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34 results for “SWIR”
The Brazilian Soil Spectral Library (VIS-NIR-SWIR-MIR) Database: Open Access
<p><strong>Abstract:</strong></p> <p>NEW VERSION V.002 (Some Lat Long Coordinates added).</p> <p>Soil spectroscopy has emerged as a solution to the limitations associated with traditional soil surveying and analysis methods, addressing the challenges of time and financial resources. Analyzing the soil's spectral reflectance enables to observe the soil composition and simultaneously evaluate several attributes because the matter, when exposed to electromagnetic energy, leaves a "spectral signature" that makes such evaluations possible. The Soil Spectral Library (SSL) consolidates soil spectral patterns from a specific location, facilitating accurate modeling and reducing time, cost, chemical products, and waste in surveying and mapping processes. Therefore, an open access SSL benefits society by providing a fine collection of free data for multiple applications for both research and commercial use.</p> <p><strong>BSSL Description and Usefulness</strong></p> <p>The Brazilian Soil Spectral Library (BSSL), available at <a href="https://bibliotecaespectral.wixsite.com/english">https://bibliotecaespectral.wixsite.com/english</a>, is a comprehensive repository of soil spectral data. Coordinated by JAM Demattê and managed by the GeoCiS research group, the BSSL was initiated in 1995 and published by Demattê and collaborators in 2019. This initiative stands out due to its coverage of diverse soil types, given Brazil's significance in the agricultural and environmental domains and its status as the fifth largest territory in the world (IBGE, 2023). In addition, a Middle Infrared (MIR) dataset has been published (Mendes et al., 2022), part of which is included in this repository. The database covers 16,084 sites and includes harmonized physicochemical and spectral (Vis-NIR-SWIR and MIR range) soil data from various sources at 0-20 cm depth. All soil samples have Vis-NIR-SWIR data, but not all have MIR data.</p> <p>The BSSL provides open and free access to curated data for the scientific community and interested individuals. Unrestricted access to the BSSL supports researchers in validating their results by comparing measured data with predicted values. This initiative also facilitates the development of new models and the improvement of existing ones. Moreover, users can employ the library to test new models and extract information about previously unknown soil properties. With its extensive coverage of tropical soil classes, the BSSL is considered one of the most significant soil spectral libraries worldwide, with 42 institutions and 61 researchers participating. However, 47 collaborators from 29 institutions have authorized the data opening. Other researchers can also provide their data upon request through the coordinator of this initiative.</p> <p>The data from the BSSL project can also help wet labs to improve their analytical capabilities, contributing to developing hybrid wet soil laboratory techniques and digital soil maps while informing decision-makers in formulating conservation and land use policies. The soil's capacity for different land uses promotes soil health and sustainability.</p> <p><strong>Coverage</strong></p> <p>The BSSL data covers all regions of Brazil, including 26 states and the Federal District. It is in a <em>.xlsx</em> format and has a total size of 305 Mb. The table is structured in sheets with rows for observations, and columns, representing various soil attributes in the surface layer, from 0 to 20 cm depth. The database includes environmental and physicochemical properties (22 columns and 16,084 rows), Vis-NIR-SWIR spectral bands (2151 columns and 16,084 rows), and MIR channels (681 columns and 1783 rows). An ID unique column can merge the sheet for each attribute or spectral range.</p> <p><strong>Accessing original data source</strong></p> <p>Using these data requires their reference in any situation under copyright infringement penalty. Three mechanisms are available for users to reach the original and complete data contributors:</p> <p>a) Refer to sheet two for name and code-based searches;</p> <p>b) Visit the website <a href="https://bibliotecaespectral.wixsite.com/english/lista-de-cedentes">https://bibliotecaespectral.wixsite.com/english/lista-de-cedentes</a> or locate the contributors' list by Brazilian state;</p> <p>c) Visit the website of the Brazilian Soil Spectral Service – Braspecs <a href="http://www.besbbr.com.br/">http://www.besbbr.com.br/</a>, an online platform for soil analysis that uses part of the current SSL (Demattê et al., 2022) - It was developed and managed by GeoCiS. There, owners from all over the country can be found.</p> <p><strong>Proceeding to data analysis</strong></p> <p>We registered and organized the samples at the ESALQ/USP Soil Laboratory. Some samples arrived without preliminary data analyses, so we analyzed them for soil organic matter (SOM), granulometry, cation exchange capacity (CEC), pH in water, and the presence of Ca, Mg, and Na, following the recommendations of Donagemma et al. (2011).</p> <p>The GeoCiS research group performed spectral analyses following the procedures described by Bellinaso et al. (2010). Demattê et al. (2019) provide detailed methods for sampling, preparation, and soil analyses, including reflectance spectroscopy. Latitude and longitude data can be requested directly from the data owner. In summary, the following steps are involved in data acquisition.</p> <p>a) We subjected the soil samples to a preliminary treatment, which involved drying them in an oven at 45°C for 48 hours, grinding them, and sieving them through a 2mm mesh;</p> <p>b) We placed the samples in Petri dishes with a diameter of 9 cm and a height of 1.5 cm;</p> <p>c) We homogenized and flattened the surface of the samples to reduce the shading caused by larger particles or foreign bodies, making them ready for spectral readings;</p> <p>d) The spectral analyses took place in a darkened room to avoid interference from natural light. We used a computer to record the electromagnetic pulses through an optical fiber connected to the sensor, capturing the spectral response of the soil sample;</p> <p>e) We obtained reflectance data in the Visible-Near Infrared-Shortwave Infrared (Vis-NIR-SWIR) range using a FieldSpec 3 spectroradiometer (Analytical Spectral Devices, ASD, Boulder, CO), which operates in the spectral range from 350 to 2500 nm;</p> <p>f) The sensor had a spectral resolution of 3 nm from 350-700 nm and 10 nm from 700-2500 nm, automatically interpolated to 1 nm spectral resolution in the output data, resulting in 2151 channels (or bands); and</p> <p>g) We positioned the lamps at 90° from each other and 35 cm away from the sample, with a zenith angle of 30°.</p> <p>The sensor captured the light reflected through the fiber optic cable, which was positioned 8 cm from the sample's surface.</p> <p>We used two 50W halogen lamps as the power source for the artificial light. It's important to note that we took three readings for each sample at different positions by rotating the Petri dish by 90°.</p> <p>Each reading represents the average of 100 scans taken by the sensor. From these three readings, we calculated the final spectrum of the samples. Notably, the laboratory's equipment and procedures for soil sample spectral analyses followed the ASD's recommendations, particularly about sensor calibration using a white spectralon plate as a 100% reflectance standard.