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328 results for “Simulation results”

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zenodo52/100

Explicit FE simulation results for orthopedic screw-bone interaction, for different screw geometries and bone quality

<p>The dataset disclosed herein was employed to train artificial neural network surrogate models, specifically for tasks related to screw optimization. Please read "_readMe.txt" before using.</p>

opencc-by-4.0Nov 2023View details →
zenodo48/100

Evaluation datasets and results for the paper "Enhancing Business Process Simulation Models with Extraneous Activity Delays"

<p>Event-logs and Business Process Simulation Models used in the experimentation of the paper &quot;Enhancing Business Process Simulation Models with Extraneous Activity Delays&quot;, where the &#39;<em>inputs</em>&#39; folder contains all the files used as input, and the &#39;<em>output</em>&#39; folder the results of the evaluation.</p> <p>&nbsp;</p> <p><em><strong>Inputs</strong></em>: event-logs, BPS models, and simulation parameters used as input in the experimentation.</p> <ul> <li><em><strong>Real-life</strong></em>:&nbsp;real-life event logs, corresponding to&nbsp;two disjoint subsets of traces from an Academic Credentials&#39; process, and the BPIC 2012 and BPIC 2017 event logs (filtered as explained in the paper), and the BPS model (plus simulation parameters) used as input for each dataset in the presented approach.</li> <li><em><strong>Synthetic</strong></em>: simulated event-logs and&nbsp;corresponding BPS models (plus simulation parameters) for four different processes with 0, 1, 3 and 5 timer events.</li> </ul> <p><em><strong>Outputs</strong></em>: results of the experimentation.</p> <ul> <li><em><strong>Real-life</strong></em>: results corresponding to the evaluation with real-life event logs.&nbsp;Each of the folders is composed by the original and the&nbsp;enhanced BPS models, 10 event logs simulated with each of them, two folders with the best iteration of the two hyperparameter optimization processes, and the values for&nbsp;the injected timers in each case. In addition, a CSV file with the EMD metrics (cycle time and absolute hour event distribution) for each dataset is provided.</li> <li><em><strong>Synthetic</strong></em>: results corresponding to the simulated event-logs. <ul> <li>Before-After: BPS models and discovered timer events for the four synthetic processes, with five timers placed before and after different activity instances.</li> <li>Complete: BPS models and quality measures (precision, recall, and SMAPE of the discovered timers)&nbsp;for the four synthetic processes with zero, one, three, and five timer events.</li> <li>Individual: event logs enhanced with the discovered extraneous delay for each activity instance, for the four synthetic processes with zero, one, three, and five timer events; and SMAPE of the estimations.</li> </ul> </li> </ul>

opencc-by-4.0Jun 2022View details →
zenodo48/100

Source code and simulation results for nanoantennas supporting an enhanced Purcell factor due to interfering resonances

<p><strong>Summary</strong></p> <p>Data and source code relate to the article &quot;<a href="https://doi.org/10.1103/PhysRevResearch.4.023189">Enhanced Purcell factor for nanoantennas supporting interfering resonances</a>&quot; [1], whose subject are the effects of coupled resonances and quasibound states in the continuum on the Purcell factor in dielectric resonant nanoantennas. The provided scripts&nbsp;reproduce&nbsp;the analysis of interfering resonances in a nanodisk coupled to an enclosed emitter and can be easily adapted for further investigations.&nbsp;</p> <p><strong>Structure</strong></p> <p>The cases refer to different aspect ratios of the nanodisk with (a and b) and without (c and d) substrate. The scans reproduce the data used to find the aspect ratios (a and c) supporting the maximal Purcell enhancement.&nbsp;</p> <p><a href="https://doi.org/10.1016/j.softx.2021.100763">RPExpand</a> [2] is used for Riesz projection expansions, which quantify the interactions of the resonances.</p> <p>The directories <strong>resonance</strong> and <strong>scattering&nbsp;</strong>contain input files for the commercial software JCMsuite, which rigorously solves Maxwell&#39;s equations with the finite-element method (FEM). In order&nbsp;to switch to a custom setup, you must adapt these input files. If you want to recalculate all results, make sure that you remove the directories containing resultbags. These are stored in the directory <strong>results</strong>, e.g., results/case_a/resultbags.</p> <p><strong>Requirements</strong></p> <ul> <li>JCMsuite (tested with version: 4.6.3)</li> <li>Matlab (tested with version: R2019b)</li> </ul> <p>In order to run the scripts you must replace the corresponding place holders in the files by&nbsp;a path to your installation of JCMsuite. Free trial licenses are available, please refer to the homepage of&nbsp;<a href="https://jcmwave.com/">JCMwave</a>.&nbsp;</p> <p>[1]&nbsp;R&eacute;mi Colom, Felix Binkowski, Fridtjof Betz, Yuri Kivshar, Sven Burger,&nbsp;Enhanced Purcell factor for nanoantennas supporting interfering resonances, Physical Review Research <strong>4</strong>, 023189 (2022),&nbsp;https://doi.org/10.1103/PhysRevResearch.4.023189</p> <p>[2] Fridtjof Betz, Felix Binkowski, Sven Burger, RPExpand: Software for Riesz projection expansion of resonance phenomena, SoftwareX <strong>15</strong>,&nbsp;100763 (2021), https://doi.org/10.1016/j.softx.2021.100763</p>

