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Dataset results
2 results for “PRIME-DE”
dMRI data from the PRIME-DE processed by mrHARDIflow
<p>This dataset contains processed diffusion MRI data of primate subjects, DTI<sup>[1]</sup>, DIAMOND<sup>[2]</sup> and fODF<sup>[3]</sup> reconstruction and metrics. Subjects included in the dataset come from 3 sites of the PRIME-DE<sup>[4]</sup> database, specifically Aix-Marseille, UC-Davis and Mount Sinai - Philips. The data was processed using mrHARDIflow<sup>[5]</sup>, a pipeline tailored to process high resolution diffusion data. Please, cite the paper, as well as the PRIME-DE paper, if you use any data available here in your research.</p> <ol> <li>LeBihan, D., Mangin, J.-F., Poupon, C., Clark, C. A., Pappata, S., Molko, N., et al. (2001). Diffusion tensor imaging: Concepts and applications. Journal of Magnetic Resonance Imaging 13, 534–546. doi:<a href="http://doi.org/10.1002/jmri.1076">10.1002/jmri.1076</a></li> <li>Scherrer, B., Schwartzman, A., Taquet, M., Sahin, M., Prabhu, S. P., and Warfield, S. K. (2016). Characterizing brain tissue by assessment of the distribution of anisotropic microstructural environments in diffusion-compartment imaging (diamond). Magnetic Resonance in Medicine 76, 963–977. doi:<a href="http://doi.org/10.1002/mrm.25912">10.1002/mrm.25912</a></li> <li>Tournier, J.-D., Calamante, F., and Connelly, A. (2007). Robust determination of the fibre orientation distribution in diffusion mri: Non-negativity constrained super-resolved spherical deconvolution. NeuroImage 35, 1459–1472. doi:<a href="http://doi.org/10.1016/j.neuroimage.2007.02.016">10.1016/j.neuroimage.2007.02.016</a></li> <li>Milham, M. P., Ai, L., Koo, B., Xu, T., Amiez, C., Balezeau, F., et al. (2018). An open resource for non-human primate imaging. Neuron 100, 61–74. doi:<a href="http://doi.org/10.1016/j.neuron.2018.08.039">10.1016/j.neuron.2018.08.039</a></li> <li> <p>Valcourt Caron, A., Shmuel, A., Hao, Z., and Descoteaux, M. (2021). mrHARDIflow : A pipeline tailored for the preprocessing and analysis of Multi-Resolution High Angular diffusion MRI and its application to a variability study of the PRIME-DE database. bioRxiv. doi:<a href="http://doi.org/10.1101/2021.11.22.469616">10.1101/2021.11.22.469616 </a></p> </li> </ol> <p> </p>
INDI PRIME-DE dMRI Data (SRC Files)
<p>Source data: https://fcon_1000.projects.nitrc.org/indi/indiPRIME.html</p> <p>Shared under Creative Commons – Attribution-NonCommercial Share Alike (CC-BY-NC-SA)</p> <p>The dMRI were processed by FSL TOPUP/EDDY and DSI Studio to generate SRC Files.</p> <p> </p> <p> </p>
ScienceDex guides
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