</p> <p>For the analysis in the Middle Infrared (MIR) spectral region, we followed the procedures outlined by Mendes et al. (2022). We milled the soil fraction smaller than 2 mm, sieved it to 0.149 mm, and scanned it using a Fourier Transform Infrared (FT-IR) alpha spectroradiometer (Bruker Optics Corporation, Billerica, MA 01821, USA) equipped with a DRIFT accessory.</p> <p>The spectroradiometer measured the diffuse reflectance using Fourier transformation in the spectral range from 4000 cm<sup>-1</sup> to 600 cm<sup>-1</sup>, with a resolution of 2 cm<sup>-1</sup>. We conducted these measurements in the Geotechnology Laboratory of the Department of Soil Science at Esalq-USP. We took the average of 32 successive readings to obtain a soil spectrum. Sensor calibration took place before each spectral acquisition of the sample set by standardizing it against the maximum reflectance of a gold plate.</p> <p> </p> <p><strong>Dataset characterization</strong></p> <p>The database, named BSSL_DB_Key_Soils, has five sheets containing the key soil attributes, Vis-NIR-SWIR and MIR datasets, descriptions of the contributors and the proximal sensing methods used for spectral soil analysis. The sheets can be linked by "ID_Unique" columns, which bring the corresponding rows according to the data type. Some cells are empty because collaborators have already provided data in this way. However, we have decided to keep them in the database because they have other soil key attributes. Every Column in the data sheets is described as follows:</p> <p> </p> <p><strong>Sheet 1. BSSL_Soil_Attributes_Dataset</strong></p> <p>Column 1. <strong>ID_unique</strong>: Sequential code assigned to every record;</p> <p>Column 2. <strong>Owner code</strong>: Acronym assigned to each contributor who allowed access to their proprietary data;</p> <p>Column 3. <strong>Vis_NIR_SWIR_availability</strong>: availability of spectral data in visible, near-infrared, and shortwave infrared ranges;</p> <p>Column 4. <strong>MIR_availability</strong>: availability of spectral data in the middle infrared range;</p> <p>Column 5. <strong>Sampling</strong>: type of soil sampling;</p> <p>Column 6. <strong>Depth_cm</strong>: soil surface layer depth in centimeters; </p> <p>Column 7. <strong>Lat</strong>: Latitude; </p> <p>Column 8. <strong>Lat</strong>: Longitude; </p> <p>Column 9. <strong>Region</strong>: Brazilian geographical region of samples' source;</p> <p>Column 10. <strong>Municipality</strong>: Brazilian municipality of samples' source;</p> <p>Column 11. <strong>State</strong>: Brazilian Federation Unit of samples' source;</p> <p>Column 12. <strong>Vegetation</strong>: type of vegetal covering;</p> <p>Column 13. <strong>Biome</strong>: groupings of ecosystems that share similar characteristics and span different regions;</p> <p>Column 14. <strong>Geology</strong>: type of rock matter from local soil sampling;</p> <p>Column 15. <strong>Sand_gkg</strong>: Content of the soil fraction with grain size between 2 and 0.053 mm, expressed in grams per kilogram;</p> <p>Column 16. <strong>Clay_gkg</strong>: Content of soil fraction with grain size smaller than 0.002 mm, expressed in grams per kilogram;</p> <p>Column 17. <strong>SOM_gkg</strong>: Soil organic matter content, expressed in grams per kilogram;</p> <p>Column 18. <strong>pH_H2O</strong>: Soil hydrogen ion potential measured in water;</p> <p>Column 19. <strong>Ca_mmolkg</strong>: Exchangeable calcium content in the soil, expressed in millimoles per kilogram;</p> <p>Column 20. <strong>Mg_mmolkg</strong>: Exchangeable magnesium content in the soil, expressed in millimoles per kilogram;</p> <p>Column 21. <strong>Na_mmolkg</strong>: Exchangeable sodium content in the soil, expressed in millimoles per kilogram; and</p> <p>Column 22. <strong>CEC_Ph7_mmolkg</strong>: Cation exchange capacity of the soil at neutral pH, expressed in millimoles per kilogram.</p> <p> </p> <p><strong>Sheet 2. BSSL_Vis_NIR_SWIR_Dataset</strong></p> <p>Column 1. <strong>ID_Unique</strong>: Sequential code assigned to every record;</p> <p>Column 2. <strong>Owner code</strong>: Acronym assigned to each contributor who allowed access to their proprietary data; and</p> <p>Column 3 – 2153. <strong>350 – 2500</strong>: Reflectance in 2151 spectral bands in nanometers from visible and near-infrared to shortwave infrared range (350 – 2500 nm).</p> <p> </p> <p><strong>Sheet 3. BSSL_MIR_Dataset</strong></p> <p>Column 1. <strong>ID_Unique:</strong> Sequential code assigned to every record;</p> <p>Column 2. <strong>Owner_code:</strong> Acronym assigned to each contributor who allowed access to their proprietary data; and</p> <p>Column 3 – 683. <strong>4000 – 600:</strong> Reflectance in 681 spectral bands in centimeters in the middle infrared range (4000 – 600 cm<sup>-1</sup>).</p> <p> </p> <p><strong>Sheet 4. Contributors</strong></p> <p>Column 1. <strong>Owner_code</strong>: Acronym assigned to each contributor who allowed access to their proprietary data, which identifies and links it to datasets;</p> <p>Column 2. <strong>Owner</strong>: Name of the collaborator who agreed to the availability of the data;</p> <p>Column 3. <strong>E-mail</strong>: Contact the e-mail of the owner for more information or a data request;</p> <p>Column 4. <strong>Institution</strong>: Contributor's affiliation;</p> <p>Column 5. <strong>Samples NIR</strong>: Number of Vis-NIR-SWIR samples sent to the BSSL collection;</p> <p>Column 6. <strong>Samples MIR</strong>: Number of MIR samples sent to the BSSL collection;</p> <p> </p> <p><strong>Sheet 5. Metadata</strong></p> <p>Column 1. <strong>Material and Methods</strong>: Description of procedures performed for soil data analyses</p> <p> </p> <p><strong>Expectation and Social Relevance</strong></p> <p>These data can impact various disciplines such as soil surveying, soil attribute mapping, soil analysis, soil mineralogy, soil management zones, precision agriculture, development of new datasets and scientific groups, and others. We expect this contribution to be valuable and useful to the soil research community in promoting this non-renewable natural resource's conservation and sustainable use.</p>
SWIR abyssal peridotites EBSD and microprobe datasets
<p>The crystallographic preferred orientation (CPO) of olivine, pyroxenes, spinel, and amphibole was measured in 17 selected samples using a JEOL JSM 5600 at the Geosciences Montpellier EBSD facility, with 17 kV acceleration voltage and 24 mm working distance. For each thin section, CPO maps covered areas of 4 to 13 cm<sup>2</sup> with a grid step of 15 or 35 µm, depending on olivine minimum grain size. Because of the large size of olivine porphyroclasts in most samples, CPO were measured on several thin sections and then combined. Higher-resolution CPO maps (grid step 0.5 to 10 µm depending on the dominant grain size) of fine-grained zones were also obtained for 7 samples using the CamScan Crystal Probe X500-FEG SEM, also at the Geosciences Montpellier EBSD facility. Post-acquisition treatment consisted in deleting wild spikes and filling non-indexed pixels with ≥ 6 neighbors with coherent orientations with their average orientation. </p> <p>In situ major element concentrations of amphiboles were measured using a Cameca SX-100 electron microprobe (CAMPARIS service, Paris). The accelerating voltage was fixed at 15 kV and beam current at 10 nA. The spot size was 1μm. Counting times were 10 s. Compositions are presented in TableS3.</p>
Doodleverse/Segmentation Zoo Res-UNet models for 4-class (water, whitewater, sediment and other) segmentation of Sentinel-2 and Landsat-7/8 5-band (RGB+NIR+SWIR) images of coasts.
