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datasets available to search
ShareScore release 0.7.1
Dataset results
23 results for “RPB1”
FIGURE 1. Phylogenetic tree generated from the combined nrSSU, rpb1 and rpb2 in Ophiocordyceps highlandensis, a new entomopathogenic fungus from Yunnan, China
FIGURE 1. Phylogenetic tree generated from the combined nrSSU, rpb1 and rpb2 dataset using ML method. Bootstrap values (≥ 50%) derived from ML analyses and posterior probabilities from Bayesian inference (≥ 0.90) are shown above or beneath the branches at nodes. Ophiocordyceps highlandensis is highlighted in boldface. "Stroma 1" and "Stroma 2" are used to relate individual stromata of the same collection to their corresponding sequence data.
FIGURE 1. Bayesian phylogram obtained from general rpb1 in Strobilomyces pteroreticulosporus (Boletales), a new species of the S. strobilaceus complex from the Republic of Korea and remarks on the variability of S. confusus
FIGURE 1. Bayesian phylogram obtained from general rpb1 sequence alignment. Porphyrellus porphyrosporus was used as outgroup taxon. Support values in either Bayesian (Posterior Probabilities values, BPP) or maximum likelihood (ML Bootstrap percentage, MLB) analyses are indicated. Only BPP values over 0.70 and MLB values over 50 % are given above clade branches. Newly sequenced collections are in bold.
RPB1 mutants sensitive to 6-AU
GEO Series GSE2831. Saccharomyces cerevisiae. 14 samples. Type: Expression profiling by array.
ChIP-seq analysis of Rpb1 from 12hr conjugating Oxytricha trifallax cells
GEO Series GSE55703. Oxytricha trifallax. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RPB1 ChIP-Seq of adrenal glands tissue from Wild Type (WT) and Armc5 knockout mice
GEO Series GSE169578. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RPB1 ChIP-Seq of NSC from Wild Type (WT) and Armc5 knockout mice
GEO Series GSE169582. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - 4tU cordycepin treatment with rpb1 slow mutant
GEO Series GSE160994. Saccharomyces cerevisiae. 20 samples. Type: Expression profiling by high throughput sequencing.
The interaction between the Spt6-tSH2 domain and Rpb1 affects multiple functions of RNA Polymerase II [MNase-seq]
GEO Series GSE189831. Saccharomyces cerevisiae. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide binding of Rpb1 (the largest subunit of the RNA polymerase II) to the chromatin state in bud27∆ and wild-type mutant strains (ChIP-seq)
GEO Series GSE134534. Saccharomyces cerevisiae. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RNA-seq analysis in WT and rpb1-CTD-S2A strains
GEO Series GSE171307. Schizosaccharomyces pombe. 4 samples. Type: Expression profiling by high throughput sequencing.
Expression profiling of rpb1-12XWTCTD and rpb1-12XS2ACTD fission yeast strains.
GEO Series GSE31369. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 12 samples. Type: Expression profiling by array.
The Rtf1/Prf1-dependent histone modification axis and Rpb1 C-terminal domain phosphorylation counteract multi-drug resistance in fission yeast [RNA-seq]
GEO Series GSE248361. Schizosaccharomyces pombe. 72 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of Spt6 occupancy in yeast strains with mutations in Spt6 and Rpb1
GEO Series GSE98405. Nakaseomyces glabratus; Saccharomyces cerevisiae. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The Rtf1/Prf1-dependent histone modification axis and Rpb1 C-terminal domain phosphorylation counteract multi-drug resistance in fission yeast [ChIP-seq]
GEO Series GSE248360. Schizosaccharomyces pombe. 64 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-chip data of Rrm3-Flag in wild-type and rpb1-1 cells
GEO Series GSE55184. Saccharomyces cerevisiae. 4 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Modification of C-terminal Domain (CTD) of RPB1 plays a role in transcriptome change upon salt stress
GEO Series GSE60700. Saccharomyces cerevisiae. 9 samples. Type: Expression profiling by array.
The interaction between the Spt6-tSH2 domain and Rpb1 affects multiple functions of RNA Polymerase II
GEO Series GSE184954. Saccharomyces cerevisiae. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dysregulated RPB1 is a targetable master driver of overgrowth in acute myeloid leukemia.
GEO Series GSE126000. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Spt6-tSH2 domain and Rpb1
GEO Series GSE184955. Saccharomyces cerevisiae. 48 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The consequences of RPB1-CTD truncation for human transcriptome dynamics
GEO Series GSE159092. Homo sapiens. 50 samples. Type: Expression profiling by high throughput sequencing; Other.
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International Brain Laboratory public data
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OpenNeuro
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