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20 results for “Pristimantis lacrimosus”
Systematics of Pristimantis lacrimosus group (Anura, Strabomantidae) with the description of a new species from the eastern slopes of the Ecuadorian Andes
<p>The data matrix has up to 4021 BP and 116 terminals from the group of species <em>Pristimantis lacrimosus</em> and closely related species.</p> <p>RAG1 position 1 = 1 - 628\3;</p> <p>RAG1 position 2 = 2 - 629\3;</p> <p>RAG1 position 3 = 3 - 630\3;</p> <p>12S = 631-1436;</p> <p>16S = 1437-3115;</p> <p>ND1 position 1 = 3116 - 4019\3;</p> <p>ND1 position 2 = 3117 - 4020\3;</p> <p>ND1 position 3 = 3118 - 4021\3;</p>
Dataset used in the paper "Contributing to the taxonomic inventory of green colored rain frogs: A new species of the Pristimantis lacrimosus group (Anura, Strabomantidae) from the southern Cordillera Azul, central Peru" by Ernesto Castillo-Urbina, Miguel Vences, César Aguilar-Puntriano, Frank Glaw & Jörn Köhler
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Aligned DNA sequence matrix for phylogenetic analyses in the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group"
<p>Aligned DNA sequence matrix for phylogenetic analyses of the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group". The matrix is in NEXUS format.</p> <p>Gene partitions are arranged as follows (tRNAs are included as part of larger adjacent genes):</p> <p>RAG1 codon position 1 = 1-625\3;<br> RAG1 codon position 2 = 2-626\3;<br> RAG1 codon position 3 = 3-627\3;<br> 12S rRNA = 628-1440;<br> 16S rRNA = 1441-3071;<br> ND1 codon position 1 = 3072-3972\3;<br> ND1 codon position 2 = 3073-3973\3;<br> ND1 codon position 3 = 3074-3974\3;</p>
Figure 4 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 4 Ancestral reconstruction for geographic basin (Pacific vs. Amazon) in the Pristimantis lacrimosus species group. Reconstructions were based on maximum likelihood inference. Pie charts at nodes represent conditional probabilities for the Pacific (black) and Amazon (green) basins. The asterisk indicates significant support for the Pacific basin as ancestral area for the most recent common ancestor of the P. lacrimosus species group. White circles indicate equivocal state, striped circles indicate distribution outside the Pacific or Amazonian basins (coded as missing data).
Figure 14 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 14 X-rays of Pristimantis nankints sp. nov. and Pristimantis romeroae sp. nov. Left, Pristimantis nankints sp. nov. holotype, QCAZ 71457; right, Pristimantis romeroae sp. nov. holotype, QCAZ 41121.
Figure 13 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 13 Variation in preserved specimens of Pristimantis romeroae sp. nov. From left to right, first and second rows: QCAZ 41121 (holotype, SVL = 31.1 mm, adult female), QCAZ 41103 (SVL = 33.8 mm, adult female), QCAZ 41128 (SVL = 31.15 mm, adult female), QCAZ 41222 (SVL = 23.8 mm, adult male). All specimens are shown at the same scale. Photographs by Julio C. Carrión.
Figure 8 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 8 Known distribution of the three new species and type localities of P. paululus, P. petersi, and P. bromeliaceus. Localities are based on specimens deposited at Museo de Zoología of Pontificia Universidad Católica del Ecuador and from Lynch (1974), Lynch (1979), and Lynch and Duellman (1990).
Figure 3 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 3 Phylogenetic relationships of the Pristimantis lacrimosus species group. Maximum likelihood tree for genes 12S, 16S, ND1 and RAG-1. SH-aLRT support (above) and non-parametric bootstrap support (below) are shown as percentages on branches. Asterisks indicate support values of 100 (bootstrap). Voucher number, species, and locality of the samples are shown next to each terminal; country is indicated by the following abbreviations: COL = Colombia, EC = Ecuador, GUY = Guyana, PAN = Panama, PER = Peru, VEN = Venezuela. The new species are shown with bold green characters. Changes in species identifications relative to the GenBank database are shown with red. Photographs show five species of the clade of green species and P. amaguanae sp. nov.. Outgroup is not shown.
Figure 1 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 1 Palmar and plantar surfaces of Pristimantis romeroae sp. nov. and X-ray of the hand A ventral view of the left foot B ventral view of left hand C X-ray of the left hand. Holotype (QCAZ 41121). Arrows point to the hyperdistal subarticular tubercles. Abbreviations: B = basal, D = distal, HD = hyperdistal. In the x-ray image, dashed lines indicate the border of soft tissoes; continuous lines indicate edges of bones.