<p>These Residual-UNet model data are based on 5-band RGB+NIR+SWIR (red, green, blue, near-infrared, and short-wave infrared) images of coasts and associated labels.</p> <p> </p> <p>Models have been created using Segmentation Gym* using the following dataset**: <a href="https://doi.org/10.5281/zenodo.7344571">https://doi.org/10.5281/zenodo.7344571 </a></p> <p>Classes: {0=water, 1=whitewater, 2=sediment, 3=other}</p> <p><strong>File descriptions</strong></p> <p>For each model, there are 5 files with the same root name:</p> <p>1. <strong>'.json' </strong>config file: this is the file that was used by Segmentation Gym* to create the weights file. It contains instructions for how to make the model and the data it used, as well as instructions for how to use the model for prediction. It is a handy wee thing and mastering it means mastering the entire Doodleverse.</p> <p>2.<strong> '.h5'</strong> weights file: this is the file that was created by the Segmentation Gym* function `train_model.py`. It contains the trained model's parameter weights. It can called by the Segmentation Gym* function `seg_images_in_folder.py`. Models may be ensembled.</p> <p>3.<strong> '_modelcard.json'</strong> model card file: this is a json file containing fields that collectively describe the model origins, training choices, and dataset that the model is based upon. There is some redundancy between this file and the `config` file (described above) that contains the instructions for the model training and implementation. The model card file is not used by the program but is important metadata so it is important to keep with the other files that collectively make the model and is such is considered part of the model</p> <p>4. <strong> '_model_history.npz'</strong> model training history file: this numpy archive file contains numpy arrays describing the training and validation losses and metrics. It is created by the Segmentation Gym function `train_model.py`</p> <p>5. <strong> '.png'</strong> model training loss and mean IoU plot: this png file contains plots of training and validation losses and mean IoU scores during model training. A subset of data inside the .npz file. It is created by the Segmentation Gym function `train_model.py`</p> <p>Additionally, BEST_MODEL.txt contains the name of the model with the best validation loss and mean IoU</p> <p> </p> <p><strong>References</strong></p> <p>*Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. <a href="https://doi.org/10.1029/2022EA002332">https://doi.org/10.1029/2022EA002332</a> See: <a href="https://github.com/Doodleverse/segmentation_gym">https://github.com/Doodleverse/segmentation_gym</a></p> <p>** Buscombe, Daniel. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. <a href="https://doi.org/10.5281/zenodo.7344571">https://doi.org/10.5281/zenodo.7344571</a></p>
Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other)
<p><em><strong>Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other)</strong></em></p> <p><strong>Description</strong></p> <p>579 images and 579 associated labels for semantic segmentation of Sentinel-2 and Landsat RGB satellite images of coasts. The 4 classes are 0=water, 1=whitewater, 2=sediment, 3=other</p> <p>These images and labels have been made using the Doodleverse software package, Doodler*. These images and labels could be used within numerous Machine Learning frameworks for image segmentation, but have specifically been made for use with the Doodleverse software package, Segmentation Gym**.</p> <p>Some (422) of these images and labels were originally included in the Coast Train*** data release, and have been modified from their original by reclassifying from the original classes to the present 4 classes.</p> <p>The label images are a subset of the following data release**** <a href="https://doi.org/10.5281/zenodo.7335647">https://doi.org/10.5281/zenodo.7335647</a></p> <p>Imagery comes from the following 10 sand beach sites:</p> <ol> <li>Duck, NC, Hatteras NC, USA</li> <li>Santa Cruz CA, USA</li> <li>Galveston TX, USA</li> <li>Truc Vert,France</li> <li>Sunset State Beach CA, USA</li> <li>Torrey Pines CA, USA</li> <li>Narrabeen, NSW, Australia</li> <li>Elwha WA, USA</li> <li>Ventura region, CA, USA</li> <li>Klamath region, CA USA</li> </ol> <p>Imagery are a mixture of 10-m Sentinel-2 and 15-m pansharpened Landsat 7, 8, and 9 visible-band imagery of various sizes. Red, Green, Blue, NIR, and SWIR bands only</p> <p><strong>File descriptions</strong></p> <ol> <li>classes.txt, a file containing the class names</li> <li>images.zip, a zipped folder containing the 3-band RGB images of varying sizes and extents</li> <li>nir.zip, a zipped folder containing the corresponding near-infrared (NIR) imagery</li> <li>swir.zip, a zipped folder containing the corresponding shortwave-infrared (SWIR) imagery</li> <li>labels.zip, a zipped folder containing the 1-band label images</li> <li>overlays.zip, a zipped folder containing a semi-transparent overlay of the color-coded label on the image (blue=0=water, red=1=whitewater, yellow=2=sediment, green=3=other)</li> <li>resized_images.zip, RGB images resized to 512x512x3 pixels</li> <li>resized_nir.zip, NIR images resized to 512x512x3 pixels</li> <li>resized_swir.zip, SWIR images resized to 512x512x3 pixels</li> <li>resized_labels.zip, label images resized to 512x512 pixels</li> </ol> <p><strong>References</strong></p> <p>*Doodler: Buscombe, D., Goldstein, E.B., Sherwood, C.R., Bodine, C., Brown, J.A., Favela, J., Fitzpatrick, S., Kranenburg, C.J., Over, J.R., Ritchie, A.C. and Warrick, J.A., 2021. Human‐in‐the‐Loop Segmentation of Earth Surface Imagery. Earth and Space Science, p.e2021EA002085<a href="https://doi.org/10.1029/2021EA002085">https://doi.org/10.1029/2021EA002085</a>. See <a href="https://github.com/Doodleverse/dash_doodler">https://github.com/Doodleverse/dash_doodler.