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60 results for “Nicotiana tabacum”
Nicotiana tabacum genome assembly and annotation
<p><em>De novo</em> genome assembly and annotation of <em>Nicotiana tabacum</em>.</p> <p>The following files are available:</p> <ul> <li>ntab.fa.gz: reference genome sequence in fasta format</li> <li>ntab.gff3.gz: gene annotation in GFF3 format</li> <li>ntab.gtf.gz: gene annotation in GTF format</li> <li>ntab.tx.fa.gz: transcript sequences in fasta format</li> <li>ntab.cds.fa.gz: coding sequences in fasta format</li> <li>ntab.prot.fa.gz: protein sequences in fasta format</li> <li>ntab.tsv.gz: gene functional annotation in TSV format</li> <li>ntab.rt.fa.gz: retrotransposon sequences in fasta format</li> <li>ntab.rt.gff3.gz: retrotransposon annotation on GFF3 format</li> <li>ntab.rt.tsv.gz: retrotransposon annotation in TSV format</li> <li>ntab.chr_to_id.tsv.gz: mapping of sequence names to ids in TSV format</li> </ul>
Nicotiana tabacum L. (BR0000010152720)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152690)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152782)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000012544912)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152935)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152904)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010884089)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000012074563)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152607)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000012460250)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152669)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152812)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152751)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000009396326)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000010152843)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Nicotiana tabacum L. (BR0000024927901)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Predicting Photosynthetic Capacity in Tobacco (Nicotiana tabacum) Using Shortwave Infrared Spectral Reflectance
<p>These files contains the data used for analysis in the (currently under-review) publication "<strong>Predicting Photosynthetic Capacity in Tobacco (</strong><strong><em>Nicotiana tabacum</em></strong><strong>) Using Shortwave Infrared Spectral Reflectance" </strong> in the Journal of Experimental Botany. </p>
Reproductive transcriptome of Nicotiana tabacum male gametophyte unveils decreasing number of new transcription factors during pollen ontogeny
<p>Plants with highly reduced male gametophytes represent a successful adaptation to sexual reproduction, which plays an important role in the colonization and radiation of terrestrial ecosystems. During pollen maturation, microsporocytes to mature pollen grain cells switch from mitosis to meiosis and ultimately form a haploid male gametophyte, a widely used model to study plant development. We performed RNASeq analysis of <em>Nicotiana tabacum</em> at six developmental stages from microspores to mature pollen grain to characterize in detail key transcription factor (TF) genes involved in pollen ontogeny. Our results provide the most complete transcriptomic data during pollen development in the important model plant <em>Nicotiana tabacum. </em>We have identified DEGs associated with six ontogenetic stages of the male gametophyte, providing insights into the molecular regulation of reproductive development by TFs that have a high potential for agronomic research investigating molecular networks associated with pollen sterility and related issues.</p>
Image Repository for Excessive leaf oil modulates the plant abiotic stress response via reduced stomatal aperture in tobacco (Nicotiana tabacum)
<p>This repository contains raw image data from <em>Nicotiana tabacum</em>, associated with a publication related to wild-type and high lipid producing (HLP) tobacco varieties. Sample preparation methods and associated analysis can be found in the associated publication. For information and details, find more on the project Github: https://github.com/danforthcenter/tobacco-heat-paper.</p> <p><strong>Contact information: </strong></p> <p>Katherine M. Murphy, Donald Danforth Plant Science Center, kmurphy@danforthcenter.org</p>
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