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8 results for “Rotation Electron Diffraction”
Continuous rotation electron diffraction data for Zeolite Mordenite
<p><strong>Raw continuous rotation electron diffraction data for mordenite:</strong><br> <br> - mordenite_cRED_1.zip<br> - mordenite_cRED_2.zip</p> <p>The zip file contains 3 directories<br> <br> - SMV: Diffraction data (stretch correction applied) in SMV format<br> - Tiff: Raw diffraction data in 16-bit unsigned integer TIFF format<br> - Defocused images in 16-bit unsigned integer TIFF format</p> <p>Experimental parameters are stored in the header files of the SMV images, and in the file cRED_log.txt<br> The SMV data can be processed using XDS.</p> <p><br> <strong>Raw serial electron diffraction data sets for mordenite:</strong></p> <p> - mordenite_SerialED.zip</p> <p>The zip file contains at least 3 directories:</p> <p> - calib: contains the calibration files for the experiment<br> - data: contains the raw diffraction data for all the identified crystals in hdf5 format<br> - images: contains the image data used to locate crystals in hdf5 format</p> <p>Experimental parameters (such as the crystal coordinates) are stored in the attributes on the data files. The Python code to process the data can be found in the problematic-0.1.0.zip folder or on http://github.com/stefsmeets/problematic<br> Prediction scores for all diffraction patterns are given in `learning.csv`<br> </p>
BIR-MicroED: selected area electron diffraction datasets from slowly rotating (0.09 degrees/second) microcrystals (biotin, Zn(II)-methionine, and Co(II)-porphyrin) at 200 keV
<p>This deposition contains a series zip files each containing electron diffraction datasets in .mrc file format. Each folder collects data acquired from crystals of a particular compound under the same conditions (electron energy, temperature). Zip files are named according to the format: <em>"CompoundName</em>_slowrotation_0pp09dps_tiltseries_<em>Temperature</em>.zip"</p> <p>Diffraction datasets within each folder are named according to the format: <em>"CompoundName</em>_slowrotation_0p09dps_tiltseries_<em>AcceleratingVoltage</em>_<em>Temperature</em>_series#.mrc"</p>
Rotation Electron Diffraction Processing (REDp) Dataset
<p>RED data collected on garnet crystal</p>
Continuous rotation electron diffraction data for zeolite SSZ-27
<p><strong>Raw data for SSZ-27 (as-synthesized)</strong></p> <p>The directories labeled <strong>S**</strong> contain the raw data for the SSZ-27 phase, those labeled <strong>C**</strong> for the SSZ-26 impurity.</p> <p>Each directory contains the following:</p> <ul> <li>cred_log.txt, data collection log file</li> <li>SMV, Directory with data in SMV format and XDS processing output</li> <li>tiff, Directory with raw data in TIFF format</li> <li>tiff_image, Directory with defocused images showing the position of the crystal</li> <li>pets.pts, input file for PETS</li> <li>beam_centers.txt, a table with the position of the primary beam</li> </ul> <p>Then there are three other directories:</p> <ul> <li>XSCALE, contains the scaling results from the 14 SSZ-27 crystals that were used for the cluster analysis</li> <li>SSZ-26_cluster_1, contains the clustering results and refinement data for SSZ-26</li> <li>SSZ-27_cluster_4, contains the clustering results and refinement data for SSZ-27</li> </ul> <p>The data were collected using the software <a href="https://github.com/stefsmeets/instamatic">instamatic</a> and processed using <a href="http://xds.mpimf-heidelberg.mpg.de/">XDS</a>/<a href="https://github.com/stefsmeets/edtools">edtools</a>.</p>
Serial Rotation Electron Diffraction (automated continuous RED) raw data sets
<p><strong>Serial Rotation Electron Diffraction (automated continuous RED) raw data sets </strong></p> <p>Containing:</p> <p>TIFF images for particle recognition</p> <p>SMV files for XDS processing</p> <p>XDS input files (automatically generated)</p>
Serial rotation electron diffraction raw data
<p>Raw serial rotation electron diffraction datasets from two mixture zeolite products (Product A and B). </p> <p>The data folder of each Product contains the following directories or files:</p> <ul> <li>calib: contains the calibration files for the experiment</li> <li>experiment: contains the raw rotation diffraction data (SMV format) for the identified crystals at each stage position.</li> <li>Dials_indexing.log: contains the on-the-fly unit cell identification results from DIALS</li> </ul> <p>The datasets for the structure determination of IWV, CTH, and RTH phases in Product A are listed in the folder named "Selected_datasets_for_structure_determination_of_IWV_CTH_and_RTH_in_Product_A"</p> <p>The Python code to process the data can be found at https://doi.org/10.5281/zenodo.5727189</p>
Rotational electron diffraction patterns of TIA-1 prion-like domain, A381T mutant
<p>Rotational electron diffraction patterns of TIA-1 prion-like domain, A381T mutant. Collected with a JEOL CRYO ARM 300 electron microscope operated at an accelerating voltage of 300kV on a DirectElectron DE64 detector at RIKEN, SPring-8 Center. The PDB ID associated with this data is 7VI5.The PDB ID associated with this data is 7VI4.</p>
Rotational electron diffraction patterns of TIA-1 prion-like domain, wild type
<p>Rotational electron diffraction patterns of TIA-1 prion-like domain, wild type. Collected with a JEOL CRYO ARM 300 electron microscope operated at an accelerating voltage of 300kV on a DirectElectron DE64 detector at RIKEN, SPring-8 Center. The PDB ID associated with this data is 7VI5.</p>
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