</a></p> <p>**Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. <a href="https://doi.org/10.1029/2022EA002332">https://doi.org/10.1029/2022EA002332</a> See: <a href="https://github.com/Doodleverse/segmentation_gym">https://github.com/Doodleverse/segmentation_gym</a></p> <p>***Coast Train data release: Wernette, P.A., Buscombe, D.D., Favela, J., Fitzpatrick, S., and Goldstein E., 2022, Coast Train--Labeled imagery for training and evaluation of data-driven models for image segmentation: U.S. Geological Survey data release, <a href="https://doi.org/10.5066/P91NP87I">https://doi.org/10.5066/P91NP87I</a>. See <a href="https://coasttrain.github.io/CoastTrain/">https://coasttrain.github.io/CoastTrain/ </a>for more information</p> <p>**** Buscombe, Daniel, Goldstein, Evan, Bernier, Julie, Bosse, Stephen, Colacicco, Rosa, Corak, Nick, Fitzpatrick, Sharon, del Jesús González Guillén, Anais, Ku, Venus, Paprocki, Julie, Platt, Lindsay, Steele, Bethel, Wright, Kyle, & Yasin, Brandon. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. <a href="https://doi.org/10.5281/zenodo.7335647">https://doi.org/10.5281/zenodo.7335647</a></p>
June 2023 Supplement Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other)
<p><strong>June 2023 Supplement of Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other)</strong></p> <p><strong>Description</strong></p> <p>Supplementary dataset to:</p> <p>Buscombe, Daniel, Goldstein, Evan, Bernier, Julie, Bosse, Stephen, Colacicco, Rosa, Corak, Nick, Fitzpatrick, Sharon, del Jesús González Guillén, Anais, Ku, Venus, Paprocki, Julie, Platt, Lindsay, Steele, Bethel, Wright, Kyle, & Yasin, Brandon. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7335647</p> <p>This supplemental dataset consists of 283 RGB images and 283 associated labels for semantic segmentation of Sentinel-2 and Landsat RGB satellite images of coasts. Of these, 77 images-label pairs also have a corresponding NIR and SWIR satellite image. The 4 classes are 0=water, 1=whitewater, 2=sediment, 3=other</p> <p>These images and labels have been made using the Doodleverse software package, Doodler*. These images and labels could be used within numerous Machine Learning frameworks for image segmentation, but have specifically been made for use with the Doodleverse software package, Segmentation Gym**.</p> <p>Imagery are a mixture of 10-m Sentinel-2 and 15-m pansharpened Landsat 7, 8, and 9 visible-band imagery of various sizes. NIR, SWIR, Red, Green, and Blue bands only</p> <p><strong>File descriptions</strong></p> <ol> <li>classes.txt, a file containing the class names</li> <li>images.zip, a zipped folder containing the 3-band images of varying sizes and extents</li> <li>labels.zip, a zipped folder containing the 1-band label images</li> <li>overlays.zip, a zipped folder containing a semi-transparent overlay of the color-coded label on the image (blue=0=water, red=1=whitewater, yellow=2=sediment, green=3=other)</li> <li>nir.zip</li> <li>swir.zip</li> </ol> <p><strong>References</strong></p> <p>Buscombe, Daniel, Goldstein, Evan, Bernier, Julie, Bosse, Stephen, Colacicco, Rosa, Corak, Nick, Fitzpatrick, Sharon, del Jesús González Guillén, Anais, Ku, Venus, Paprocki, Julie, Platt, Lindsay, Steele, Bethel, Wright, Kyle, & Yasin, Brandon. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7335647</p> <p>*Doodler: Buscombe, D., Goldstein, E.B., Sherwood, C.R., Bodine, C., Brown, J.A., Favela, J., Fitzpatrick, S., Kranenburg, C.J., Over, J.R., Ritchie, A.C. and Warrick, J.A., 2021. Human‐in‐the‐Loop Segmentation of Earth Surface Imagery. Earth and Space Science, p.e2021EA002085<a href="https://doi.org/10.1029/2021EA002085">https://doi.org/10.1029/2021EA002085</a>. See <a href="https://github.com/Doodleverse/dash_doodler">https://github.com/Doodleverse/dash_doodler.</a></p> <p>**Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. <a href="https://doi.org/10.1029/2022EA002332">https://doi.org/10.1029/2022EA002332</a> See: <a href="https://github.com/Doodleverse/segmentation_gym">https://github.com/Doodleverse/segmentation_gym</a></p> <p> </p>
Epipremnum aureum VIS-SWIR Hyperspectral Image from HYPERIA
<p>The spectral image show two Epipremnum aureum leaves measured in the visible and short wave infrared (400-1700 nm) using the HERAVISSWIR device developed during the HYPERIA project. The leaf on the right is healty while the leaf on the left has evident stress signatures. The image was recorded from a 1m distance using a combination of a LED and halogen lamps to cover the full spectral range. </p>
Doodleverse/Segmentation Zoo Res-UNet models for 4-class (water, whitewater, sediment and other) segmentation of Sentinel-2 and Landsat-7/8 7-band (RGB+NIR+SWIR+NDWI+MNDWI) images of coasts.