opencc-by-4.0Jun 2022View details →
zenodo48/100

Simulation results: Radiative cooling induced coherent maser emission in relativistic plasmas

<p>This repository contains some of the simulation data presented in the recent article titled <em>"Radiative cooling induced coherent maser emission in relativistic plasmas"</em> (<a href="https://arxiv.org/abs/2409.18955" target="_new" rel="noopener">https://arxiv.org/abs/2409.18955</a>). The data available are from 2D particle-in-cell (PIC) simulations, which investigate the effects of radiative cooling in relativistic plasmas and its role in inducing coherent maser emission. The simulations were performed using OSIRIS, a massively parallel and fully-relativistic PIC code.</p> <p>The electric field data in the third direction (E3) included here has been spatially averaged by a factor of 8 in both directions, resulting in a dataset that reflects a resolution 64 times lower than the actual simulation. Additionally, the raw data includes only one two-thousandth of the simulated electron macro-particles. Also included is the phase space data in the x2, p2, and p3 dimensions.</p> <p>These datasets represent key aspects of the simulation results discussed in the paper, where the focus is on understanding the interplay between radiative losses and coherent emission mechanisms.</p> <p>More details on the simulations and the analysis of these results can be found in the corresponding article.</p>

opencc-by-4.0Oct 2024View details →
zenodo48/100

Trajectory-Aware Rate Adaptation for Aerial Networks Simulation Results

<p><strong>Introduction</strong></p> <p>Even though the concept of ubiquitous wireless connectivity is becoming a reality, there are scenarios where wireless communications coverage is insufficient or does not exist. Considering natural and man-made disaster scenarios, communications infrastructures may be damaged and become unavailable. In temporary crowded events, the existing infrastructure may not have been designed to cope with the additional traffic demand, resulting in overload. In maritime scenarios, environmental monitoring activities using autonomous vehicles will take place in offshore zones, typically not in range of existing onshore communications infrastructures.</p> <p>Flying networks, composed of Unmanned Aerial Vehicles (UAV), are emerging as a flexible and cost-effective solution to provide on-demand wireless connectivity in such scenarios. UAVs have the possibility to operate virtually everywhere, and the growing payload capacity makes them suitable platforms to carry wireless communications hardware, playing the role of mobile base stations, access points or relay nodes. A flying network may typically be composed of a fleet of UAVs, organized in a multi-tier topology with so-called Flying Edge Nodes (FENs) and Flying Gateways (FGWs) <a href="https://doi.org/10.1016/j.adhoc.2022.103000">[1]</a>. FENs can play the role of Flying Access Points that provide the access network to the users on the ground, or the role of Flying Sensor Nodes that can perform video surveillance missions. The FENs forward the traffic to the FGWs, that act as relay nodes and are responsible for forwarding the traffic to/from the backhaul (BKH) network and ultimately to/from the Internet.</p> <p>The flying network concept brings up new challenges. The flying nodes need to be properly positioned and their wireless link configuration dynamically adjusted in order to ensure the Quality of Service (QoS) expected by the end users. In addition, these scenarios are typically highly unpredictable due to the varying locations as well as the concentration/dispersion of end-users and their movements regarding direction and velocity - e.g., vehicles or pedestrians. Therefore, a static wireless link configuration and UAV positioning are not adequate. State of the art work has been mainly focused on the optimal positioning of the flying nodes, having most of the wireless link parameters statically configured with default values. The Rate Adaptation challenge is well-known in fixed or low mobility IEEE 802.11 networks, and Minstrel High Throughput (HT) <a href="https://lwn.net/Articles/376765">[2]</a> is the default Wi-Fi rate adaptation algorithm used in the Linux kernel since the IEEE 802.11n version. However, few works propose solutions designed to consider the characteristics of other communications environments, such as flying and vehicular networks <a href="https://doi.org/10.1007/s11276-020-02295-2">[3]</a>. To the best of our knowledge, solutions that use the node trajectory information to predict the wireless channel conditions and perform rate adaptation are yet to be developed.