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12 results for “Pocillopora acuta”
Suppl. Information to "The tropical coral Pocillopora acuta displays an unusual chromatin structure and shows histone H3 clipping plasticity upon bleaching"
<p><strong>Supplementary File 1:</strong> Multiple alignment for protein sequences of core histones with Pocillopora acuta, Pocillopora damicornis, Acropora digitifera, Nematostella vectensis, Hydra vulgaris, Schistosoma mansoni and Mus musculus. A. Histone H2A; B. Histone H2B; C. Histone H3; D. Histone H4. An asterisk (*) means that the amino acid is conserved between all species.</p> <p><strong>Supplementary File 2</strong>: Original (uncropped and unedited) images used for Figures 1 to 4.</p> <p><strong>Supplementary File 3:</strong> <em>P. acuta</em> nuclei and <em>Symbiodinium</em> count on a Thoma cell counting chamber done over three different nuclei extractions. For each extraction, two counts were performed. P. acuta nuclei were stained with Hoechst 33342 and display a blue fluorescence at 350 nm. Symbiodinium are not damaged by our extraction method and are not permeable to Hoechst. They display a red fluorescence because of their chlorophyl content. Observations were done on a Leica DMLB with objective PL Fluotar 40x and 100x. A text version of the data in the Excel file below.</p> <p>Extraction #1 replicate 1: 102 <em>P. acuta</em> nuclei (Blue) ; 2 <em>Symbiodinium</em> (Red)<br> Extraction #1 replicate 2: 112 <em>P. acuta</em> nuclei (Blue) ; 2 <em>Symbiodinium</em> (Red)</p> <p>Extraction #1 replicate 1: 42 <em>P. acuta </em>nuclei (Blue) ; 0 <em>Symbiodinium</em> (Red)<br> Extraction #1 replicate 2: 55 <em>P. acuta </em>nuclei (Blue) ; 1 <em>Symbiodinium</em> (Red)</p> <p>Extraction #1 replicate 1: 215 <em>P. acuta </em>nuclei (Blue) ; 3 <em>Symbiodinium</em> (Red)<br> Extraction #1 replicate 2: 257 <em>P. acuta</em> nuclei (Blue) ; 5 <em>Symbiodinium</em> (Red)</p> <p>Made at IHPE.</p>
Data and code for: High light alongside elevated pCO2 alleviates thermal depression of photosynthesis in a hard coral (Pocillopora acuta)
<p>Data and R scripts of analyses performed for the manuscript "<strong>High light alongside elevated pCO<sub>2</sub> alleviates thermal depression of photosynthesis in a hard coral (<em>Pocillopora acuta</em>)</strong>"</p>
Figure 2. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 2. - Pocillopora specimens previously identified as P. damicornis from the Zoological Reference Collection, Lee Kong Chian Natural History Museum, Singapore (A, B: ZRC.1980.20.133; C, D: ZRC.1991.766; E, F: ZRC.1987.1538; G, H: ZRC.1987.1995; I, J: ZRC.1991.763; K, L: ZRC.1987.1537). A–F, colonies with thick branches; G–L, colonies with thinner branches. Scale bars represent 1 cm.
Figure 3. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 3. - Maximum likelihood tree of seven Pocillopora species based on the mitochondrial open reading frame. Colonies from Singapore are shown in red. Bootstrap values (≥ 50) and Bayesian posterior probabilities (≥ 0.85) are shown for supported clades.
Figure 3. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 3. - Maximum likelihood tree of seven Pocillopora species based on the mitochondrial open reading frame. Colonies from Singapore are shown in red. Bootstrap values (≥ 50) and Bayesian posterior probabilities (≥ 0.85) are shown for supported clades.
