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22 results for “Oedipina”
Aligned DNA sequence matrix for phylogenetic analyses in the article "New species of fossorial salamanders of the genus Oedipina (Plethodontidae) from the northwestern Ecuador"
<p>Aligned DNA sequence matrix for phylogenetic analyses of the article "New species of fossorial salamanders of the genus Oedipina (Plethodontidae) from the northwestern Ecuador". The matrix is in NEXUS format.</p> <p>Gene partitions are arranged as follows (tRNAs are included as part of larger adjacent genes):</p> <p>16S = 4- 789 1761- 1891 ;<br> ND1-codonPos1 = 790-1759\3;<br> ND1-codonPos2 = 791-1760\3;<br> ND1-codonPos3 = 792-1758\3;<br> CytB-codonPos1 = 1893-2274\3;<br> CytB-codonPos2 = 1894-2275\3;<br> CytB-codonPos3 = 1892-2276\3;</p>
FIGURE 4 in Description of a new divergent lineage and three new species of Honduran salamanders of the genus Oedipina (Caudata, Plethodontidae)
FIGURE 4. Map showing the collecting localities of Oedipina quadra, O. kasios, and O. leptopoda. The open circle represents a literature record (see McCranie 2006b).
FIGURE 1 in Description of a new divergent lineage and three new species of Honduran salamanders of the genus Oedipina (Caudata, Plethodontidae)
FIGURE 1. Maximum likelihood phylogram. Upper values represent ML bootstrap supports, while lower numbers represent Bayesian posterior probabilities (times 100). Values lower than 50% were not included. Species described as new are highlighted in gray. Asterisks for species of Oedipina indicate specimens from Honduras.
FIGURE 3 in Description of a new divergent lineage and three new species of Honduran salamanders of the genus Oedipina (Caudata, Plethodontidae)
FIGURE 3. Schematic drawings of dorsal views of the limbs of Oedipina. From left to right, right hand and right foot of holotype of O. leptopoda (MVZ 167772), right foot of holotype of O. quadra (MVZ 257761), right foot of holotype of O. kasios (MVZ 232825). All drawings are at the same scale.
FIGURE 4 in A new species of worm salamander (Caudata: Plethodontidae: Oedipina) in the subgenus Oeditriton from the highlands of northern Nicaragua
FIGURE 4. Habitat of Oedipina nica from: (a-b) Reserva Natural Cerro Datanlí-El Diablo; (c) Reserva Natural Cerro Kilambé (note deforested patch reaching over 1300 m a.s.l. in the Reserve's core zone); and (d) Reserva Natural Macizos de Peñas Blancas.
FIGURE 3 in A new species of worm salamander (Caudata: Plethodontidae: Oedipina) in the subgenus Oeditriton from the highlands of northern Nicaragua
FIGURE 3. Map of Nicaragua and Honduras showing the localities of members of the subgenus Oeditriton: Oedipina nica (circles), O. quadra (squares), and O. kasios (triangles). Open symbols represents each species' type locality. If situated very close to each other, we combined distribution points to yield a single point on our map. Water surfaces are shaded light gray. Areas above 600 m are shaded gray. Areas above 1200 m are shaded dark gray.
FIGURE 2 in A new species of worm salamander (Caudata: Plethodontidae: Oedipina) in the subgenus Oeditriton from the highlands of northern Nicaragua
FIGURE 2. Maximum likelihood phylogram (lnL = -5370.356) of Oedipina, showing placement of O. nica within the Oeditriton subgenus. Maximum likelihood bootstrap support values shown above branches, Bayesian posterior probabilities shown below branches. Support values below 50 not shown. Holotype of O. nica shown in bold.
FIGURE 1 in A new species of worm salamander (Caudata: Plethodontidae: Oedipina) in the subgenus Oeditriton from the highlands of northern Nicaragua
FIGURE 1. (a) Adult male holotype of Oedipina nica (MVZ 263774) from Reserva Natural Cerro Datanlí-El Diablo; (b) adult male paratype of O. nica (UF 156447) from Reserva Natural Cerro Kilambé; (c) adult male paratype (UF 156453) and (d) juvenile paratype (UF 156454) of O. nica from Reserva Natural Macizos de Peñas Blancas.
