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4 results for “Myxotrichum”
FIGURE 1 in Myxotrichum persicum sp. nov., and two new combinations in the genus Myxotrichum
FIGURE 1. Maximum likelihood phylogenetic tree inferred from the combined ITS, LSU, MCM7 and RPB1 sequence alignment of 55 strains of the Myxotrichaceae and Amorphothecaceae. Maximum likelihood bootstrap supports (≥70%) and Bayesian posterior probabilities support (≥0.9) are given above or below the branches, respectively. Dashes replace non-significant values. The branches with full statistical support (ML = 100%; PP = 1.0) are thickened. The scale bar shows the expected number of changes per site. The tree is rooted to Hyphodiscus hyaloscyphoides (NBRC 104869) and Venturiocistella japonica (NBRC 106633).
FIGURE 2. Myxotrichum persicum. a in Myxotrichum persicum sp. nov., and two new combinations in the genus Myxotrichum
FIGURE 2. Myxotrichum persicum. a. Colonies morphology (surface and reverse) from left to right on PDA, PCA and CMA at 25 °C, after 4 weeks of incubation. b. Ascoma. c. Peridial hyphae. d, e. Appendages. f. Immature asci (arrow) and peridial hyphae. g. Ascospores. Scale bars: b, f=20 μm, c–e, g=10 μm.
TABLE 1 in Myxotrichum persicum sp. nov., and two new combinations in the genus Myxotrichum
<p><b>TABLE 1</b>. Isolates used in the phylogenetic analysis.</p><table><tbody><tr><th><b>Taxon</b></th><th><b>Strain</b></th><th><b>Origin</b></th><th><b>GenBank accession number</b></th><th><b>References</b></th></tr></tbody><tbody><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>MCM7</i></td><td><i>RPB1</i></td><td></td></tr><tr><th><i>Amorphotheca</i> <i>resinae</i></th><td>ATCC 22711= DAOM 170427</td><td>Jet fuel, Canada</td><td>EU030278</td><td>EU030280</td><td>–</td><td>–</td><td>Seifert <i>et al</i>. (2007)</td></tr><tr><th><i>Amorphotheca</i> <i>resinae</i></th><td>ATCC 11841= CBS Creosote-treated 184.54 wooden pole, USA</td><td>AY251067</td><td>EU040231</td><td>–</td><td>–</td><td>Crous <i>et al</i>. (2007), Braun <i>et</i> <i>al</i>. (2003)</td></tr><tr><th></th><td></td><td></td><td><b>ITS LSU <i>MCM7 RPB1</i></b></td><td></td></tr><tr><th><i>Amorphotheca resinae</i></th><td>NBRC 31773= ATCC 11274= CBS 187.54</td><td>Cosmetic face cream, ‘Nivea’, The Netherlands</td><td>LC646545</td><td>LC646546</td><td>LC646547</td><td>LC646548</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Amorphotheca resinae</i> (IT)</b></th><td>ATCC 200942= CBS 406.68</td><td>Soil, Australia</td><td>AF393726</td><td>AY352592</td><td>–</td><td>–</td><td>Park <i>et al</i>. (unpublished), Managbanag <i>et al</i>. (unpublished)</td></tr><tr><th><b><i>Byssoascus striatosporus</i> (T)</b></th><td>CBS:642.66= UAMH 3572</td><td>Soil, Canada</td><td>AF062817</td><td>AB040688</td><td>LC639221</td><td>LC639257</td><td>Hambleton <i>et al</i>. (1998), Sugiyama & Mikawa (2001), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Hyphodiscus hyaloscyphoides</i> (T)</b></th><td>NBRC 104869</td><td>Decaying wood of <i>Betula</i> sp., Japan</td><td>LC639297</td><td>LC639333</td><td>LC639237</td><td>LC431668</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Myxotrichum albicans</i> (T)</b></th><td>CGMCC 16488</td><td><i>Pinus koraiensis</i> leaf