</p> <p>The main contribution of this paper is the Trajectory-Aware Rate Adaptation (TARA) algorithm. TARA takes advantage of knowing the trajectory of all nodes in the flying network to estimate future changes in the wireless link quality and perform rate adaptation accordingly. The network performance improvement achieved with TARA was evaluated using ns-3 <a href="https://doi.org/10.1007/978-3-642-12331-3_2">[4]</a>. The simulation results presented in this dataset show significant throughput gains when compared with conventional rate adaptation algorithms.</p> <p><strong>Folder Organization</strong></p> <p>The following dataset presents the results of the TARA Paper, organized in different folders for each Rate Adaptation Algorithm, as well as the random seeds that were used to obtain such results:</p> <p><strong>Naming Convention:</strong></p> <ul> <li>Rate Adaptation Algorithm<strong>&nbsp; </strong> <ul> <li><strong>tara </strong>&ndash; Trajectory-Aware Rate Adaptation</li> <li><strong>min </strong>&ndash; MinstrelHTWifiManager</li> <li><strong>id </strong>&ndash; IdealWifiManager</li> </ul> </li> </ul> <p><strong>Folder Content: </strong></p> <ul> <li><em>distances.csv - </em><strong>Distances between nodes</strong> <ul> <li>Column 1 &ndash; <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 &ndash; <strong>Distance between BKH and FGW</strong> (meters)</li> <li>Column 3 &ndash; <strong>Distance between FEN and FGW </strong>(meters)</li> </ul> </li> <li><em>positions.csv</em> <em>- </em><strong>Current 3D position of nodes</strong> <ul> <li>Column 1 &ndash; <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 &ndash; <strong>BKH x </strong>(meters)</li> <li>Column 3 &ndash; <strong>BKH y </strong>(meters)</li> <li>Column 4&nbsp;&ndash; <strong>BKH z </strong>(meters)</li> <li>Column 5 &ndash; <strong>FEN x </strong>(meters)</li> <li>Column 6 &ndash; <strong>FEN y </strong>(meters)</li> <li>Column 7 &ndash; <strong>FEN z </strong>(meters)</li> <li>Column 8 &ndash; <strong>FGW x </strong>(meters)</li> <li>Column 9 &ndash; <strong>FGW y </strong>(meters)</li> <li>Column 10 &ndash; <strong>FGW z </strong>(meters)</li> </ul> </li> <li><em>throughput.csv</em> - <strong>Link Specific Throughput, at MAC layer level</strong> <ul> <li>Column 1 &ndash; <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 &ndash; <strong>Relay Link (BKH - FGW), Throughput measured in BKH </strong>(Mbit/second)</li> <li>Column 3 &ndash; <strong>Access Link (FEN - FGW), Throughput measured in FEN </strong>(Mbit/second)</li> <li>Column 4&nbsp;&ndash; <strong>Relay Link (BKH - FGW), Throughput measured in FGW </strong>(Mbit/second)</li> <li>Column 5 &ndash; <strong>Access Link (FEN - FGW), Throughput measured in FGW </strong>(Mbit/second)</li> </ul> </li> </ul>

opencc-by-4.0Jun 2023View details →
zenodo48/100

Simulation results of adaptive multicast streaming for videoconferences in software-defined networks

<p>Real-time applications, such as video conferences, have strong Quality of Service requirements for ensuring a decent Quality of Experience. Nowadays, most of these conferences are performed over wireless devices. Thus, an appropriate management of both heterogeneous mobile devices and network dynamics is necessary. Software Defined Networking enables the use of multicasting and stream layering inside the network nodes, two techniques able to enhance the quality of live video streams. In this paper, we propose two algorithms for building and maintaining multicast sessions in a software-defined network. The first algorithm sets up the initial multicast trees for a given call. It optimally places the stream layer adaptation function inside the core network in order to minimize the bandwidth consumption. This algorithm has two versions: the first one, based on shortest path trees is minimizing the latency, while the second one, based on spanning trees is minimizing the bandwidth consumption. The second algorithm adapts the multicast trees according to the network changes occurring during a call. It does not recompute the trees, but only relocates the stream layer adaptation functions. It requires very low computation at the controller, thus making our proposal fast and highly reactive. Extensive simulation results confirm the efficiency of our solution in terms of processing time and bandwidth savings compared to existing solutions such as multiple unicast connections, Multipoint Control Unit solutions and application layer multicast.</p>