<p>Doodleverse/Segmentation Zoo Res-UNet models for 4-class (water, whitewater, sediment and other) segmentation of Sentinel-2 and Landsat-7/8 7-band (RGB+NIR+SWIR+NDWI+MNDWI) images of coasts.</p> <p>Models have been created using Segmentation Gym* using the following dataset**: https://doi.org/10.5281/zenodo.7344571</p> <p>Classes: {0=water, 1=whitewater, 2=sediment, 3=other}</p> <p>File descriptions</p> <p>For each model, there are 5 files with the same root name:</p> <p>1. '.json' config file: this is the file that was used by Segmentation Gym* to create the weights file. It contains instructions for how to make the model and the data it used, as well as instructions for how to use the model for prediction. It is a handy wee thing and mastering it means mastering the entire Doodleverse.</p> <p>2. '.h5' weights file: this is the file that was created by the Segmentation Gym* function `train_model.py`. It contains the trained model's parameter weights. It can called by the Segmentation Gym* function `seg_images_in_folder.py`. Models may be ensembled.</p> <p>3. '_modelcard.json' model card file: this is a json file containing fields that collectively describe the model origins, training choices, and dataset that the model is based upon. There is some redundancy between this file and the `config` file (described above) that contains the instructions for the model training and implementation. The model card file is not used by the program but is important metadata so it is important to keep with the other files that collectively make the model and is such is considered part of the model</p> <p>4. '_model_history.npz' model training history file: this numpy archive file contains numpy arrays describing the training and validation losses and metrics. It is created by the Segmentation Gym function `train_model.py`</p> <p>5. '.png' model training loss and mean IoU plot: this png file contains plots of training and validation losses and mean IoU scores during model training. A subset of data inside the .npz file. It is created by the Segmentation Gym function `train_model.py`</p> <p>Additionally, BEST_MODEL.txt contains the name of the model with the best validation loss and mean IoU</p> <p><br> References</p> <p>*Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. https://doi.org/10.1029/2022EA002332 See: https://github.com/Doodleverse/segmentation_gym</p> <p>** Buscombe, Daniel. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7344571</p> <p> </p>
Leads without swirly cloud
<p>Same as other link but the big set of pixels in the top left are removed. </p>
Images and 2-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, other)
<p><em><strong>Images and 2-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, other)</strong></em></p> <p>Images and 2-class labels for semantic segmentation of Sentinel-2 and Landsat 5-band (R+G+B+NIR+SWIR) satellite images of coasts (water, other)</p> <p><strong>Description</strong></p> <p>3649 images and 3649 associated labels for semantic segmentation of Sentinel-2 and Landsat 5-band (R+G+B+NIR+SWIR) satellite images of coasts. The 2 classes are 1=water, 0=other. Imagery are a mixture of 10-m Sentinel-2 and 15-m pansharpened Landsat 7, 8, and 9 visible-band imagery of various sizes. Red, Green, Blue, near-infrared, and short-wave infrared bands only</p> <p>These images and labels could be used within numerous Machine Learning frameworks for image segmentation, but have specifically been made for use with the Doodleverse software package, Segmentation Gym**.</p> <p>Two data sources have been combined</p> <p><strong>Dataset 1</strong></p> <p>* 579 image-label pairs from the following data release**** https://doi.org/10.5281/zenodo.7344571<br> * Labels have been reclassified from 4 classes to 2 classes.<br> * Some (422) of these images and labels were originally included in the Coast Train*** data release, and have been modified from their original by reclassifying from the original classes to the present 2 classes.<br> * These images and labels have been made using the Doodleverse software package, Doodler*.</p> <p><strong>Dataset 2</strong></p> <ul> <li>3070 image-label pairs from the Sentinel-2 Water Edges Dataset (SWED)***** dataset, https://openmldata.ukho.gov.uk/, described by Seale et al. (2022)******</li> <li>A subset of the original SWED imagery (256 x 256 x 12) and labels (256 x 256 x 1) have been chosen, based on the criteria of more than 2.5% of the pixels represent water</li> </ul> <p><strong>File descriptions</strong></p> <ul> <li> classes.txt, a file containing the class names</li> <li> images.zip, a zipped folder containing the 3-band RGB images of varying sizes and extents</li> <li> labels.zip, a zipped folder containing the 1-band label images</li> <li> nir.zip, a zipped folder containing the 1-band near-infrared (NIR) images</li> <li> swir.zip, a zipped folder containing the 1-band shorttwave infrared (SWIR) images</li> <li> overlays.zip, a zipped folder containing a semi-transparent overlay of the color-coded label on the image (red=1=water, blue=0=other)</li> <li> resized_images.zip, RGB images resized to 512x512x3 pixels</li> <li> resized_labels.zip, label images resized to 512x512x1 pixels</li> <li> resized_nir.zip, NIR images resized to 512x512x1 pixels</li> <li> resized_swir.zip, SWIR images resized to 512x512x1 pixels</li> </ul> <p>References</p> <p>*Doodler: Buscombe, D., Goldstein, E.B., Sherwood, C.R., Bodine, C., Brown, J.A., Favela, J., Fitzpatrick, S., Kranenburg, C.J., Over, J.R., Ritchie, A.C. and Warrick, J.A., 2021. Human‐in‐the‐Loop Segmentation of Earth Surface Imagery. Earth and Space Science, p.e2021EA002085https://doi.org/10.1029/2021EA002085. See https://github.com/Doodleverse/dash_doodler.</p> <p>**Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. https://doi.org/10.1029/2022EA002332 See: https://github.com/Doodleverse/segmentation_gym</p> <p>***Coast Train data release: Wernette, P.A., Buscombe, D.D., Favela, J., Fitzpatrick, S., and Goldstein E., 2022, Coast Train--Labeled imagery for training and evaluation of data-driven models for image segmentation: U.S. Geological Survey data release, https://doi.org/10.5066/P91NP87I. See https://coasttrain.github.io/CoastTrain/ for more information</p> <p>****Buscombe, Daniel. (2022). Images and 4-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, whitewater, sediment, other) (v1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7344571</p> <p>*****Seale, C., Redfern, T., Chatfield, P. 2022. Sentinel-2 Water Edges Dataset (SWED) https://openmldata.ukho.gov.uk/</p> <p>******Seale, C., Redfern, T., Chatfield, P., Luo, C. and Dempsey, K., 2022. Coastline detection in satellite imagery: A deep learning approach on new benchmark data. Remote Sensing of Environment, 278, p.113044.</p>
Doodleverse/Segmentation Zoo Res-UNet models for 2-class (water, other) segmentation of Sentinel-2 and Landsat-7/8 5-band (RGB+NIR+SWIR) images of coasts.