litter, China</td><td>MH378419</td><td>MH971222</td><td>–</td><td>–</td><td>Liang <i>et al</i>. (2019)</td></tr><tr><th><b><i>Myxotrichum arcticum</i> (T)</b></th><td>UAMH 7565</td><td>Forest soil, USA</td><td>AF062810</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><b><i>Myxotrichum cancellatum</i> (T)</b></th><td>ATCC 15316= CBS:426.62= UAMH 1911</td><td>Frozen blueberry pastry, USA</td><td>MH858197</td><td>LC639315</td><td>LC639219</td><td>LC639255</td><td>Vu <i>et al</i>. (2019), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Myxotrichum carminoparum</i> (T)</b></th><td>CBS 224.31= UAMH 1597</td><td>Wood pulp, Norway</td><td>AF062812</td><td>LC639307</td><td>LC639211</td><td>LC639247</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Myxotrichum chartarum</i></th><td>NBRC 31717= UAMH 1997</td><td>Soil, Japan</td><td>AF062813</td><td>LC639331</td><td>LC639235</td><td>LC639271</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Myxotrichum circinatum</i> (T)</b></th><td>ATCC 34526= IFM 41295=CBS 129.77= UAMH 1890</td><td>Soil, USA</td><td>MN627784</td><td>MN627782</td><td>LC639234</td><td>LC639270</td><td>RangelGrimaldo <i>et al</i>. (2020)</td></tr><tr><th><i>Myxotrichum deflexum</i></th><td>CBS:544.72</td><td>Soil, Kuwait</td><td>MH860562</td><td>MH872267</td><td>–</td><td>–</td><td>Vu <i>et al</i>. (2019)</td></tr><tr><th><b><i>Myxotrichum deflexum</i> (NT)</b></th><td>CBS 228.61</td><td>Soil, Canada</td><td>AF062814</td><td>LC639308</td><td>LC639212</td><td>LC639248</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Myxotrichum flavoroseum</i> (T)</b></th><td>ATCC 34529= IFM 41293= CBS 130.77= UAMH 1051</td><td>Soil, USA</td><td>NR_158362</td><td>AB359419</td><td>LC639233</td><td>LC639269</td><td>RangelGrimaldo <i>et al</i>. (2020)</td></tr><tr><th><i>Myxotrichum persicum</i></th><td>IRAN 3775C</td><td>Seed endophyte of <i>Aegilops triuncialis</i>, Iran</td><td>OR053729</td><td>OR053730</td><td>–</td><td>–</td><td>This study</td></tr><tr><th><i>Myxotrichum setosum</i></th><td>UAMH 3835</td><td>Soil, Canada</td><td>AF062815</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><b><i>Myxotrichum stipitatum</i> (NT)</b></th><td>NBRC 31721= UAMH 1510</td><td>Sand dune, England</td><td>AF062816</td><td>LC639332</td><td>LC639236</td><td>LC639272</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron boninense</i> (T)</b></th><td>NBRC 115413= DH 1175</td><td>Root of <i>Vaccinium boninense</i>, Japan</td><td>LC639290</td><td>LC639326</td><td>LC639230</td><td>LC639266</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron cereale</i></th><td>UAMH 1522</td><td>Peat soil, Canada</td><td>AF062788</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th></th><td></td><td></td><td><b>ITS LSU <i>MCM7 RPB1</i></b></td><td></td></tr><tr><th><i>Oidiodendron cereale</i></th><td>CCF 3193</td><td>Digestive tract of <i>Acarus siro</i> from seeds of <i>Papaver somniferum</i>, Czech Republic</td><td>LC639291</td><td>LC639327</td><td>LC639231</td><td>LC639267</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron chlamydosporicum</i> (T)</b></th><td>ATCC 18448= CBS 403.69= UAMH 6520</td><td>Soil, Canada</td><td>AF062789</td><td>NG_ 064071</td><td>LC639218</td><td>LC639254</td><td>Hambleton <i>et al</i>. (1998), Vu <i>et al</i>. (2019)</td></tr><tr><th><i>Oidiodendron