opencc-by-4.0Apr 2018View details →
zenodo48/100

GR4SP Suite: Additional Data and Simulation Results

<p>This entry is for the GR4SP&#39;s Suite,&nbsp;a model and simulation tool used to analyse the Victorian electricity system&#39;s history and potential future transition pathways. It includes&nbsp;additional input data and simulation results. Most of these files were used or&nbsp;generated with Jupyter Notebook&nbsp;scripts shared in the author&#39;s <a href="https://github.com/gr4sp/simulationEngine">GitHub repository</a>.&nbsp;</p> <p>Input data in YAML files include VIC.yaml with&nbsp;input settings for the business-as-usual scenario. Some of these inputs can be changed to achieve different future trajectories. For example, try increasing 25% the <em>basePrice </em>of Brown Coal and check how this could impact future emission trajectories, electricity production from renewable energy, and spot prices.</p> <p>This entry includes Sobol&#39;s sensitivity indices, the Elementary Effects Test (EET) mu* and sigma. The Morris and Sobol sampling results are saved as .tar.gz files with corresponding names.&nbsp;</p> <p>The input data and results for the Energy Vulnerability (EV) assessment&nbsp;quantifying the LIHC indicator and the data used for the Sectoral Network Analysis (SNA) (i.e. ActorActorRelV0.8.csv).&nbsp;</p> <p>This also includes the results from exploring future pathways of the electricity system using EMA workbench&#39;s PRIM, FS and other tools for open exploration (https://emaworkbench.readthedocs.io/en/latest/). The exploration was guided by three scenarios: Low-Carbon Transition (LCT), Just Transition (JT), and Sustainability Transition (ST). Any additional file with BAU in the name includes the results for the Business-as-usual scenario.</p> <p>This version of the dataset includes a few results of policy mixes to achieve any of the three transition scenarios generated in the Jupyter Notebook <a href="https://github.com/gr4sp/experiments/blob/main/notebooksGr4sp/ScenariosAnalysis.ipynb">ScenariosAnalysis</a>. The zip file &quot;policyMixesResults&quot; contains the .csv file with the outputs for different input changes. These details of the input changes for each file are in the &quot;ScenarioAnalysisOutputDetailsv0.2.xlsx&quot;. The outputs of the model for these policy mixes can be found in the zip file&nbsp;&quot;policyMixesFigs&quot;.</p>

opencc-by-4.0May 2022View details →
edi48/100

Plot-level field data and model simulation results, archived to accompany Turner et al. manuscript; reports data from summer 2017 sampling of short-interval fires that burned during summer 2016 in Greater Yellowstone.

Subalpine forests in the northern Rocky Mountains have been resilient to stand-replacing fires that historically burned at 100–300-yr intervals. Fire intervals are projected to decline drastically as climate warms, and forests that reburn before recovering from previous fire may lose their ability to rebound. We studied recent fires in Greater Yellowstone (Wyoming, USA) and asked whether short-interval (less than 30 yrs) stand-replacing fires can erode lodgepole pine (Pinus contorta var. latifolia) forest resilience via increased burn severity, reduced early postfire tree regeneration, reduced carbon stocks, and slower carbon recovery. During 2016, fires reburned young lodgepole pine forests that regenerated after wildfires in 1988 and 2000. During 2017, we sampled 0.25-ha plots in stand-replacing reburns (n=18) and nearby young forests that did not reburn (n=9). We also simulated stand development with and without reburns to assess carbon recovery trajectories. Nearly all prefire biomass was combusted ("crown fire plus") in some reburns in which prefire trees were dense and small (≤ 4 cm basal diameter). Postfire tree seedling density was reduced six-fold relative to the previous (long-interval) fire, and high-density stands (greater than 40,000 stems ha-1) were converted to sparse stands (less than 1,000 stems ha-1). In reburns, coarse wood biomass and aboveground carbon stocks were reduced by 65% and 62%, respectively, relative to areas that did not reburn. Increased carbon loss plus sparse tree regeneration delayed simulated carbon recovery by greater than 150 yrs. Forests did not transition to nonforest, but extreme burn severity and reduced tree recovery foreshadow an erosion of forest resilience.

openCC (other)Apr 2019View details →
zenodo44/100

NAQPMS simulation results for analysis the effects of regional transport on haze in the North China Plain

<p>This directory contains data generated and used for paper &quot;Effects of regional transport on haze in the North China Plain: transport of precursors or secondary inorganic aerosols&quot;.</p> <p>This dataset contains the observed and simulated aerosols components of Beijing and surrounding cities; regional sources of secondary inrganic aerosols in Beijing; sources of secondary inorganic aerosols under relative clean and polluted conditions; and average differences of&nbsp; regional contribution to secondary inorganic aerosols between clean and polluted conditions; and data for supporting figures.</p>

opencc-by-4.0May 2020View details →
zenodo44/100

Simulation results for Sars-CoV2 3C-like main protease: TRAPP analysis of the binding site flexibility and results of the docking study