FIGURE 4 in Description of a new species of worm salamander (Caudata, Plethodontidae, Oedipina) in the subgenus Oedopinola from the central portion of the Cordillera Nombre de Dios, Honduras
FIGURE 4. Bayesian phylogram based on concatenated and partition 16S and cyt b dataset, showing phylogenetic hypothesis for the genus Oedipina and its three subgenera and relationships of O. petiola sp. nov. Maximum likelihood bootstrap values and posterior probabilities less than 60 and 0.6 are not shown.
FIGURE 1 in Description of a new species of worm salamander (Caudata, Plethodontidae, Oedipina) in the subgenus Oedopinola from the central portion of the Cordillera Nombre de Dios, Honduras
FIGURE 1. Map of Honduras showing the known localities for Oedipina petiola sp. nov. (square) and its closest relatives, O. gephyra (circle) and O. tomasi (star).
FIGURE 3 in Description of a new species of worm salamander (Caudata, Plethodontidae, Oedipina) in the subgenus Oedopinola from the central portion of the Cordillera Nombre de Dios, Honduras
FIGURE 3. Comparison of foot morphology between the holotype of Oedipina petiola (USNM 343462; SVL = 42.6 mm) and subadult (USNM 343458; SVL = 35.7 mm) and adult (USNM 530585; SVL = 54.1 mm) O. gephyra; A) dorsal (left) and ventral (right) views of right hind foot of O. petiola, B) dorsal (left) and ventral (right) views of right hind foot of a subadult O. gephyra, C) dorsal (left) and ventral (right) views of right hind foot of an adult O. gephyra.
FIGURE 5. A in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 5. A) Dorsal view of holotype (UCR 20215) and B) ventral photo of the paratype (UCR 20169) of Nototriton matama in life. C) Dorsal view of right hand and D) right foot of holotype. Photo A by E. Boza-Oviedo, B by Alex Monro and E. Boza-Oviedo, C and D by A. García-Rodríguez. The bar in hand and feet are 1 mm length.
FIGURE 1 in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 1. Map of the border region between Costa Rica and Panama, showing expedition routes and type localities for new salamander species.
FIGURE 4. A in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 4. A) Dorsal and B) ventral photos of holotype (UCR 20852) of Bolitoglossa kamuk in life. C) Juvenile paratype (UCR 20854) of B. kamuk in life, showing variation in coloration. D) Dorsal view left hand and E) right foot of preserved holotype. Photos A, B and C by S. Rovito, D and E by Adrián García-Rodríguez. The bar in hand and feet are 1 mm length.
FIGURE 8 in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 8. Phylogeny of mtDNA data for Nototriton constructed using Bayesian analysis. Maximum likelihood bootstrap values from RAxML analysis shown above branches, Bayesian posterior probabilities (multiplied by 100) shown below branches. Support values below 50 not shown.
FIGURE 7 in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 7. Phylogeny of mtDNA data for Bolitoglossa constructed using Bayesian analysis. Maximum likelihood bootstrap values from RAxML analysis shown above branches, Bayesian posterior probabilities (multiplied by 100) shown below branches. Support values below 50 not shown.
FIGURE 3. A in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 3. A) Dorsal and B) ventral views of holotype (UCR19893) of Bolitoglossa aureogularis in life. C) Paratype (UCR19857) of B. aureogularis in life. D) Dorsal view of right hand and E) right foot of holotype. Photos A, B and C by E. Boza-Oviedo and Roney Samaniego, D and E by Adrián García-Rodríguez. The bar in hand and feet are 1 mm length.
FIGURE 2. A in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 2. A) Dorsal and B) ventral views of the holotype (UCR 19835) of Bolitoglossa splendida in life. C) Dorsal view of left hand and D) left foot of holotype of B. splendida. Photos A and B by Alex Monro and E. Boza-Oviedo, C and D by A. García-Rodríguez. The bar in hand and feet are 1 mm length.
FIGURE 6. A in Salamanders from the eastern Cordillera de Talamanca, Costa Rica, with descriptions of five new species (Plethodontidae: Bolitoglossa, Nototriton, and Oedipina) and natural history notes from recent expeditions
FIGURE 6. A) Dorsal and B) ventral views of preserved holotype (UCR 8391) of Oedipina nimaso. C) Dorsal view of left hand and D) left foot of holotype. Photos A and B by Humberto Lezama, C and D by A. García-Rodríguez. The bar in hand and feet are 1 mm length.
FIGURE 5 in Description of a new divergent lineage and three new species of Honduran salamanders of the genus Oedipina (Caudata, Plethodontidae)
FIGURE 5. Adult male paratype of Oedipina kasios (USNM 343456). Photograph by J. R. McCranie.
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