citrinum</i></th><td>CBS:129229</td><td>USA</td><td>MH865252</td><td>MH876692</td><td>–</td><td>–</td><td>Vu <i>et al</i>. (2019)</td></tr><tr><th><b><i>Oidiodendron citrinum</i> (T)</b></th><td>UAMH 1525</td><td>Soil, Canada</td><td>AF062790</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><b><i>Oidiodendron clavatum</i> (T)</b></th><td>21-64-D</td><td><i>Cicindela transbaicalica</i>, Korea</td><td>LC683775</td><td>LC683776</td><td>–</td><td>–</td><td>Lee <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron echinulatum</i></th><td>UAMH 8467</td><td>Soil, Canada</td><td>AF062791</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><i>Oidiodendron echinulatum</i></th><td>ATCC 16287= CBS:113.65</td><td>Soil, Germany</td><td>LC639276</td><td>LC639304</td><td>LC639208</td><td>LC639244</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron eucalypti</i></th><td>DH 0313= NBRC 115396</td><td>Root of <i>Rhododendron tomentosum</i>, Japan</td><td>LC639283</td><td>LC639319</td><td>LC639223</td><td>LC639259</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron eucalypti</i> (T)</b></th><td>CBS 144423= CPC 32659</td><td><i>Eucalyptus maidenii</i>, Australia</td><td>NR_160624</td><td>NG_ 064544</td><td>–</td><td>–</td><td>Crous <i>et al</i>. (2018)</td></tr><tr><th><i>Oidiodendron flavum</i></th><td>CBS 524.69= UAMH 1524</td><td>Soil, Canada</td><td>AF062792</td><td>LC639316</td><td>LC639220</td><td>LC639256</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron fuscum</i> (T)</b></th><td>CBS 238.31= UAMH 8511</td><td>Wood pulp, Norway</td><td>AF062807</td><td>LC639309</td><td>LC639213</td><td>LC639249</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron griseum</i></th><td>CBS 249.33= UAMH 1403</td><td>Wood pulp, Sweden</td><td>AF062793</td><td>LC639310</td><td>LC639214</td><td>LC639250</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron maius</i> (T)</b></th><td>UAMH 1540</td><td>Soil, Canada</td><td>AF062798</td><td>LC639313</td><td>LC639217</td><td>LC639253</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron mellicola</i></th><td>DH 1211= NBRC 115401</td><td>Honey from persimmon, Japan</td><td>LC639300</td><td>LC639336</td><td>LC639240</td><td>LC639274</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron mellicola</i> (T)</b></th><td>CBS:143839= FMR 15683</td><td>Decanted and filtered blossom honey, Spain</td><td>LT906544</td><td>–</td><td>–</td><td>–</td><td>RodríguezAndrade <i>et al</i>. (2019)</td></tr><tr><th><b><i>Oidiodendron muniellense</i> (T)</b></th><td>CBS 113932= IMI 391998</td><td>Rotten basidiocarp, Spain</td><td>AJ634700</td><td>LC639302</td><td>LC639206</td><td>LC639242</td><td>Calduch <i>et al</i>. (2004), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron myxotrichoides</i> (T)</b></th><td>IMI 388795</td><td>Litter, Spain</td><td>AJ635314</td><td>–</td><td>–</td><td>–</td><td>Calduch <i>et al</i>. (2002)</td></tr><tr><th><b><i>Oidiodendron nigrum</i> (IT)</b></th><td>CBS:321.31</td><td>Wood pulp, Norway</td><td>MH855228</td><td>MH866680</td><td>–</td><td>–</td><td>Vu <i>et al</i>. (2019)</td></tr><tr><th><i>Oidiodendron periconioides</i></th><td>CBS:126939</td><td>Unknown, USA</td><td>MH864342</td><td>MH875787</td><td>–</td><td>–</td><td>Vu <i>et al</i>. (2019)</td></tr><tr><th><b><i>Oidiodendron