<p>Collection of data and scripts related to the paper:</p> <p>Jonas&nbsp;Gossen et al. &quot;A blueprint for high affinity SARS-CoV-2 Mpro inhibitors from activity-based compound library screening guided by analysis of protein dynamics&quot;&nbsp;</p> <p>https://www.biorxiv.org/content/10.1101/2020.12.14.422634v2&nbsp; &nbsp;doi:&nbsp;https://doi.org/10.1101/2020.12.14.422634</p> <p>ACS Pharmacology and Translational Science&nbsp; 2021 DOI:&nbsp;10.1021/acsptsci.0c00215</p> <p>&nbsp;</p> <p>&nbsp;</p> <p><strong>1. TRAPP simulation results for Sars-CoV2 3C-like main protease:</strong></p> <p>include simulation of the binding pocket druggability, physical-chemical properties, &nbsp;and the binding site composition</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/Protease_clean.ipynb">Protease_clean.ipynb</a>&nbsp; - Jupyter Notebook containing&nbsp; analysis of the generated data</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/allTables.zip">allTables.zip</a>&nbsp; - results of TRAPP simulations of the binding site flexibility using LRIP and tConcoord methods</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/Every10-ligand_6LU7_R3.5.zip">Every10-ligand_6LU7_R3.5.zip</a>&nbsp;-&nbsp;results of TRAPP pocket analysis on the MD frames</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/PDB-Giulia.zip">PDB-Giulia.zip</a>&nbsp;- TRAPP pocket analysis of 40 PDB complexes of main protease</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/TRAPP_properties_PDB.xlsx">TRAPP_properties_PDB.xlsx</a>&nbsp;- binding pocket properties for&nbsp;40 PDB complexes of main protease summarized in a table</p> <p><a href="https://zenodo.org/api/files/f6c0a0ae-d53a-4e78-aaaf-b3ff674171a5/DrugPDB_3structures.xlsx">DrugPDB_3structures.xlsx</a>&nbsp;-&nbsp;binding pocket properties for 3 PDB structures&nbsp;</p> <p><strong>2. Docking &amp; Screening Results</strong></p> <p><a href="https://zenodo.org/api/files/9165535d-aec5-4f1e-8ad1-6ca11a90e595/TRAPP_secondSelection_VS.csv">TRAPP_secondSelection_VS.csv</a>&nbsp;- docking/screening of selected structures from TRAPP analysis</p> <p><a href="https://zenodo.org/api/files/9165535d-aec5-4f1e-8ad1-6ca11a90e595/Fred_VS.csv">Fred_VS.csv</a>&nbsp;- docking of PDB structures using Fred</p> <p><a href="https://zenodo.org/api/files/9165535d-aec5-4f1e-8ad1-6ca11a90e595/Glide_VS.csv">Glide_VS.csv</a>&nbsp;- docking of PDB structures using Glide</p> <p><a href="https://zenodo.org/api/files/77b1679d-ccc9-4e30-add2-5f7420e04ed1/TableS1.xlsx">TableS1.xlsx</a> -&nbsp;&nbsp;Available structures of SARS-CoV-2 Mpro selected for binding site analyses.&nbsp;</p> <p><a href="https://zenodo.org/api/files/77b1679d-ccc9-4e30-add2-5f7420e04ed1/TableS2A.xlsx">TableS2A.xlsx</a>&nbsp;-&nbsp;SiteScore&nbsp;analysis of all the deposited X-ray crystal structures for the Mpro.</p> <p><a href="https://zenodo.org/api/files/77b1679d-ccc9-4e30-add2-5f7420e04ed1/TableS2B.xlsx">TableS2B.xlsx</a>&nbsp;-&nbsp;&nbsp;SiteScore&nbsp;analysis of the MSM ensemble (4-macrostates).</p>

opencc-by-4.0Nov 2020View details →
zenodo44/100

Full Results from Simulations for Static and Dynamic Workloads Using BSC Slurm Simulator

<p>This dataset contains two CSV files. One is for the static runs, done by emulating LUMI's supercomputer environment, and dynamic, using CEA-Curie workload taken from Feitelson's repository.</p>

opencc-by-4.0Mar 2024View details →
zenodo44/100

Data and Results of eELib Simulations for the User-Based Multi-Use of Battery Storage Systems