Figure 2 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 2 X-ray images of the left hand of adult Pristimantis romeroae sp. nov. and P. crenunguis. The ratios of the length of the ultimate and penultimate phalanges of finger III are shown. Dashed lines indicate the border of soft tissues; continuous lines indicate the edge of bones. Pristimantis romeroae sp. nov., QCAZ 41121, SVL = 31.1 mm; P. crenunguis, QCAZ 56506, SVL = 46.7 mm.
Figure 7 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 7 Variation in preserved specimens of Pristimantis amaguanae sp. nov. A adult female, QCAZ 39274 (SVL = 20.4 mm) B adult male, QCAZ 39275 (SVL = 16.3 mm). Photographs by Maricela Rivera.
Figure 5 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 5 Live adult individuals A holotype of Pristimantis amaguanae sp. nov., adult female, QCAZ 39274 (SVL = 20.4 mm) B paratype of Pristimantis amaguanae sp. nov., adult male, QCAZ 39275 (SVL = 16.3 mm). Photographs by Jorge Valencia.
Figure 6 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 6 Ventral views of the left hand and foot of Pristimantis amaguanae sp. nov. Holotype (QCAZ 39274). Hyperdistal subarticular tubercles are pointed with arrows. Photographs by Julio C. Carrión.
Figure 12 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 12 Live adult individuals of the clade of green Pristimantis within the P. lacrimosus complex and their closest relatives APristimantis acuminatus, QCAZ 53845 BP. limoncochensis, QCAZ 37277 CP. enigmaticus, QCAZ 66863 DP. omeviridis, QCAZ 55392 EP. sp., QCAZ 58956 FP. nankints sp. nov. QCAZ 69137 (SVL = 19.6 mm). Photographs by Santiago R. Ron (A–B), Gustavo Pazmiño (C), Diego Quirola (D), Juan Carlos Sánchez (E) and Darwin Nuñez (F).
Figure 9 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 9 Live individuals of Pristimantis nankintsA paratype, subadult male QCAZ 69137 (SVL = 19.6 mm) B holotype, adult female QCAZ 71457 (SVL = 30.9 mm). Photographs by Darwin Nuñez (A), Gustavo Pazmiño (B).
Figure 11 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 11 Variation in preserved specimens of Pristimantis nankints sp. nov. From left to right, first and second rows: QCAZ 71457 (holotype, adult female, SVL = 30.9 mm), QCAZ 71458 (adult female, SVL = 27.8 mm), QCAZ 69137 (adult male, SVL = 19.6 mm). Photographs by Julio C. Carrión.
Figure 10 from: Ron SR, Carrión J, Caminer MA, Sagredo Y, Navarrete MJ, Ortega JA, Varela-Jaramillo A, Maldonado-Castro GA, Terán C (2020) Three new species of frogs of the genus Pristimantis (Anura, Strabomantidae) with a redefinition of the P. lacrimosus species group. ZooKeys 993: 121-155. https://doi.org/10.3897/zookeys.993.53559
Figure 10 Ventral views of the left hand and foot of Pristimantis nankints sp. nov. Holotype (QCAZ 71457). Hyperdistal subarticular tubercles are pointed with arrows. Photographs by Julio C. Carrión.
Supplementary material 1 from: Carrión-Olmedo JC, Ron SR (2021) A new species of the Pristimantis lacrimosus group (Anura, Strabomantidae) from the eastern slopes of the Ecuadorian Andes. Evolutionary Systematics 5: 151-175. https://doi.org/10.3897/evolsyst.5.62661
Collection data for Museum specimens examined in the morphological comparisons
Supplementary material 2 from: Carrión-Olmedo JC, Ron SR (2021) A new species of the Pristimantis lacrimosus group (Anura, Strabomantidae) from the eastern slopes of the Ecuadorian Andes. Evolutionary Systematics 5: 151-175. https://doi.org/10.3897/evolsyst.5.62661
Best-fit models of DNA evolution for partitions of the phylogenetic analyses
Supplementary material 3 from: Carrión-Olmedo JC, Ron SR (2021) A new species of the Pristimantis lacrimosus group (Anura, Strabomantidae) from the eastern slopes of the Ecuadorian Andes. Evolutionary Systematics 5: 151-175. https://doi.org/10.3897/evolsyst.5.62661
Mitochondrial DNA and RAG1 phylogenetic trees
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