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Dataset results
42 results for “Sectioning method”
The dataset for publication "Characterization of scintillating materials in use for brachytherapy fiber based dosimeters" by S. Commeti, et al., Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2022.
<p>This dataset is related to paper journal paper with DOI: <a href="http://dx.doi.org/10.1016/j.nima.2022.167083">10.1016/j.nima.2022.167083</a>.</p> <p>The dataset contains raw txt file and matlab files on the transmittance and the attenuation of Gadox and YVO specimens. </p> <p>Data files were prepared by agnieszka.gierej@vub.be</p>
Three-dimensional arrangement of human bone marrow microvessels revealed by immunohistology in undecalcified sections - methods
<p>We reconstruct the 3D shape of microvasculature in human bone marrow specimen.</p> <ul> <li> Files "2016-07-01_Methodenvideo_....mp4" detail on the novel embedding process of our specimen. The video details on material preparation, special embedding device and devised procedure, the sectioning and further processes. For convinience, a high-resolution ....FullHD.mp4 and low-resolution .....SD.mp4 versions are provided.</li> <li>Files "2016-07-27 Manual Quality Control - ...mp4" details on the computer-based verification of final mesh and initial (registered) image stack. We can observe some blind ends or interrruptions in the reconstruction, this tools allows us to evaluate the suspective areas. There is a FullHD encode, and a SD version.</li> </ul>
Map. Species diversity of Diplopoda within the Sikhote-Alin State Nature Biosphere Reserve. The numbers of the natural landmarks (1–18) are explained in the "Material and Methods section" Карта. ВиΑовое разнообразие Αвупарноногих многоножек в Сихотэ-АΛинском заповеΑнике. Номера урочищ (1–18) поясняются в разΑеΛе «МатериаΛ и метоΑы» in Review of the millipedes of the Sikhote-Alin State Nature Biosphere Reserve (Far East of Russia), with detection of the morphological variability of Diplomaragna terricolor (Attems, 1899) (Diplopoda)
Map. Species diversity of Diplopoda within the Sikhote-Alin State Nature Biosphere Reserve. The numbers of the natural landmarks (1–18) are explained in the "Material and Methods section" Карта. ВиΑовое разнообразие Αвупарноногих многоножек в Сихотэ-АΛинском заповеΑнике. Номера урочищ (1–18) поясняются в разΑеΛе «МатериаΛ и метоΑы»
Sociodemographic predictors of bureaucratic violence in the residency application process: findings from a mixed methods cross-sectional survey of migrant women in Spain.
<p>Dataset contains the data used for the quantitative analyses presented in the paper titled "Sociodemographic predictors of bureaucratic violence in the residency application process: findings from a mixed methods cross-sectional survey of migrant women in Spain.".</p> <p>Data were collected from a cross-sectional online survey of migrant women living in the Valencian Community of Spain between January and March 2023. The dataset contains demographic information about participants, as well as the barriers that the reported facing in the process of applying for residency within Spain.</p>
SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections (Revision data)
<p>The submitted dataset, correspond to the RAW (*.czi format) and analysis files of the <strong>revisions</strong> of manuscript "SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections", which has been processed for revision (2020-01-31) by PLOS Biology.</p> <p>The files are in *.zip format and the naming follows thenumbering of the manuscript figures, which will be found in bioRxiv.org (<strong>ID#: BIORXIV/2020/938571</strong>). Each *.zip files contains a document with the description of all the provided files.</p>
Factors influencing the sustainability of homestead vegetable production intervention in Rufiji, Tanzania: A cross-sectional mixed methods study