<p>The dataset contains the configuration for the eElib models (model_data.json) and computed simulation results (.hdf5-files). The following scenarios were computed:</p> <ul> <li>ave_A_static-eq</li> <li>ave_A_static</li> <li>ave_A_dynamic_charging</li> <li>ave_A_fully_dynamic</li> <li>ave_B_static-eq_bss</li> <li>ave_B_static_bss</li> <li>ave_B_dynamic_charging_bss</li> <li>ave_B_fully_dynamic_bss</li> <li>MELANI_static</li> <li>MELANI_static_equal</li> <li>MELANI_dynamic_charging</li> <li>MELANI_fully_dynamic</li> </ul> <p><strong>Description of syntax of simulation results:</strong></p> <ul> <li>average (ave_B is half the size of the BSS of ave_A) and MELANI describe the considered multi-family house</li> <li>static/ static / dynamic_charging / fully_dynamic are the three developed operating strategies for the user-based multi-use</li> <li>static-equal: the allocation keys are equally, i.e., the PVS and BSS capabilities are equally distributed among the households of the multi-family house</li> </ul> <div> <div><strong>As part of the publication:</strong></div> <div>Henrik Wagner, Constantin von L&uuml;tzow, Marcel L&uuml;decke, Michel Meinert, Bernd Engel "Empowering Collective Self-Consumption in Multi-Family Houses: User-Based Multi-Use of Residential Battery Storage Systems", 23rd Wind &amp; Solar Integration Workshop 2024, Helsinki, Finland, doi: 10.1049/icp.2024.3901</div> <div>&nbsp;</div> <div><strong>Changelog:</strong></div> <div>v2: Added doi for WIW 2024 conference paper to improve citation possibilities</div> </div>

opencc-by-4.0Oct 2024View details →
zenodo44/100

Source code and simulation results for the computation of eigenfrequency sensitivities using Riesz projections for efficient optimization of nanophotonic resonators

<p><strong>Summary</strong></p> <p>Data and source code relate to the article &quot;Computation of eigenfrequency sensitivities using Riesz projections for<br> efficient optimization of nanophotonic resonators&quot; [<a href="https://doi.org/10.1038/s42005-022-00977-1">1</a>]. It combines direct differentiation of scattering problems with a contour integral method [<a href="https://doi.org/10.1016/j.jcp.2020.109678">2</a>]&nbsp;to compute eigenfrequency sensitivities. An optimization is used to demonstrate the relevance of the method.</p> <p><strong>Structure</strong></p> <p>The most important elements of this publication are the MATLAB scripts &#39;sensitivities.m&#39; and &#39;optimization.m&#39;, which can be used to reproduce the most important results of the paper. The directories&nbsp;<strong>code</strong>,&nbsp;<strong>scattering</strong>&nbsp;and&nbsp;<strong>results&nbsp;</strong>contain the software RPExpand&nbsp;[<a href="https://doi.org/10.1016/j.softx.2021.100763">3</a>], input files for JCMsuite [<a href="https://doi.org/10.1002/pssb.200743192">4</a>] and results produced with the scripts, respectively. Furthermore, the latter contains the subfolder&nbsp;<strong>tabulated,</strong>&nbsp;which contains text files&nbsp;tabulating&nbsp;data presented&nbsp;in Figures 2 and 4 of the paper. Eventually, the function &#39;code/observation.m&#39; evaluates the target for the optimization.</p> <p><strong>Additional Information</strong></p> <p>The applicaton is based on an example from the literature [<a href="https://doi.org/10.1126/science.aaz3985">5</a>]. Using apriori knowledge about the eigenmode of interest, we chose the scalar observable, as defined in Section B of the paper, to be&nbsp;the component of the electric field normal to the plane defining the solid&nbsp;of revolution.</p> <p>The convergence studies are based on the discrete, circular contour&nbsp;<span>\(\tilde{C} = \big\{ c_n~|~ c_n=r_0 e^{2\pi i n/8}, n \in \{0,1,...,7\}\big\}\)</span>&nbsp;with center <span>\(\omega_0 = 2 \pi c/(1600~\mathrm{nm})\)</span>&nbsp;and radius <span>\(r_0 = \omega_0\times10^{-2}\)</span>. For finite element degrees <span>\(d\)</span> higher than 5, the error saturates. For this reason, the differences between results for <span>\(d=5\)</span> and <span>\(d = 6\)</span> may depend on the hardware architecture.</p> <p>A larger radius&nbsp;<span>\(r = 4\times10^{13}\)</span> has been chosen for the optimization to include information from poles located further away from the frequency of interest. The target function <span>\(t(p_1,\dots,p_5) = -q_n \left(1 - \frac{(\omega_n-\omega_0)^2}{r^2} \right)\)</span>is minimized. The first factor is the negative <em>Q-</em>Factor and the second factor ensures that the target is zero at the boundary. If no eigenfrequency&nbsp;<span>\(\omega_n\)</span>&nbsp;is located inside the contour, the target is set to zero. For the purpose of this data publication some numerical parameters have been improved. This resulted in a faster convergence of the optimization.</p> <p><strong>Requirements</strong></p> <ul> <li>JCMsuite (version 5.2.0 or newer)</li> <li>MATLAB (tested with version R2019b)</li> </ul> <p>In order to run the scripts you must replace the corresponding place holders in the files by&nbsp;a path to your installation of JCMsuite. Free trial licenses are available, please refer to the homepage of&nbsp;<a href="https://jcmwave.com/">JCMwave</a>.&nbsp;</p> <p><strong>References</strong></p> <p>[1] Felix Binkowski, Fridtjof Betz, Martin Hammerschmidt, Philipp-Immanuel Schneider, Lin Zschiedrich, Sven Burger,&nbsp;Computation of eigenfrequency sensitivities using Riesz projections for efficient optimization of nanophotonic resonators, Communications Physics&nbsp;<strong>5</strong>, 202&nbsp;(2022),&nbsp;https://doi.org/10.1038/s42005-022-00977-1</p> <p>[2] Felix Binkowski, Lin Zschiedrich,&nbsp;Sven Burger,&nbsp;A Riesz-projection-based method for nonlinear eigenvalue problems,&nbsp;Journal of Computational Physics&nbsp;<strong>419</strong>, 109678 (2020),&nbsp;https://doi.org/10.1016/j.jcp.2020.109678</p> <p>[3]&nbsp;Fridtjof Betz, Felix Binkowski, Sven Burger, RPExpand: Software for Riesz projection expansion of resonance phenomena, SoftwareX <strong>15</strong>,&nbsp;100763 (2021), https://doi.org/10.1016/j.softx.2021.100763</p> <p>[4] Jan Pomplun, Sven Burger, Lin Zschiedrich, Frank Schmidt,&nbsp;Adaptive finite element method for simulation of optical nano structures, Physica Status Solidi B&nbsp;<strong>244</strong>, 3419 (2007),&nbsp;http://dx.doi.org/10.1002/pssb.200743192</p> <p>[5]&nbsp;Kirill Koshelev, Sergey Kruk, Elizaveta Melik-Gaykazyan, Jae-Hyuck Choi, Andrey Bogdanov, Hong-Gyu Park, Yuri Kivshar,&nbsp;Subwavelength dielectric resonators for nonlinear nanophotonics, Science&nbsp;<strong>367</strong>, 288 (2020), http://dx.doi.org/%2010.1126/science.aaz3985</p>

