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5 results for “R Software”
Software Tools to Collect and Use Provenance in R
The software tools that scientists use to process and analyze data are typically optimized for performance and ease of use. Few if any such tools are designed to capture and record the details of what happens as the tool performs its task. This detailed information, and more generally the history of an item of data from its creation to its present state, is known as provenance. Provenance has the potential to make science more transparent, reliable, and reproducible. This project focused on collecting and using provenance for scripts written in the R statistical language, which is widely used by ecologists and environmental scientists for data analysis and visualization. Our tools include a provenance collector (rdtLite), which collects provenance as an R script executes (or during a console session), as well as other tools that use the collected provenance to document and visualize the execution or to support activites such as script debugging. The R packages included here are also available on CRAN. For more details, see the project website on GitHub (https://end-to-end-provenance.github.io).
Bayesian Methodology: An overview with the help of R software
<p>Bayesian methodology differs from traditional statistical methodology which involves frequentist approach. Bayesian methodology was introduced by Thomas Bayes (Statistician and minister at the Presbyterian Chapel) during the 18<sup>th</sup> Century. Bayesian methodology is now widely being used due to its simple, straightforward and interpretable characteristics of probability values and the efficiency of modern day computer systems.</p> <p>Bayesian methodology is now being used in the field of clinical research, clinical trials, epidemiology, econometrics, statistical process control, marketing research and statistical mechanics. It also used in the emerging field such as data science (machine learning and deep learning) and big data analytics.</p> <p>The book provides an overview of Bayesian methodology, its uses in different fields with the help of R statistical open source software.</p> <p><a href="https://www.amazon.com/dp/B07QCHTR54">https://www.amazon.com/dp/B07QCHTR54</a></p> <p><strong>ISBN-13: 978-1092939898</strong></p> <p> </p> <p><strong>Editor</strong></p> <p><strong>International Journal of Statistics and Medical Informatics</strong></p> <p><a href="http://www.ijsmi.com/book.php"><strong>www.ijsmi.com/book.php</strong></a></p>
Agile Minds, Innovative Solutions, and Industry–Academia Collaboration: Lean R&D Meets Problem-based Learning in Software Engineering Education
<p>Supplementary materials of the paper "Agile Minds, Innovative Solutions, and Industry–Academia Collaboration: Lean R&D Meets Problem-based Learning in Software Engineering Education"</p>
Transformed raw data and R scripts for the paper Problem reports and team maturity in agile automotive software development published at CHASE2022
<p>Transformed raw data and R scripts for the paper Problem reports and team maturity in agile automotive software development published at CHASE2022</p> <p>15th International Conference on Cooperative and Human Aspects of Software Engineering, May 21–22, 2022, Pittsburgh, PA, USA}´</p>
Data and R Code from "PAT-GEOM: A Software Package for the Analysis of Animal Patterns" (published in Methods in Ecology and Evolution)
<p>Datasets for Figures 2 and 4 in the article "PAT-GEOM: A Software Package for the Analysis of Animal Patterns" (published in Methods in Ecology and Evolution) and the R code used to perform the analysis described in the article.</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.