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132 results for “Prunus avium”
Potential and realized distribution at 30m for Sweet cherry (Prunus avium) in Europe for 2000 - 2020
<p>Probability and uncertainty maps showing the potential and realized distribution for the sweet cherry (<em>Prunus avium, L.</em>) for Europe from the dataset prepared by <a href="http://doi.org/10.5281/zenodo.5818021">Bonannella et al. (2022)</a> and predicted using Ensemble Machine Learning (EML). Potential distribution map cover the period 2018 - 2020; realized distribution cover the period 2000 - 2020, split in the following time periods:</p> <ul> <li>2000 - 2002,</li> <li>2002 - 2006,</li> <li>2006 - 2010,</li> <li>2010 - 2014,</li> <li>2014 - 2018,</li> <li>2018 - 2020.</li> </ul> <p>Files are named according to the following naming convention, e.g:</p> <ul> <li>veg_prunus.avium_anv.eml_md_30m_0..0cm_2000..2002_eumap_epsg3035_v0.3</li> </ul> <p>with the following fields:</p> <ul> <li>theme: e.g. <strong>veg</strong>,</li> <li>species code: e.g. <strong>prunus.avium</strong>,</li> <li>species distribution type: e.g. <strong>anv</strong> (= actual natural vegetation),</li> <li>species estimation method: e.g. <strong>eml</strong>,</li> <li>species estimation type: e.g. <strong>md</strong> ( = model deviation),</li> <li>resolution in meters e.g. <strong>30m</strong>,</li> <li>reference depths (vertical dimension): e.g. <strong>0..0cm</strong>,</li> <li>reference period begin end: e.g. <strong>2000..2002</strong>,</li> <li>reference area: e.g. <strong>eumap</strong>,</li> <li>coordinate system: e.g. <strong>epsg3035</strong>,</li> <li>data set version: e.g. <strong>v0.3</strong>.</li> </ul> <p>For each species is then easy to identify probability and uncertainty distribution maps:</p> <ul> <li>veg_prunus.avium_<strong>anv</strong>.eml_<strong>md</strong>: model uncertainty for realized distribution</li> <li>veg_prunus.avium_<strong>anv</strong>.eml_<strong>p</strong>: probability for realized distribution</li> <li>veg_prunus.avium_<strong>pnv</strong>.eml_<strong>md</strong>: model uncertainty for potential distribution</li> <li>veg_prunus.avium_<strong>pnv</strong>.eml_<strong>p</strong>: probability for potential distribution</li> </ul> <p>Files are provided as <a href="https://gdal.org/drivers/raster/cog.html">Cloud Optimized GeoTIFFs</a> and projected in the Coordinate Reference System ETRS89 / LAEA Europe (= EPSG code 3035). Styling files are provided in both <em>SLD</em> and <em>QML</em> format.</p> <p>If you would like to know more about the creation of the maps and the modeling:</p> <ul> <li><strong>watch</strong> the talk at Open Data Science Workshop 2021 (<a href="https://doi.org/10.5446/55256">TIB AV-PORTAL</a>)</li> <li><strong>access </strong>the repository with our R/Python scripts and follow the instructions (<a href="https://gitlab.com/geoharmonizer_inea/spatial-layers/-/tree/master/veg_mapping">GitLab</a>)</li> <li><strong>access </strong>the repository with the training dataset (<a href="https://doi.org/10.5281/zenodo.5818021">Zenodo</a>)</li> <li><strong>read </strong>the tutorial with executable code on our <a href="https://opengeohub.github.io/spatial-prediction-eml/spatiotemporal-ml.html#spatiotemporal-distribution-of-fagus-sylvatica">GitBook</a></li> </ul> <p> </p> <p>A publication describing, in detail, all processing steps, accuracy assessment and general analysis of species distribution maps is available on <a href="https://doi.org/10.7717/peerj.13728">PeerJ</a>. To suggest any improvement/fix use <a href="https://gitlab.com/geoharmonizer_inea/spatial-layers/-/issues">https://gitlab.com/geoharmonizer_inea/spatial-layers/-/issues</a>.</p>
Herbarium specimen image of Prunus avium L., part of the collection of Botanic Garden and Botanical Museum Berlin
Part of a training dataset of scanned herbarium specimens. The data paper and a summary landing page will be published on Zenodo as it gets published.<br><br>Content of this deposition:<br><br>- A JSON-LD datafile listing the label data associated with this herbarium specimen. The Darwin and Dublin Core data standards are used for most values.<br>- A JPEG image file of the scanned herbarium sheet.<br>- A lossless TIFF image from which the JPEG image has been derived.
Figure 5. A minimum evolution tree using cytochrome c oxidase subunit 1 in DNA barcoding of black cherry aphid Myzus cerasi (Fabricus, 1775) (Hemiptera: Aphididae) populations collected from Prunus avium and Prunus cerasus
Figure 5. A minimum evolution tree using cytochrome c oxidase subunit 1 sequences from Myzus cerasi populations.
Figure 2 in DNA barcoding of black cherry aphid Myzus cerasi (Fabricus, 1775) (Hemiptera: Aphididae) populations collected from Prunus avium and Prunus cerasus
Figure 2. Sampling locations of Myzus cerasi in different geographical regions of Turkey (Google Earth).
Figure 4. A maximum likelihood tree using cytochrome c oxidase subunit 1 in DNA barcoding of black cherry aphid Myzus cerasi (Fabricus, 1775) (Hemiptera: Aphididae) populations collected from Prunus avium and Prunus cerasus
Figure 4. A maximum likelihood tree using cytochrome c oxidase subunit 1 sequences from Myzus cerasi populations.
Prunus avium L. (BR0000010610893)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010610862)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609804)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010610831)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010610190)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010608661)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000012594030)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609538)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609941)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000005355600)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000012194872)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609170)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010610756)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609149)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Prunus avium L. (BR0000010609736)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
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International Brain Laboratory public data
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OpenNeuro
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