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14 results for “Niviventer confucianus”
Figure 1 in Effects of islanding on the genetics of Niviventer confucianus (Mamalia: Rodentia: Muridae) populations in the Thousand Island Lake region
Figure 1. Distribution of 13 islands and three peninsulas in the study. There are 16 populations in total. We collected samples from 5 to 10 points randomly on each island. Here, we have not shown the collection points in Figure 1 because of the different sizes of islands (i.e. collection points cannot be plotted clearly enough on small islands in Figure 1).
Figure 2 in Effects of islanding on the genetics of Niviventer confucianus (Mamalia: Rodentia: Muridae) populations in the Thousand Island Lake region
Figure 2. Bayesian clustering assignment of individual Niviventer confucianus to three clusters based on nuclear (microsatellite) genetic data. Each vertical column represents one individual, with the length of coloured segments proportional to the assignment strength of that individual to each of the three clusters. Most individuals of populations CS, G, D, DM, LW, L and TS are assigned to Cluster 1 (light grey); most individuals of populations Q, Y, JS and ZD are assigned to Cluster 2 (grey); and most individuals of populations WS, WT, ZD and CF are assigned to Cluster 3 (dark). Combined with the island distribution (Figure 1), a reasonable dispersion history of populations could be postulated: population L and TS might be the dispersion centre of Cluster 1, population Y might be the dispersion centre of Cluster 2, and population WT might be the dispersion centre of Cluster 3. Populations in Clusters 1 and 2 are more closely related based on the value of allele frequency divergence (0.0145).
On following pages: 631. Ryukyu Islands Tree Rat (Diplothrix legata); 632. Lesser Bandicoot Rat (Bandicota bengalensis); 633. Greater Bandicoot Rat (Bandicota indica); 634. Savile's Bandicoot Rat (Bandicota savilei), 635. Mackenzie's White-toothed Rat (Berylmys mackenziel); 636. Manipur White-toothed Rat (Berylmys manipulus); 637. Bowers's White-toothed Rat (Berylmys bowersii); 638. Berdmore's White-toothed Rat (Bery/mys berdmorei); 639. Millard's Rat (Dacnomys millard)); 640. Brahman White-bellied Rat (Niviventer brahma); 641. Smoke-bellied White-bellied Rat (Niviventer eha); 642. Anderson's White-bellied Rat (Niviventer andersoni), 643. Sichuan White-bellied Rat (Niviventer excelsion); 644. South China White-bellied Rat (Niviventer huang); 645. Hainan White-bellied Rat (Niviventer lotipes); 646. Himalayan White-bellied Rat (Niviventer niviventen; 647. Spiny Taiwan White-bellied Rat (Niviventer coninga); 648. Soft-furred Taiwan White-bellied Rat (Niviventer culturatus), 649. Cameron Highlands White-bellied Rat (Niviventer cameron); 650. Indochinese White-bellied Rat (Niviventer fulvescens); 651. Bukit White-bellied Rat (Niviventer bukit); 652. Confucian White-bellied Rat (Niviventer confucianus); 653. Limestone White-bellied Rat (Niviventer hinpoon); 654. Indochinese Mountain White-bellied Rat (Niviventer tenaster); 655. Sundaic Arboreal White-bellied Rat (Niviventer cremoriventer); 656. Montane Sumatran White-bellied Rat (Niviventer fraternus);, 657. Montane Javan White-bellied Rat (Niviventer lepturus); 658. Montane Bornean White-bellied Rat (Niviventer rapit). in Muridae
On following pages: 631. Ryukyu Islands Tree Rat (Diplothrix legata); 632. Lesser Bandicoot Rat (Bandicota bengalensis); 633. Greater Bandicoot Rat (Bandicota indica); 634. Savile's Bandicoot Rat (Bandicota savilei), 635. Mackenzie's White-toothed Rat (Berylmys mackenziel); 636. Manipur White-toothed Rat (Berylmys manipulus); 637. Bowers's White-toothed Rat (Berylmys bowersii); 638. Berdmore's White-toothed Rat (Bery/mys berdmorei); 639. Millard's Rat (Dacnomys millard)); 640. Brahman White-bellied Rat (Niviventer brahma); 641. Smoke-bellied White-bellied Rat (Niviventer eha); 642. Anderson's White-bellied Rat (Niviventer andersoni), 643. Sichuan White-bellied Rat (Niviventer excelsion); 644. South China White-bellied Rat (Niviventer huang); 645. Hainan White-bellied Rat (Niviventer lotipes); 646. Himalayan White-bellied Rat (Niviventer niviventen; 647. Spiny Taiwan White-bellied Rat (Niviventer coninga); 648. Soft-furred Taiwan White-bellied Rat (Niviventer culturatus), 649. Cameron Highlands White-bellied Rat (Niviventer cameron); 650. Indochinese White-bellied Rat (Niviventer fulvescens); 651. Bukit White-bellied Rat (Niviventer bukit); 652. Confucian White-bellied Rat (Niviventer confucianus); 653. Limestone White-bellied Rat (Niviventer hinpoon); 654. Indochinese Mountain White-bellied Rat (Niviventer tenaster); 655. Sundaic Arboreal White-bellied Rat (Niviventer cremoriventer); 656. Montane Sumatran White-bellied Rat (Niviventer fraternus);, 657. Montane Javan White-bellied Rat (Niviventer lepturus); 658. Montane Bornean White-bellied Rat (Niviventer rapit).
Supplementary material 2 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure S1–S7, Tables S2–S6. Partial morphological and molecular results
Figure 6 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 6 Principal component analysis of dorsal view (a), ventral view (b), lateral view (c) of skull, and lateral view of the mandible (d) of the three clades.
Figure 1 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 1 Distribution of phylogenetic clades of N. confucianus species complex obtained from Cytb. The numbers correspond to the locality code in Suppl. material 1, Table S1.
Figure 7 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 7 Thin plate splines of dorsal view (a), ventral view (b), lateral view (c) of skull, and lateral view of the mandible (d) of N. sacer, N. confucianus, and N. lotipes.
Figure 5 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 5 Principal component analysis and discriminant analysis of external and skull morphological indices. Principal component plots of external and skull indices are shown in a and b. Discriminant function plots of external and skull indices are shown in c and d, respectively.
Supplementary material 1 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Tables S1. Sampling and Genbank sequences information
Figure 4 in Effects of islanding on the genetics of Niviventer confucianus (Mamalia: Rodentia: Muridae) populations in the Thousand Island Lake region
Figure 4. Relationship between polymorphic information content (PIC) and island area.
Figure 3 in Effects of islanding on the genetics of Niviventer confucianus (Mamalia: Rodentia: Muridae) populations in the Thousand Island Lake region
Figure 3. Relationship between values of FST and geographic distance, n = 78.
Figure 4 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 4 Karyotype of N. sacer (S3307) and N. confucianus (S1101).
Figure 3 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 3 Comparison of ABGD species tree based on genetic distance and phylogenetic tree.
Figure 2 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure 2 Phylogenetic analyses of Cytb gene from all haplotypes by maximum likelihood.
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