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16 results for “Prochlorotrichaceae”
FIGURE 8 in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 8. Color-coded secondary structure of Box-B helices and alignment of the selected set of sequences of Nodosilinea. The black color with white letters indicates conservative regions, gray areas denotes variable parts. Notice that sequences of the terminal loop are placed in the boxes within the alignment
FIGURE 6. Bayesian 16S-23S in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 6. Bayesian 16S-23S ITS rRNA phylogeny showing the position of the Nodosilinea svalbardensis. Symbol "-" show support less than 50% on representative nodes. Taxa in the quotation mark needs to be revised. Note type species of Nodosilinea, N. nodulosa UTEX 2910.
FIGURE 7 in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 7. Color-coded secondary structure of D1-D1' helices of the 16S-23S ITS region and its alignment for 5 representative species of Nodosilinea. Circles near N. svalbardensis indicate differences with closely related N. bijuigata.
FIGURE 4 in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 4. Line drawings of Nodosilinea svalbardensis. A. Culture material. B. Natural populations. Note clearly visible sheaths in the natural populations. Numbers indicate morphological features: 1—false branching, 2—nodule, 3—attached hormogonia, 4—necridia, 5—granules.
FIGURE 5. 16S rRNA Bayesian phylogeny with a in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 5. 16S rRNA Bayesian phylogeny with a total of 181 sequences from order Synechococcales/Gloeobacterales, including 75 sequences from genus Nodosilinea, showing evolutionary lineage corresponds to new species Nodosilinea svalbardensis, Symbol "-" show support less than 50% on representative nodes. The type sequences of established Nodosilinea spp. are given in bold font. Taxa in the quotation mark needs to be revised.
FIGURE 2. Habitat and the substrate where Nodosilinea svalbardensis was found. A in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 2. Habitat and the substrate where Nodosilinea svalbardensis was found. A. The habitat in the river valley. B. Macrocolony of Nostoc commune under which N. svalbardensis occurred.
FIGURE 3 in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE 3. DIC micro-photographs of Nodosilinea svalbardensis. A. Demonstration of the nodules. B. Illustration of the single false branching. C. Close up look on the peripheral thylakoids arrangement. Numbers indicate morphological features: 1—nodules, 2—granules within the cells, 3—false branching, 4—necridia.
FIGURE. 1 in New cyanobacterium Nodosilinea svalbardensis sp. nov. (Prochlorotrichaceae, Synechococcales) isolated from alluvium in Mimer river valley of the Svalbard archipelago
FIGURE. 1. Map showing sampling site (red circles) in the Svalbard archipelago. Free products of ©Norwegian Polar Institute (http:// www.npolar.no) were used to reproduce the map.
FIGURE 8 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 8. Comparative analysis of V2 and V3 helix of 16S-23S ITS region of test strain AP3b (Aerofilum fasciculatum) with the genera of Oculatellaceae family. a-g. V2 helix. h-n. V3 helix.
FIGURE 4 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 4. Transmission electron microscopy of strain AP3 and AP3b. a and b. Cross-section of a part of filament of strain AP3 showing thylakoidal arrangement and granulations. c and d. Cross-sectional view of cell of strain AP3b showing aerotopes distributed throughout the cell. th = thylakoids; pg = polyphosphate granules; cb = carboxysomes; cw = cell wall; ms = mucilaginous sheath; gv = gas vesicles.
FIGURE 1 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 1. Map showing the location of sample collection sites of the Sundarbans forest located in the state of West Bengal, India. Samples were collected from the Sagar and the Lothian island of Indian Sundarbans. Blue pin = Sagar island; Red pin = Lothian island
FIGURE 2 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 2. Light microscopy of strain AP3 and AP3b (non-axenic cultures). a and b. Microphotographs showing the filaments of strain AP3. c and d. Microphotographs showing the filaments of strain AP3b. Filaments observed in a & c were from exponential phase and in b & d were from stationary phase of the growth period for the respective strains. Scale = 10 µm
FIGURE 6 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 6. Comparative analysis of D1-D1' helix, Box-B and V2 helix of 16S-23S ITS region of test strain AP3 (Euryhalinema pallustris) and reference strain Euryhalinema mangrovii. a-b. D1-D1' helix. c-d. Box-B helix. e-f. V2 helix
FIGURE 3 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 3. Scanning electron microscopy of strains AP3 and AP3b. a, c and d. Filaments of strain AP3. b. Filaments of strain AP3b (nonaxenic) showing a hormogonium and a necridic cell. e and f. Filaments of strain AP3b showing presence of a facultative mucilaginous sheath. hg = hormogonium; nc = necridic cell; ms = mucilaginous sheath
FIGURE 5 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 5. Phylogenetic tree based on 16S rRNA gene sequences of total 115 OTUs belonging to 3 families of Synechococcalean order and Gloeobacter violaceus as outgroup. Bootstrapping with 1000 resamplings was performed. Support values are ML bootstrap/ BI posterior probability. Scores denoted by '-' for any node showed no support in that analysis. The investigated strains with clones (AP3 and AP3b) are shown in bold. Taxon name in quotation mark, e.g. "Calothrix" in our opinion represents an incorrectly submitted sequence and requires revision. Collapsed clades can be viewed expanded in Fig. S1. Designation of families according to Mai et al. (2018).
FIGURE 7 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 7. Comparative analysis of D1-D1' helix and Box-B helix of 16S-23S ITS region of test strain AP3b (Aerofilum fasciculatum) with the genera of Oculatellaceae family. a-g. D1-D1' helix. h-n. Box-B helix.
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