<p><em><strong>Doodleverse/Segmentation Zoo Res-UNet models for 2-class (water, other) segmentation of Sentinel-2 and Landsat-7/8 5-band (RGB+NIR+SWIR) images of coasts.</strong></em></p> <p>These Residual-UNet model data are based on RGB+NIR+SWIR (red, green, blue, near infrared and shortwave infrared) images of coasts and associated labels.</p> <p>Models have been created using Segmentation Gym* using the following dataset**: <a href="https://doi.org/10.5281/zenodo.7384263">https://doi.org/10.5281/zenodo.7384263</a></p> <p>Classes: {0=other, 1=water}</p> <p><strong>File descriptions</strong></p> <p>For each model, there are 5 files with the same root name:</p> <p>1. <strong>'.json' </strong>config file: this is the file that was used by Segmentation Gym* to create the weights file. It contains instructions for how to make the model and the data it used, as well as instructions for how to use the model for prediction. It is a handy wee thing and mastering it means mastering the entire Doodleverse.</p> <p>2.<strong> '.h5'</strong> weights file: this is the file that was created by the Segmentation Gym* function `train_model.py`. It contains the trained model's parameter weights. It can called by the Segmentation Gym* function `seg_images_in_folder.py`. Models may be ensembled.</p> <p>3.<strong> '_modelcard.json'</strong> model card file: this is a json file containing fields that collectively describe the model origins, training choices, and dataset that the model is based upon. There is some redundancy between this file and the `config` file (described above) that contains the instructions for the model training and implementation. The model card file is not used by the program but is important metadata so it is important to keep with the other files that collectively make the model and is such is considered part of the model</p> <p>4. <strong> '_model_history.npz'</strong> model training history file: this numpy archive file contains numpy arrays describing the training and validation losses and metrics. It is created by the Segmentation Gym function `train_model.py`</p> <p>5. <strong> '.png'</strong> model training loss and mean IoU plot: this png file contains plots of training and validation losses and mean IoU scores during model training. A subset of data inside the .npz file. It is created by the Segmentation Gym function `train_model.py`</p> <p>Additionally, BEST_MODEL.txt contains the name of the model with the best validation loss and mean IoU</p> <p> </p> <p><strong>References</strong></p> <p>*Segmentation Gym: Buscombe, D., & Goldstein, E. B. (2022). A reproducible and reusable pipeline for segmentation of geoscientific imagery. Earth and Space Science, 9, e2022EA002332. <a href="https://doi.org/10.1029/2022EA002332">https://doi.org/10.1029/2022EA002332</a> See: <a href="https://github.com/Doodleverse/segmentation_gym">https://github.com/Doodleverse/segmentation_gym</a></p> <p>** Buscombe, Daniel. (2022). Images and 2-class labels for semantic segmentation of Sentinel-2 and Landsat RGB, NIR, and SWIR satellite images of coasts (water, other) (v1.0) [Data set]. Zenodo. <a href="https://doi.org/10.5281/zenodo.7384263">https://doi.org/10.5281/zenodo.7384263</a></p>
SWIR Otoscopy Study
ClinicalTrials.gov study NCT06944795. IPD Sharing: NO. Countries: 1. Publications: 6.
SWIR Camera in Walnut site 120 meters
Open the record for dataset details and reuse information.
ASTER L2 Surface Radiance VNIR and SWIR V004
The Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Surface Radiance VNIR and SWIR (AST_09) contains atmospherically corrected data for the Visible and Near Infrared (VNIR) and Shortwave Infrared (SWIR) sensors. Both the VNIR and SWIR data are atmospherically corrected and are generated using the bands of the corresponding ASTER [Level 1B](https://doi.org/10.5067/ASTER/AST_L1B.004) image.The AST_09 product has a spatial resolution of 15 meters (m) for the VNIR bands and 30 m for the SWIR bands.Known Issues* Level 2 products that are on the international date line/anti-meridian have incorrect bounding coordinates for the UTM zone defined in the file metadata.* SWIR data acquired after April 2008 may exhibit anomalous saturation and striping. Users should consult the ASTER SWIR User Advisory for additional details.Improvements/Changes from Previous Versions* Enhanced Atmospheric Correction: Version 4 uses Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) data as the primary source for atmospheric parameters (ozone, water vapor, pressure, and temperature), improving the precision of emissivity calculations. Fallback Mechanisms: When MERRA-2 data are unavailable, the product employs Global Data Assimilation System (GDAS) data as a backup, with climatology data serving as a final fallback to ensure continuous processing. Radiometric Calibration Update: Version 4 applies Radiometric Calibration Coefficient Version 5 (RCC V5) to improve the radiometric accuracy of the raw DNs, based on research by [Tsuchida and others (2020)](https://doi.org/10.3390/rs12030427), published in Remote Sensing.
ASTER L2 Surface Radiance VNIR and SWIR V003
The Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Surface Radiance VNIR and SWIR (AST_09) is a multi-file product that contains atmospherically corrected data for both the Visible and Near Infrared (VNIR) and Shortwave Infrared (SWIR) sensors. The AST_09 product has a spatial resolution of 15 meters (m) for the VNIR bands and 30 m for the SWIR bands. Each product delivery includes two Hierarchical Data Format - Earth Observing System (HDF-EOS) files: one for the VNIR, and the other for the SWIR. They are distinguished from one another by a one-second difference in the production time that appears as part of the file name. The more obvious distinguishing feature is the file size; the VNIR file is always the larger of the two. Both the VNIR and SWIR data are atmospherically corrected and are generated using the bands of the corresponding [ASTER Level 1B](https://doi.org/10.5067/ASTER/AST_L1B.003) image.The ASTER L2 Surface Radiance VNIR and SWIR data product is only available through [NASA's Earthdata Search](https://search.earthdata.nasa.gov/search?q=C1299783574-LPDAAC_ECS). The ASTER Order Instructions provide step-by-step directions for ordering this product.Known Issues* Data Anomalies: Users are advised that ASTER SWIR data acquired from April 2008 to the present exhibit anomalous saturation of values and anomalous striping. This effect is also present for some prior acquisition periods. Please refer to the ASTER SWIR User Advisory for more details.