<p><strong>Background </strong></p> <p>There is growing evidence that home vegetable gardening interventions improve food security and nutrition outcomes at the family level. This study assessed factors influencing the sustainability of homestead vegetable production intervention, one year after the cessation of external support.</p> <p><strong>Methods</strong></p> <p>This was a cross-sectional study using both quantitative and qualitative data collection methods. A total of 247 randomly selected households that participated in the homestead vegetable intervention were interviewed using a structured questionnaire. The study held four focus group discussions with households that participated in the intervention, and four In-Depth interviews with two extension workers, one community health worker, and one agriculture district officer. Multiple logistic regression for quantitative data and thematic analysis for qualitative data was conducted.</p> <p><strong>Results</strong></p> <p>About 20.24% (50/247) of households sustained homestead vegetable production for one year after the intervention phased out. Lack of seeds (adjusted OR=1.26: CI=0.39-0.89) and either manure or fertilizers (adjusted OR=1.69: CI =1.08-2.63) were significant factors influencing the sustainability of homesteads vegetable production. In the Focus Group discussions (FGDs) and In-Depth Interview (IDIs), all participating women and extension workers reported high cost of water, destruction from free-grazing animals, agriculture pests and diseases, poor soil fertility, shortage of seeds, and lack of capital affected homestead vegetable production sustainability.</p> <p><strong>Conclusion</strong></p> <p>Existing individual, community, and system challenges influence the sustainability of external-funded agriculture and nutrition interventions. The study findings underscore the importance of community authorities, scientists, and policymakers in having a well-thought sustainability plan in all promising external-funded interventions.</p>
Summary to Materials & Methods and Result Sections
<p>This repository contains summaries of the Materials & Methods and Results sections of my master’s thesis.</p>
Gastrointestinal Activation Post-elective CS (Cesarean Section) :A Comparison of Paula Method to Standard Care
ClinicalTrials.gov study NCT03761147. IPD Sharing: NO. Countries: 1. Publications: 1.
Factors influencing the sustainability of homestead vegetable production intervention in Rufiji, Tanzania: A cross-sectional mixed methods study
Open the record for dataset details and reuse information.
SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections
<p>The submitted dataset, correspond to the RAW (*.czi format) and analysis files of the manuscript "SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections", which has been processed for revision (2020-01-31) by PLOS Biology.</p> <p>The files are in *.zip format and the naming follows thenumbering of the manuscript figures, which will be found in bioRxiv.org (<strong>ID#: BIORXIV/2020/938571</strong>). Each *.zip files contains a document with the description of all the provided files.</p>
Nasopharyngeal swabs vs. saliva sampling for SARS-CoV-2 detection: A cross-sectional survey of acceptability for caregivers and children after experiencing both methods
<p><span>Background: </span><span>Saliva sampling is a promising alternative to nasopharyngeal swabs for SARS-CoV-2 testing, but acceptability data is lacking. We characterize the acceptability of saliva sampling and nasopharyngeal swabs for primary decision makers and their children after experiencing both testing modalities.</span></p> <p><span>Results: </span><span>48 participants and 48 primary decision makers completed the survey. Nasopharyngeal swab acceptability differed between scenarios, ranging 79% [95%CI: 66, 88] to 100% [95%CI: 95, 100]); saliva sampling acceptability was similar across scenarios, ranging 92% [95%CI: 82, 97]) to </span><span> </span><span>98% [95%CI: 89, 99]. 58% of youth described significant pain with nasopharyngeal swabbing, versus none with saliva sampling. 90% of children prefer saliva sampling. 66% of primary decision makers would prefer nasopharyngeal swabbing if it were 10% more sensitive.</span></p> <p><span>Conclusion: </span><span>Though youth prefer saliva sampling over nasopharyngeal swabs, primary decision makers present for testing remain highly accepting of both. Acceptance of nasopharyngeal swabs, however, varies with the testing indication and is influenced by perceived test accuracy. Understanding factors that influence sampling acceptance will inform more successful testing strategies.</span></p>
Postoperative Pain and Skin Closure Methods After Cesarean Section
ClinicalTrials.gov study NCT02028000. IPD Sharing: Not stated. Countries: 1. Publications: 11.
