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8 results for “Nemouroidea”
Supplementary material 1 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
: Data type: phylogenetic data
Supplementary material 2 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
: Data type: molecular data
Figure 6 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 6 Phylogenetic tree of the eleven sequenced stoneflies. Bayesian inference and Maximum Likelihood analysis inferred from PCGs, PCGR, PCG12, and PCG12R supported the same topological structure. Values at nodes are Bayesian posterior probabilities (up) and ML bootstrap values (down) using the PCGs, PCGR, PCG12, and PCG12R datasets. The tree was rooted with two outgroups (P.princeps and S.spinicercia).
Figure 4 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 4 Predicted secondary structure of the srRNA in M.tritaenia. Key: red circle, nucleotide conserved in three nemourid mitogenomes; green circle, nucleotide not conserved. Roman numerals represent the conserved domain structures. Dashes (−) indicate Watson–Crick base pairing, and dots (·) indicate G–U base pairing I–VI indicate six domains in the secondary structure of srRNA.
Figure 3 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 3 Predicted secondary structure of the lrRNA in M.tritaenia. Key: red circle, nucleotide conserved in three nemourid mitogenomes; green circle, nucleotide not conserved. Roman numerals represent the conserved domain structures. Dashes (−) indicate Watson-Crick base pairing, and dots (·) indicate G–U base pairing I–VI indicate six domains in the secondary structure of lrRNA.
Figure 5 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 5 A+T-rich region of two nemourid mitogenomes A structure elements found in the A+T-rich region of two nemourid mitogenomes. TR is the abbreviation of tandem repeat units B putative stem-loop structures found in the A+T-rich region of M.metafiligera (MM indicate M.metafiligera) C putative stem-loop structures found in the A+T-rich region of M.tritaenia (MT indicate M.tritaenia).
Figure 2 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 2 Secondary structure of tRNA families in nemourid mitogenomes. The nucleotide substitution pattern for each tRNA family is modeled using as reference the structure determined for M.tritaenia. Red arrows correspond to insertions. Inferred Watson-Crick bonds are illustrated by lines, whereas GU bonds are illustrated by dots.
Figure 1 from: Cao J-J, Wang Y, Huang Y-R, Li W-H (2019) Mitochondrial genomes of the stoneflies Mesonemoura metafiligera and Mesonemoura tritaenia (Plecoptera, Nemouridae), with a phylogenetic analysis of Nemouroidea. ZooKeys 835: 43-63. https://doi.org/10.3897/zookeys.835.32470
Figure 1 Map of the mitogenomes of M.metafiligera and M.tritaenia. Genes shown on the inside of the map are transcribed in a clockwise direction, whereas those on the outside of the map are transcribed counterclockwise. Different gene types are shown as filled boxes in different colors. Numbers show the sizes of intergenic spacers (positive values) and overlapping region between genes (negative values).
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