opencc-by-4.0Aug 2022View details →
zenodo44/100

Deliverable 1.1.1.1 BEL-Float project | Dataset containing the results of numerical simulations (motions, forces) of the operational performance analysis - Input files

<p>This dataset contains the parent input used to generate the simulation files of the DeepCwind OC4 semi-submersible combined with the 5MW NREL turbine for various wind and wave conditions. The basis of the OpenFAST input files are taken from&nbsp;<a href="https://github.com/OpenFAST/r-test/tree/main/glue-codes/openfast/5MW_OC4Semi_WSt_WavesWN">OpenFAST r-test GitHub repository (5MW_OC4Semi_WSt_WavesWN)</a>&nbsp;and adapted to simulate various wind and wave conditions. The turbulent wind field as the input to the InflowWind module is generated using&nbsp;<a href="https://www.nrel.gov/wind/nwtc/turbsim.html">TurbSim</a>. The simulations are performed on a modified version of OpenFAST v3.5.3 to which adaptation to the code is made to extract additional Morison drag output up to 16 cylindrical members. This adapted code is&nbsp;<a href="https://github.com/abkpribadi/openfast/tree/Morison_additional_output">uploaded on GitHub as a branch from a forked OpenFAST repository</a>. In total there are 1152 simulation results consists of 768 irregular waves and 384 regular waves cases. The complete dataset is divided into 9 sub-datasets, see "Related work" section. A report describing this dataset will be made available on BEL-Float project website by November 2024: https://www.owi-lab.be/bel-float.</p>

opencc-by-4.0Oct 2024View details →
zenodo44/100

Danish case study simulation results (consumption, offered & accepted flexibility, revenues & expenses)

<p>This file contains results of the simulations of the Danish case study generated during Horizon 2020 MAGNITUDE project. The case study considers the provision of domestic hot water from 350 heat pumps installed in multi-storey apartment buildings. Heat pumps receive energy from electrical grid and use heat from ultra-low temperature district heating (ULTDH) as heat source. The overall system is referred to as Multi-Energy System (MES). MES can provide flexibility to either intra-day (ID) market or redispatch (RE) services to local distribution system operator. Results show how much flexibility was offered and activated, and the resulting consumption and production profiles due to that. In addition, the revenues and expenses based on the historical prices for Denmark in 2018 had been calculated.</p>

opencc-by-4.0Jun 2021View details →
zenodo44/100

Benchmarking (multi)wavelet-based dynamic and static non-uniform grid solvers for flood inundation modelling (Simulation results)

