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32 results for “Schmidtea mediterranea”
Island-specific evolution of a sex-primed autosome in the planarian Schmidtea mediterranea
<p>The sexual strain of the planarian <em>Schmidtea mediterranea </em>is a hermaphrodite indigenous to Tunisia and several Mediterranean islands. Here, we isolated individual chromosomes and used sequencing, Hi-C and linkage mapping to assemble a chromosome-scale genome reference. The linkage map revealed an extremely low rate of recombination on chromosome 1. We confirmed suppression of recombination on chromosome 1 by genotyping of individual sperm and oocytes. We showed that previously identified genomic regions that maintain heterozygosity even after prolonged inbreeding comprise essentially all of chromosome 1. Genome sequencing of individuals isolated in the wild indicated that this phenomenon has evolved specifically in populations from Sardinia and Corsica. We found that most known master regulators of the reproductive system are located on chromosome 1. We used RNA interference to knock down a gene with haplotype-biased expression and observed that this led to the formation of a more pronounced female mating organ. Based on these observations, we propose that chromosome 1 is a sex-primed autosome primed for evolution into a sex chromosome.</p>
Forsthofel-Lab/Identification of EV-responsive transcripts in the planarian Schmidtea mediterranea
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HOX gene complement and expression in the planarian Schmidtea mediterranea
GEO Series GSE78937. Schmidtea mediterranea. 6 samples. Type: Expression profiling by high throughput sequencing.
Cell type transcriptome atlas for the planarian Schmidtea mediterranea
GEO Series GSE111764. Mus musculus; Schmidtea mediterranea; Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.
Identification of rare, transient post-mitotic cell states that are induced by injury and required for whole-body regeneration in Schmidtea mediterranea
GEO Series GSE146685. Schmidtea mediterranea. 21 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional profiling of laser captured gonadal tissue from the planarian Schmidtea mediterranea
GEO Series GSE191229. Schmidtea mediterranea. 9 samples. Type: Expression profiling by high throughput sequencing.
RNA Seq analysis of Schmidtea mediterranea treated with RNAi against chd4, p53, or unc22 to identify factors involved in neoblast differentiation.
GEO Series GSE72389. Schmidtea mediterranea. 50 samples. Type: Expression profiling by high throughput sequencing.
Comparative transcriptomic analyses and single-cell RNA sequencing of the freshwater planarian Schmidtea mediterranea identifies major cell types and pathway conservation
GEO Series GSE115280. Schmidtea mediterranea. 1 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional profiling of Schmidtea mediterranea planarians (smed-runt-1 RNAi vs. control RNAi)
GEO Series GSE36869. Schmidtea mediterranea. 4 samples. Type: Expression profiling by array.
Expression analyses of nanos(RNAi) and control(RNAi) Schmidtea mediterranea
GEO Series GSE22797. Schmidtea mediterranea. 8 samples. Type: Expression profiling by array.
Metabolites produced by agat+ cells support regeneration in the planarian Schmidtea mediterranea
GEO Series GSE302094. Schmidtea mediterranea. 10 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of the head and tail of planarian Schmidtea mediterranea during nr4A inhibition
GEO Series GSE121046. Schmidtea mediterranea. 48 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional profiling of laser captured intestinal tissue from the planarian Schmidtea mediterranea
GEO Series GSE135351. Schmidtea mediterranea. 12 samples. Type: Expression profiling by high throughput sequencing.
Digital Gene Expression profiling of Schmidtea mediterranea stem cells.
GEO Series GSE51681. Schmidtea mediterranea. 3 samples. Type: Expression profiling by high throughput sequencing.
RNA Seq analysis of gene expression during Schmidtea mediterranea embryogenesis, including yolk and adult samples
GEO Series GSE82280. Schmidtea mediterranea. 40 samples. Type: Expression profiling by high throughput sequencing.
RNA Seq analysis of sorted Schmidtea mediterranea X1 and Xins cells to identify factors specific to neoblasts
GEO Series GSE73027. Schmidtea mediterranea. 8 samples. Type: Expression profiling by high throughput sequencing.
Identification of EV-responsive transcripts in the planarian Schmidtea mediterranea
GEO Series GSE261722. Schmidtea mediterranea. 24 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of single cells from the midline posterior extremity in planarian Schmidtea mediterranea
GEO Series GSE121047. Schmidtea mediterranea. 152 samples. Type: Expression profiling by high throughput sequencing.
Tnfaip2/Exoc3 driven lipid metabolism is essential for stem cell differentiation & organ homeostasis [Schmidtea mediterranea]
GEO Series GSE134300. Schmidtea mediterranea. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of pole-containing anterior tip regions in planarian Schmidtea mediterranea
GEO Series GSE121045. Schmidtea mediterranea. 12 samples. Type: Expression profiling by high throughput sequencing.
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