Figure 1. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 1. - Pocillopora specimens examined in this study. In situ appearances (A: HD159, D: HD162, G: HD161, J: HD160, M: HD154), with corresponding images of bleached skeletons (B, E, H, K, N). C, live specimen showing brown ring surrounding each oral opening (image by Jenny). F, I, branches from colonies shown in D and G respectively. L, O, calices and septa from colonies shown in J and M respectively. Scale bars represent 1 cm (B, E, H, K, N) and 1 mm (F, I, L, O) respectively.
Figure 2. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 2. - Pocillopora specimens previously identified as P. damicornis from the Zoological Reference Collection, Lee Kong Chian Natural History Museum, Singapore (A, B: ZRC.1980.20.133; C, D: ZRC.1991.766; E, F: ZRC.1987.1538; G, H: ZRC.1987.1995; I, J: ZRC.1991.763; K, L: ZRC.1987.1537). A–F, colonies with thick branches; G–L, colonies with thinner branches. Scale bars represent 1 cm.
Figure 1. from: New evidence shows that Pocillopora 'damicornis-like' corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae) - Biodiversity Data Journal 5: e11407 (13 February 2017) https://doi.org/10.3897/BDJ.5.e11407
Figure 1. - Pocillopora specimens examined in this study. In situ appearances (A: HD159, D: HD162, G: HD161, J: HD160, M: HD154), with corresponding images of bleached skeletons (B, E, H, K, N). C, live specimen showing brown ring surrounding each oral opening (image by Jenny). F, I, branches from colonies shown in D and G respectively. L, O, calices and septa from colonies shown in J and M respectively. Scale bars represent 1 cm (B, E, H, K, N) and 1 mm (F, I, L, O) respectively.
Figure 8. Pocillopora acuta. A in With eyes wide open: a revision of species within and closely related to the Pocillopora damicornis species complex (Scleractinia; Pocilloporidae) using morphology and genetics
Figure 8. Pocillopora acuta. A, in situ appearance. B, skeleton of specimen. C and D, scanning electron micrographs of specimen (photos: Paul Muir). E, side view of corallum of holotype of Pocillopora acuta Lamarck, 1816 (photo: Michel Pichon). F, drawing by Esper (1791). G, P. acuta morph in situ. H, holotype of Pocillopora apiculata Ehrenberg, 1834. I, skeleton of compact morphology of P. acuta (MTQ-G66112).
Multi-locus microsatellite genotypes of Pocillopora acuta (Scleractinia: Pocilloporidae) in the Bolinao-Anda Reef Complex, Philippines
<p>This repository contains genotype data and sampling metadata used for the manuscript "Shifts in coral clonality along a gradient of disturbance: insights on reproduction and dispersal of <em>Pocillopora acuta</em>". The dataset contains genotypes of 428 <em>P. acuta </em>colonies using 16 polymorphic microsatellite loci, colony sizes, in-transect locations of each coral, and geographic coordinates of reef sites. These were used to examine clonal richness and structure, population genetic differentiation, and demographic and genetic connectivity within the reef system. In the study, we estimated the relative contribution of sexual and asexual modes of reproduction to population maintenance, and inferred the species' spatial scale of realized dispersal all against a backdrop of varying levels of wave exposure. </p>
Multi-locus microsatellite genotypes of Pocillopora acuta (Scleractinia: Pocilloporidae) in the Bolinao-Anda Reef Complex, Philippines
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The contribution of stress-tolerant endosymbiotic dinoflagellate Durusdinium to Pocillopora acuta survival in a highly urbanized reef system
<p><strong>Online Resource 1</strong> BLAST results for <em>cp23S </em>Symbiodineaceae sequences.</p> <p>Online Resource 2 BLAST results for <em>ITS2 </em>Symbiodineaceae sequences.</p> <p><strong>Online Resource 3 </strong>Summary of EDGE analysis showing DETs across genotypes and treatment comparisons with corresponding fold change values, FDR and protein matches.</p> <p><strong>Online Resource 4 </strong>Summary of DEGs across genotypes and treatment comparisons with corresponding fold change values.</p>
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