* Data acquisition gaps: On November 28, 2024, one of Terra's power-transmitting shunt units failed. As a result, there was insufficient power to maintain functionality of the ASTER instrument. ASTER resumed acquisitions for the VNIR bands on January 18, 2025, and for the TIR bands on April 15, 2025. Users should note the data gap in ASTER acquisitions from November 28, 2024, through January 16, 2025, for VNIR observations, and a gap from November 28, 2024, through April 15, 2025, for TIR acquisitions.Improvements/Changes from Previous Version* The Science Scalable Scripts-based Science Processor for Missions (S4PM) Version 3.4 algorithm, which is used to generate L2 Product Generation Executables (PGEs), is relying on a new ancillary input for atmospheric parameters. Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) is global atmospheric reanalysis that combines remote sensing observations and interactions with the climate system. It will be one of the primary ozone and water vapor, pressure, and temperature inputs for L2 PGEs. MERRA-2 will provide a finer geographic resolution grid since it is a 3-dimensional, 3-hourly data collection with 50-km (latitudinal direction) spatial resolution.* The fallback options for L2 PGEs are as follows: * Ozone: [TOVS Ozone (OZ_DLY ) > AURA Ozone Monitoring Instrument (AURAOMI) > Total Ozone Analysis from Stratospheric and Tropospheric (TOAST) > Earth Probe-Total Ozone Mapping Spectrometer (EPTOMS)] or [MERRA-2] > National Centers for Environmental Prediction (NCEP)/Global Data Assimilation System (GDAS) > Climatology * Water Vapor, Pressure, and Temperature: [MOD07_L2] or [MERRA-2] > NCEP/GDAS > Climatology* Caveat: The temporal range for MERRA-2 covers 1980 to present; however, there is latency of ~3 weeks after the end of a month. Hence, NCEP/GDAS > Climatology fallback sequence will be applied for on-demand requests that fall outside of MERRA-2's temporal range or if the data is not science grade.* Starting June 23, 2021, radiometric calibration coefficient Version 5 (RCC V5) will be applied to newly observed ASTER data and archived ASTER data products. Details regarding RCC V5 are described in the following journal article. * Tsuchida, S., Yamamoto, H., Kouyama, T., Obata, K., Sakuma, F., Tachikawa, T., Kamei, A., Arai, K., Czapla-Myers, J.S., Biggar, S.F., and Thome, K.J., 2020, Radiometric Degradation Curves for the ASTER VNIR Processing Using Vicarious and Lunar Calibrations: Remote Sensing, v. 12, no. 3, at https://doi.org/10.3390/rs12030427.* As of December 15, 2021, the LP DAAC has implemented changes to ASTER PGE Version 3.4, which will affect all ASTER Level 2 on-demand products. Changes include: * Aura Ozone Monitoring Instrument (OMI) has been added as one of the ancillary ozone inputs for any observations made after May 27, 2020. The sequence of fallbacks for ozone will remain the same. * Toolkit has been updated from Version 5.2.17 to 5.2.20. Users may notice minor differences between the two versions. Differences may include minuscule changes in digital numbers around the peripheral of the granule and boundaries of a cloud for Surface Reflectance and Surface Radiance (AST07 and AST09) QA Data Plane depending on the Operating System and libraries being used by the user to process the data.* Additionally, Climatology, which is one of the inputs for Ozone and Moisture, Temperature and Pressures (MTP) will be removed from
ASTER L2 Surface Reflectance VNIR and Crosstalk Corrected SWIR V004
The Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Surface Reflectance VNIR and Crosstalk Corrected SWIR (AST_07XT) dataset contains measures of the fraction of incoming solar radiation reflected from the Earth’s surface to the ASTER instrument corrected for atmospheric effects and viewing geometry for both the Visible and Near Infrared (VNIR) and Shortwave Infrared (SWIR) sensors. Both the VNIR and SWIR data are atmospherically corrected and are generated using the bands of the corresponding ASTER [L1B](https://doi.org/10.5067/ASTER/AST_L1B.004) image. The AST_07XT product has a spatial resolution of 15 meters (m) for the VNIR bands and 30 m for the SWIR bands.Known Issues* Level 2 products that are on the international date line/anti-meridian have incorrect bounding coordinates for the UTM zone defined in the file metadata.* SWIR data acquired after April 2008 may exhibit anomalous saturation and striping. Users should consult the ASTER SWIR User Advisory for additional details.Improvements/Changes from Previous Versions* SWIR Crosstalk Correction: Applies a correction to reduce stray light effects in the SWIR bands, enhancing data quality by minimizing artifacts. Enhanced Atmospheric Correction: Version 4 uses Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) data as the primary source for atmospheric parameters (ozone, water vapor, pressure, and temperature), improving the precision of emissivity calculations. Fallback Mechanisms: When MERRA-2 data are unavailable, the product employs Global Data Assimilation System (GDAS) data as a backup, with climatology data serving as a final fallback to ensure continuous processing. Radiometric Calibration Update: Version 4 applies Radiometric Calibration Coefficient Version 5 (RCC V5) to improve the radiometric accuracy of the raw DNs, based on research by [Tsuchida and others (2020)](https://doi.org/10.3390/rs12030427), published in Remote Sensing.
ASTER L2 Surface Radiance VNIR and Crosstalk Corrected SWIR V004
The Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Surface Radiance VNIR and Crosstalk Corrected SWIR (AST_09XT) contains atmospherically corrected data for the Visible and Near Infrared (VNIR) and Shortwave Infrared (SWIR) sensors. The AST_09XT product has a spatial resolution of 15 meters (m) for the VNIR bands and 30 m for the SWIR bands. Both the VNIR and the SWIR data are atmospherically corrected using the corresponding bands from an ASTER [Level 1B](https://doi.org/10.5067/ASTER/AST_L1B.004) image.Known Issues* Level 2 products that are on the international date line/anti-meridian have incorrect bounding coordinates for the UTM zone defined in the file metadata.* SWIR data acquired after April 2008 may exhibit anomalous saturation and striping. Users should consult the ASTER SWIR User Advisory for additional details.Improvements/Changes from Previous Versions* SWIR Crosstalk Correction: Applies a correction to reduce stray light effects in the SWIR bands, enhancing data quality by minimizing artifacts. Enhanced Atmospheric Correction: Version 4 uses Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) data as the primary source for atmospheric parameters (ozone, water vapor, pressure, and temperature), improving the precision of emissivity calculations. Fallback Mechanisms: When MERRA-2 data are unavailable, the product employs Global Data Assimilation System (GDAS) data as a backup, with climatology data serving as a final fallback to ensure continuous processing. Radiometric Calibration Update: Version 4 applies Radiometric Calibration Coefficient Version 5 (RCC V5) to improve the radiometric accuracy of the raw DNs, based on research by [Tsuchida and others (2020)](https://doi.org/10.3390/rs12030427), published in Remote Sensing.
