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108 results for “Neurospora crassa”
Adaptation to starvation requires a flexible circadian clockwork in Neurospora crassa (RNAseq)
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Data from: Quantitative genetics of temperature performance curves of Neurospora crassa
Earth's temperature is increasing due to anthropogenic CO<sub>2</sub> emissions; and organisms need either to adapt to higher temperatures, migrate into colder areas, or face extinction. Temperature affects nearly all aspects of an organism's physiology via its influence on metabolic rate and protein structure, therefore genetic adaptation to increased temperature may be much harder to achieve compared to other abiotic stresses. There is still much to be learned about the evolutionary potential for adaptation to higher temperatures, therefore we studied the quantitative genetics of growth rates in different temperatures that make up the thermal performance curve of the fungal model system <i>Neurospora crassa</i>. We studied the amount of genetic variation for thermal performance curves and examined possible genetic constraints by estimating the <b>G</b>-matrix. We observed a substantial amount of genetic variation for growth in different temperatures, and most genetic variation was for performance curve elevation. Contrary to common theoretical assumptions, we did not find strong evidence for genetic trade-offs for growth between hotter and colder temperatures. We also simulated short term evolution of thermal performance curves of <i>N. crassa</i>, and suggest that they can have versatile responses to selection.
Data from: Quantitative genetics of temperature performance curves of Neurospora crassa
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Data from: Beyond animals and plants: dynamic maternal effects in the fungus Neurospora crassa
Maternal effects are widely documented in animals and plants, but not in fungi or other eukaryotes. A principal cause of maternal effects is asymmetrical parental investment in a zygote, creating greater maternal versus paternal influence on offspring phenotypes. Asymmetrical investments are not limited to animals and plants, but are also prevalent in fungi and groups including apicomplexans, dinoflagellates, and red algae. Evidence suggesting maternal effects among fungi is sparse and anecdotal. In an experiment designed to test for maternal effects across sexual reproduction in the model fungus Neurospora crassa, we measured offspring phenotypes from crosses of all possible pairs of 22 individuals. Crosses encompassed reciprocals of 11 mating-type "A" and 11 mating-type "a" wild strains. After controlling for the genetic and geographic distances between strains in any individual cross, we found strong evidence for maternal control of perithecia (sporocarp) production, as well as maternal effects on spore numbers and spore germination. However, both parents exert equal influence on the percentage of spores that are pigmented, and size of pigmented spores. We propose a model linking the stage-specific presence or absence of maternal effects to cellular developmental processes: effects appear to be mediated primarily through the maternal cytoplasm, and, after spore cell walls form, maternal influence on spore development is limited. Maternal effects in fungi, thus far largely ignored, are likely to shape species' evolution and ecologies. Moreover, the association of anisogamy and maternal effects in a fungus suggests maternal effects may also influence the biology of other anisogamous eukaryotes.
Data from: Experimental evolution of bet hedging under manipulated environmental uncertainty in Neurospora crassa
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Data from: Beyond animals and plants: dynamic maternal effects in the fungus Neurospora crassa
Open the record for dataset details and reuse information.
Histone deacetylase-1 is required for epigenomic stability in Neurospora crassa
GEO Series GSE286538. Neurospora crassa. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Multidimensional regulation in transcriptome during sexual development in Neurospora crassa revealed with RNA sequencing
GEO Series GSE41484. Neurospora crassa. 16 samples. Type: Expression profiling by high throughput sequencing.
Histone deacetylation and cytosine methylation are required for the normal compartmentalization of heterochromatin in the genome organization of Neurospora crassa
GEO Series GSE232935. Neurospora crassa. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Induction of lignocellulose-degrading enzymes in Neurospora crassa by cellodextrins
GEO Series GSE36719. Neurospora crassa OR74A. 13 samples. Type: Expression profiling by high throughput sequencing.
Identification of direct target genes of the Neurospora crassa essential plant biomass deconstruction transcription factors CLR-1, CLR-2 and XLR-1 (RNA-Seq)
GEO Series GSE68514. Neurospora crassa. 11 samples. Type: Expression profiling by high throughput sequencing.
The Protein Non-anchored cell wall protein NCW-1 promotes cellulase production through effects on cellobiose uptake in Neurospora crassa
GEO Series GSE73838. Neurospora crassa. 2 samples. Type: Expression profiling by high throughput sequencing.
Identification of direct target genes of the Neurospora crassa essential plant biomass deconstruction transcription factors CLR-1, CLR-2 and XLR-1
GEO Series GSE68517. Neurospora crassa. 33 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Effects of combined heat shock and glucose-deprivation on wild type and os2 mutant cells of Neurospora crassa.
GEO Series GSE89602. Neurospora crassa. 6 samples. Type: Expression profiling by high throughput sequencing.
Histone deacetylation and cytosine methylation are required for the normal compartmentalization of heterochromatin in the genome organization of Neurospora crassa [Hi-C]
GEO Series GSE232934. Neurospora crassa. 12 samples. Type: Other.
Circadian Clock-Controlled Translation of Specific mRNAs in Neurospora crassa Requires Rhythmic eIF2α Activity and P-body Sequestration [RNA-seq]
GEO Series GSE181564. Neurospora crassa. 80 samples. Type: Expression profiling by high throughput sequencing.
A comparative systems analysis of polysaccharide-elicited responses in Neurospora crassa reveals carbon source-specific cellular adaptations
GEO Series GSE42692. Neurospora crassa OR74A. 15 samples. Type: Expression profiling by high throughput sequencing.
Identification and Characterization of the Glucose Dual-transporter System: Pleiotropic Roles in Nutrient Transport, Signaling, and Carbon Catabolite Repression in Neurospora crassa
GEO Series GSE78952. Neurospora crassa OR74A. 32 samples. Type: Expression profiling by high throughput sequencing.
Characterization of Neurospora crassa ghh (NCU06095) mutant strains
GEO Series GSE35017. Neurospora crassa. 18 samples. Type: Expression profiling by array.
The genome organization of Neurospora crassa at high-resolution uncovers principles of fungal chromosome topology
GEO Series GSE173593. Neurospora crassa. 10 samples. Type: Other.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.