periconioides</i> (T)</b></th><td>ATCC 18449=CBS 391.69</td><td>Soil, Canada</td><td>AF062802</td><td>LC639311</td><td>LC639215</td><td>LC639251</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th></th><td></td><td></td><td><b>ITS LSU <i>MCM7 RPB1</i></b></td><td></td></tr><tr><th><i>Oidiodendron pilicola</i></th><td>DH 0252= NBRC 115402</td><td><i>Pinus pumila</i> leaf litter, Japan</td><td>LC639282</td><td>LC639318</td><td>LC639222</td><td>LC639258</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron pilicola</i></th><td>CBS 141.72= UAMH 7526</td><td>Soil, Sweden</td><td>AF062787</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><b><i>Oidiodendron ramosum</i> (T)</b></th><td>CBS 113931= IMI 391997</td><td>Rotten basidiocarp, Spain</td><td>AJ634701</td><td>LC639301</td><td>LC639205</td><td>LC639241</td><td>Calduch <i>et al</i>. (2004), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron reticulatum</i> (T)</b></th><td>CBS 113933= IMI 391999</td><td>Soil, Spain</td><td>AJ634699</td><td>LC639303</td><td>LC639207</td><td>LC639243</td><td>Calduch <i>et al</i>. (2004), Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron rhodogenum</i></th><td>CBS 237.31= UAMH 1405</td><td>Sludge in pulp strainers, Norway</td><td>AF062803</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><i>Oidiodendron rhodogenum</i></th><td>CBS 401.69</td><td>Forest soil, Canada</td><td>LC639280</td><td>LC639312</td><td>LC639216</td><td>LC639252</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron scytaloides</i> (T)</b></th><td>UAMH 6521</td><td>Forest soil, Sweden</td><td>AF062804</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><b><i>Oidiodendron setiferum</i> (T)</b></th><td>CBS 114896= UAMH 5715</td><td>House dust, Japan</td><td>AF062805</td><td>LC639305</td><td>LC639209</td><td>LC639245</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><i>Oidiodendron tenuissimum</i></th><td>UAMH 8513= CBS 315.95</td><td>Leaf litter, Spain</td><td>AF062806</td><td>–</td><td>–</td><td>–</td><td>Hambleton <i>et al</i>. (1998)</td></tr><tr><th><i>Oidiodendron tenuissimum</i></th><td>NBRC 115410= DH 0894</td><td>Roots of <i>Rhododendron</i> sp., Japan</td><td>LC639287</td><td>LC639323</td><td>LC639227</td><td>LC639263</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron tokumasui</i> (T)</b></th><td>DH 1137= NBRC:115411</td><td>Root of <i>Vaccinium boninense</i>, Japan</td><td>LC639289</td><td>LC639325</td><td>LC639229</td><td>LC639265</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Oidiodendron truncatum</i> (T)</b></th><td>CBS 222.65= UAMH 1399</td><td>Soil, Canada</td><td>AF062809</td><td>LC639306</td><td>LC639210</td><td>LC639246</td><td>Hambleton <i>et al</i>. (1998), Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Skoua asexualis</i> (T)</b></th><td>CBS 144072= FMR 16572</td><td>Decanted, filtered honey, Spain</td><td>LT964668</td><td>LT964669</td><td>–</td><td>–</td><td>Rodríguez-Andrade <i>et al</i>. (2019)</td></tr><tr><th><i>Skoua fertilis</i></th><td>FMR 16571</td><td>Honey, Spain</td><td>LR585992</td><td>LT965027</td><td>–</td><td>–</td><td>Rodríguez-Andrade <i>et al</i>. (2019)</td></tr><tr><th><i>Skoua fertilis</i></th><td>NBRC 115406= DH 1205</td><td>Honey from apple, Japan</td><td>LC639299</td><td>LC639335</td><td>LC639239</td><td>LC639273</td><td>Hirose <i>et al</i>. (2022)</td></tr><tr><th><b><i>Skoua fertilis</i> (NT)</b></th><td>5159(C)</td><td>Overwintering bee bread of <i>Apis mellifera</i>, Denmark</td><td>-</td><td>KR139934</td><td>–</td><td>–</td><td>Wynns (2015)</td></tr><tr><th><i>Venturiocistella japonica</i></th><td>NBRC 106633</td><td>Apothecium produced on leaf of <i>Cercidiphyllum japonica</i>, Japan</td><td>LC639298</td><td>LC639334</td><td>LC639238</td><td>LC431669</td><td>Hirose <i>et al</i>. (2022)</td></tr></tbody></table><p>...continued on the next page</p><p>...continued on the next page</p><p>...continued on the next page</p><p>Sequences with underlined numbers are generated in this study, others are from GenBank. (T), ex-type; (IT), ex-isotype; (NT), exneotype strains. CBS, Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands; IRAN, Iranian Fungal Culture Collection, Iranian Research Institute of Plant Protection, Tehran, Iran; ATCC, American Type Culture Collection, Manassas, VA, USA; CGMCC, China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China; DAOM, Plant Research Institute, Department of Agriculture (Mycology), Ottawa, Canada; DH, Dai Hirose, Nihon University, Japan; FMR, Facultad de Medicina, Reus, Tarragona, Spain; IFM, Medical Mycology Research Center, Chiba University, Chiba, Japan through the National Bioresource Project, Japan; UAMH, University of Alberta Microfungus Collection and Herbarium, Devonian Botanic Garden, Edmonton, Alberta, Canada.</p>
TABLE 2. The closest hits using a in Myxotrichum persicum sp. nov., and two new combinations in the genus Myxotrichum
<p><b>TABLE 2</b>. The closest hits using a MegaBLAST search of the LSU, ITS, <i>MCM7</i> and <i>RPB1</i> sequences of Malbranchea <i>circinata</i> and <i>M. flavorosea</i>.</p><table><tbody><tr><th><b>Species</b></th><th><b>Sequence</b></th><th><b>Blast hits</b></th><th><b>Query</b></th><th><b>Identity</b></th><th><b>Gaps</b></th></tr></tbody><tbody><tr><th><i>Malbranchea circinata</i></th><td>LSU</td><td><i>Myxotrichum setosum</i> (CBS:260.52, GenBank MH868555)</td><td>66%</td><td>98% (854/871)</td><td>0% (0/871)</td></tr><tr><td>ITS</td><td><i>Myxotrichum chartarum</i> (NBRC 31717, GenBank LC639295)</td><td>99%</td><td>94% (874/925)</td><td>0% (8/925)</td></tr><tr><td><i>MCM7</i></td><td><i>Myxotrichum chartarum</i> (NBRC 31717, GenBank LC639235)</td><td>99%</td><td>91% (542/598)</td><td>0% (1/598)</td></tr><tr><td><i>RPB1</i></td><td><i>Myxotrichum chartarum</i> (NBRC 31717, GenBank LC639271)</td><td>99%</td><td>88% (597/676</td><td>0% (0/676)</td></tr><tr><th><i>Malbranchea flavorosea</i></th><td>LSU</td><td><i>Myxotrichum setosum</i> (CBS:260.52, GenBank MH868555)</td><td>100%</td><td>99 % (611/615)</td><td>0% (1/615)</td></tr><tr><td>ITS</td><td><i>Myxotrichum stipitatum</i> (CBS:393.62, GenBank MH858191)</td><td>88%</td><td>98 % (506/518)</td><td>0% (2/518)</td></tr><tr><td><i>MCM7</i></td><td><i>Myxotrichum stipitatum</i> (NBRC 31721, GenBank LC639236)</td><td>100%</td><td>98 % (587/597)</td><td>0% (0/597)</td></tr><tr><td><i>RPB1</i></td><td><i>Myxotrichum stipitatum</i> (NBRC 31721, GenBank LC639272)</td><td>99%</td><td>98 % (691/703)</td><td>0% (0/703)</td></tr></tbody></table>
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