The Impact of Mechanical Methods on the Postpartum Haemorrhage Prophylaxis During Caesarean Section
ClinicalTrials.gov study NCT05948436. IPD Sharing: YES. Countries: 1. Publications: 1.
New Method of IUD Insertion During Cesarian Section
ClinicalTrials.gov study NCT05756998. IPD Sharing: NO. Countries: 1. Publications: 2.
Comparison of Two Methods of Administration of the Epidural, by Programmed Intermittent Bolus or Continuous Perfusion, on the Incidence of Cesarean Sections and Instrumented Deliveries in Primiparous
ClinicalTrials.gov study NCT02705872. IPD Sharing: Not stated. Countries: 1. Publications: 10.
External Pop Out cs vs Conventional Method for Fetal Head Extraction in Repeatedcaesarean Section.
ClinicalTrials.gov study NCT04968340. IPD Sharing: YES. Countries: 1. Publications: 2.
The Effect of Paula Method Exercises on Post-cesarean Section Distension
ClinicalTrials.gov study NCT05283707. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Prediction of Hypotension After Spinal Anesthesia in Cesarean Sections Using Non-Invasive Measurement Methods
ClinicalTrials.gov study NCT06847737. IPD Sharing: NO. Countries: 1. Publications: 3.
Nasopharyngeal swabs vs. saliva sampling for SARS-CoV-2 detection: A cross-sectional survey of acceptability for caregivers and children after experiencing both methods
Open the record for dataset details and reuse information.
METHODS. Bovine ilia were used in the simulations because their histological structure (a fibrolamellar cortex overlying cancellous bone26) was found to match that of the Triceratops ilium. Bone sections 10 x 50 x 縠 3.0 cm with cortices ranging from 0.5 to 5.5 mm in depth (the range of initial cortical-thickness estimates based on gross morphology) were mounted on a servohydraulic mechanical loading frame (MTS Bionix, Minneapolis) and penetrated with an aluminium-bronze T. rex tooth replica. The replica was cast from an actual adult T. rex maxillary tooth, after casts made from some ofthe deeper bite marks revealed the size and shape of the teeth that had impacted the pelvis8 • The replica was penetrated into the ilia sections at 1 mm s-1 to a depth of 11.5 mm, equivalent to the maximum depth of the deepest ilium bite mark8 • Forces were measured with an MTS 25 N strain-gauge-based axial load cell accurate to 0.2%. The forces increased with increasing penetration depth even after the cortical layer had been perforated and the underlying cancellous bone was being crushed. The increase in force with penetration depth is attributed to a greater cortical surface area coming into contact with the semi-conical penetrator tooth as it descended through the ilia. in Bite-force estimation for Tyrannosaurus rex from tooth-marked bones
METHODS. Bovine ilia were used in the simulations because their histological structure (a fibrolamellar cortex overlying cancellous bone26) was found to match that of the Triceratops ilium. Bone sections 10 x 50 x 縠 3.0 cm with cortices ranging from 0.5 to 5.5 mm in depth (the range of initial cortical-thickness estimates based on gross morphology) were mounted on a servohydraulic mechanical loading frame (MTS Bionix, Minneapolis) and penetrated with an aluminium-bronze T. rex tooth replica. The replica was cast from an actual adult T. rex maxillary tooth, after casts made from some ofthe deeper bite marks revealed the size and shape of the teeth that had impacted the pelvis8 • The replica was penetrated into the ilia sections at 1 mm s-1 to a depth of 11.5 mm, equivalent to the maximum depth of the deepest ilium bite mark8 • Forces were measured with an MTS 25 N strain-gauge-based axial load cell accurate to 0.2%. The forces increased with increasing penetration depth even after the cortical layer had been perforated and the underlying cancellous bone was being crushed. The increase in force with penetration depth is attributed to a greater cortical surface area coming into contact with the semi-conical penetrator tooth as it descended through the ilia.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.