035</a></div>
Confocal imaging raw data files of autophagy analysis in optn and p62 zebrafish mutants during Mycobacterium marinum infection
<p>Association of fluorescent Mycobacterium marinum bacteria with Ubiquitin immunolabelling and GFP-Lc3 signal in zebrafish larvae carrying mutations in the selective autophagy receptors optnineurin and p62. Data deposited are Leica LIF files belonging bioRxiv 415463; doi: https://doi.org/10.1101/415463</p>
DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages
<p>Confocal RAW imaging data related to manuscript DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages.</p>
Comparative transcriptomics of Mycobacterium bovis and Mycobacterium marinum
GEO Series GSE51881. Mycobacterium marinum; Mycobacterium tuberculosis variant bovis. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Accelerating early anti-TB drug discovery by creating mycobacterial indicator strains that predict mode of action [Mycobacterium marinum]
GEO Series GSE107882. Mycobacterium marinum. 36 samples. Type: Expression profiling by high throughput sequencing.
Imatinib mesylate on Mycobacterium marinum induced tail granulomas in mice
GEO Series GSE215176. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing.
A microarray to characterize the immune response of adult zebrafish to a low dose Mycobacterium marinum infection
GEO Series GSE120552. Danio rerio. 5 samples. Type: Expression profiling by array.
Characterization of the immune response to Mycobacterium marinum infection in zebrafish [mutant 463]
GEO Series GSE118350. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
RNA seq analysis from the kidney of pycard mutant adult zebrafish in Mycobacterium marinum infection
GEO Series GSE189627. Danio rerio. 24 samples. Type: Expression profiling by high throughput sequencing.
Mycobacterium marinum chronic infection of adult zebrafish
GEO Series GSE14782. Danio rerio. 8 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
RNA seq analysis from the kidney neutrophils of pycard mutant adult zebrafish in Mycobacterium marinum infection
GEO Series GSE270136. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA seq analysis from the kidney neutrophils of pycard mutant adult zebrafish in Mycobacterium marinum infection
GEO Series GSE287594. Danio rerio. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis reveals inflammasome-dependent mechanism for early neutrophil response to Mycobacterium Marinum
GEO Series GSE92740. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
Characterization of the immune response to Mycobacterium marinum infection in zebrafish
GEO Series GSE118288. Danio rerio. 8 samples. Type: Expression profiling by high throughput sequencing.
The role of ESX-1 on infected and uninfected neutrophils in Mycobacterium marinum infection
GEO Series GSE172072. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Zebrafish response to Mycobacterium marinum infection (Affymetrix series)
GEO Series GSE8327. Danio rerio. 9 samples. Type: Expression profiling by array.
WhiB6 regulation of ESX-1 gene expression is controlled by a negative feedback loop in Mycobacterium marinum
GEO Series GSE99632. Mycobacterium marinum. 10 samples. Type: Expression profiling by high throughput sequencing.
Temporal genome-wide fitness analysis of Mycobacterium marinum during infection reveals genetic requirement for virulence and survival in amoebae and microglial cells
GEO Series GSE249096. Mycobacterium marinum. 40 samples. Type: Other.
Mutations of the selected strain growing in low levels of Vitamin B12 in Mycobacterium marinum
GEO Series GSE240448. Mycobacterium marinum M. 6 samples. Type: Expression profiling by high throughput sequencing.
Zebrafish response to Mycobacterium marinum infection (Compugen series)
GEO Series GSE8846. Danio rerio. 4 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.