Sentinel-5P TROPOMI Irradiance product SWIR module L1B V2 (S5P_L1B_IR_SIR) at GES DISC
The Copernicus Sentinel-5 Precursor (Sentinel-5P or S5P) satellite mission is one of the European Space Agency's (ESA) new mission family - Sentinels, and it is a joint initiative between the Kingdom of the Netherlands and the ESA. The sole payload on Sentinel-5P is the TROPOspheric Monitoring Instrument (TROPOMI), which is a nadir-viewing 108 degree Field-of-View push-broom grating hyperspectral spectrometer, covering the wavelength of ultraviolet-visible (UV-VIS, 270nm to 495nm), near infrared (NIR, 675nm to 775nm), and shortwave infrared (SWIR, 2305nm-2385nm).TROPOMI Level-1B (L1B) product is generated by the Koninklijk Nederlands Meteoroligisch Instituut (KNMI) TROPOMI L01B processor from Level-0 input data and auxiliary data products with the netCDF-4 enhanced model. It provides users with radiance, irradiance, calibration and engineering products.
Sentinel-5P TROPOMI SNPP cloud product band 7 (SWIR detector) 1-Orbit L2 5.5km x 7km V1 (S5P_L2__NP_BD7_HiR) at GES DISC
Starting from August 6th in 2019, Sentinel-5P TROPOMI along-track high spatial resolution (~5.5km at nadir) has been implemented.For data before August 6th of 2019, please check S5P_L2__NP_BD7_1 data collection.The Copernicus Sentinel-5 Precursor (Sentinel-5P or S5P) satellite mission is one of the European Space Agency's (ESA) new mission family - Sentinels, and it is a joint initiative between the Kingdom of the Netherlands and the ESA. The sole payload on Sentinel-5P is the TROPOspheric Monitoring Instrument (TROPOMI), which is a nadir-viewing 108 degree Field-of-View push-broom grating hyperspectral spectrometer, covering the wavelength of ultraviolet-visible (UV-VIS, 270nm to 495nm), near infrared (NIR, 675nm to 775nm), and shortwave infrared (SWIR, 2305nm-2385nm). Sentinel-5P is the first of the Atmospheric Composition Sentinels and is expected to provide measurements of ozone, NO2, SO2, CH4, CO, formaldehyde, aerosols and cloud at high spatial, temporal and spectral resolutions.Copernicus Sentinel-5P is flying in a loose formation with U.S. Suomi National Polar-orbiting Partnership (SNPP) so that S5P is able to utilize the high spatial resolution capability of the Visible Infrared Imager Radiometer Suite (VIIRS) instrument. S5P_L2_NP_BDx product contains VIIRS cloud information for each S5P across-track observation in a given band (i.e. band 3, band 6 and band 7). In addition to the nominal filed-of-view (FOV), the S5P_NPPC products are also generated for three scaled FOVs both in along and across-track directions to account for the presence of cloud covering a more extended area than the nominal FOV. The main output of S5P_L2_NP_BDx are the number of VIIRS pixels classified as confidently cloudy, probably cloudy, probably clear, and confidently clear; and the VIIRS sun-normalized radiance information in band M7, M9, and M11 such as mean, standard deviation, as well as number of valid radiance contributions.
ASTER L2 Surface Reflectance VNIR and SWIR V004
The Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Surface Reflectance VNIR and SWIR (AST_07) data product contains measures of the fraction of incoming solar radiation reflected from the Earth’s surface to the ASTER instrument corrected for atmospheric effects and viewing geometry for both the Visible and Near Infrared (VNIR) and Shortwave Infrared (SWIR) sensors. The AST_07 product has a spatial resolution of 15 meters (m) for the VNIR bands and 30 m for the SWIR bands.Known Issues* Level 2 products that are on the international date line/anti-meridian have incorrect bounding coordinates for the Universal Transverse Mercator (UTM) zone defined in the file metadata.* SWIR data acquired after April 2008 may exhibit anomalous saturation and striping. Users should consult the ASTER SWIR User Advisory for additional details.Improvements/Changes from Previous Versions* Enhanced Atmospheric Correction: Version 4 uses Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) data as the primary source for atmospheric parameters (ozone, water vapor, pressure, and temperature), improving the precision of emissivity calculations. Fallback Mechanisms: When MERRA-2 data are unavailable, the product employs Global Data Assimilation System (GDAS) data as a backup, with climatology data serving as a final fallback to ensure continuous processing. Radiometric Calibration Update: Version 4 applies Radiometric Calibration Coefficient Version 5 (RCC V5) to improve the radiometric accuracy of the raw DNs, based on research by [Tsuchida and others (2020)](https://doi.org/10.3390/rs12030427), published in Remote Sensing.
Sentinel-5P TROPOMI SNPP cloud product band 7 (SWIR detector) 1-Orbit L2 5.5km x 7km V2 (S5P_L2__NP_BD7_HiR) at GES DISC
Starting from August 6th in 2019, Sentinel-5P TROPOMI along-track high spatial resolution (~5.5km at nadir) has been implemented.For data before August 6th of 2019, please check S5P_L2__NP_BD7_1 data collection.The Copernicus Sentinel-5 Precursor (Sentinel-5P or S5P) satellite mission is one of the European Space Agency's (ESA) new mission family - Sentinels, and it is a joint initiative between the Kingdom of the Netherlands and the ESA. The sole payload on Sentinel-5P is the TROPOspheric Monitoring Instrument (TROPOMI), which is a nadir-viewing 108 degree Field-of-View push-broom grating hyperspectral spectrometer, covering the wavelength of ultraviolet-visible (UV-VIS, 270nm to 495nm), near infrared (NIR, 675nm to 775nm), and shortwave infrared (SWIR, 2305nm-2385nm). Sentinel-5P is the first of the Atmospheric Composition Sentinels and is expected to provide measurements of ozone, NO2, SO2, CH4, CO, formaldehyde, aerosols and cloud at high spatial, temporal and spectral resolutions.Copernicus Sentinel-5P is flying in a loose formation with U.S. Suomi National Polar-orbiting Partnership (SNPP) so that S5P is able to utilize the high spatial resolution capability of the Visible Infrared Imager Radiometer Suite (VIIRS) instrument. S5P_L2_NP_BDx product contains VIIRS cloud information for each S5P across-track observation in a given band (i.e. band 3, band 6 and band 7). In addition to the nominal filed-of-view (FOV), the S5P_NPPC products are also generated for three scaled FOVs both in along and across-track directions to account for the presence of cloud covering a more extended area than the nominal FOV. The main output of S5P_L2_NP_BDx are the number of VIIRS pixels classified as confidently cloudy, probably cloudy, probably clear, and confidently clear; and the VIIRS sun-normalized radiance information in band M7, M9, and M11 such as mean, standard deviation, as well as number of valid radiance contributions.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.