<p>Simulation result data for Environment Agency benchmark test 5, Thamesmead hypothetical flood, and Carlisle 2005 case studies, using uniform DG2, adaptive MWDG2, adaptive HWFV1, non-uniform DG2, non-uniform FV1 and non-uniform ACC solvers.&nbsp;</p> <p>Model results are archived in 3 zip files:</p> <ul> <li>EA5.zip contains results of Environment Agency test 5 (N&eacute;elz and Pender, 2013)</li> <li>Thamesmead.zip contains results of&nbsp;Thamesmead hypothetical flood (Liang et al., 2008)</li> <li>Carlisle.zip contains results of Carlisle 2005 flooding (Neal et al., 2009)</li> </ul> <p>The results are stored with the following file extensions:</p> <ul> <li>&quot;.wd&quot;&nbsp;for 2D flood inundation maps in&nbsp;ESRI ASCII format</li> <li>&quot;.stage&quot; for water depth or water level time-series&nbsp;at staging&nbsp;points in tabulated text format</li> <li>&quot;.velocity&quot; for velocity time-series at staging points&nbsp;in tabulated text format</li> </ul> <p>Model outputs are stored under directories named for each solver.</p> <p><strong>References</strong></p> <p>N&eacute;elz, S., &amp; Pender, G. (2013). Benchmarking the latest generation of 2D hydraulic modelling packages. <em>Environment Agency: Bristol, UK</em>.</p> <p>Liang, Q., Du, G., Hall, J. W., &amp; Borthwick, A. G. (2008). Flood Inundation Modeling with an Adaptive Quadtree Grid Shallow Water Equation Solver. <em>Journal of Hydraulic Engineering</em>, <em>134</em>(11), 1603&ndash;1610. https://doi.org/10.1061/(ASCE)0733-9429(2008)134:11(1603)</p> <p>Neal, J. C., Bates, P. D., Fewtrell, T. J., Hunter, N. M., Wilson, M. D., &amp; Horritt, M. S. (2009). Distributed whole city water level measurements from the Carlisle 2005 urban flood event and comparison with hydraulic model simulations. <em>Journal of Hydrology</em>, <em>368</em>(1&ndash;4), 42&ndash;55. https://doi.org/10.1016/j.jhydrol.2009.01.026</p> <p>&nbsp;</p>

opengpl-2.0Jun 2021View details →
zenodo44/100

3D geological models of dolomitized clinoforms and flow simulation results: scenario 2 in Teoh, C.P. et al (2021)

<p>3D geological models of dolomitized clinoforms (10 different realisations) and flow simulation results according to Scenario 2 in Teoh, C.P. et al (2021) doi:<a href="http://doi.org/10.1016/j.marpetgeo.2021.105344">10.1016/j.marpetgeo.2021.105344</a>.<br> Models are built using surface-based modelling approach (doi:<a href="https://doi.org/10.1007/s11004-018-9764-8">10.1007/s11004-018-9764-8</a>). Flow simulations are run with IC-FERST, using unstructured tetrahedral meshes that adapt to geological heterogeneity and flow behaviour throughout the simulation to improve simulation quality and performance.</p> <p>For each of the 10 stochastic realisations, 5 geological models are available with corresponding flow simulation results:<br> - Only clinoforms and facies boundaries<br> -&nbsp;1 dolomite body per clinothem (~20% dolomite)<br> - 2 dolomite bodies per clinothem (~40% dolomite)<br> - 3&nbsp;dolomite bodies per clinothem (~60% dolomite)<br> - 4&nbsp;dolomite bodies per clinothem (~80% dolomite)<br> <br> Input model files&nbsp;for simulation are provided in Exodus (.e) and GMSH (.msh) formats.<br> Flow simulation settings are provided for IC-FERST in .mpml files (<a href="http://multifluids.github.io/">multifluids.github.io</a>)<br> Flow simulation results are provided as:</p> <ul> <li>&nbsp; 3D unstructured adaptive mesh in .vtu format, which can be opened with Paraview (www.paraview.org). Time interval between successive mesh outputs is 1 month.</li> <li>&nbsp; In- and outflow rates and volumetric proportions per phase in .csv</li> </ul> <p>Naming of files and folders:<br> <em>Sxxxxxx_yyyyz</em> where:<br> &#39;<em>xxxxxx</em>&#39; is the stochastic&nbsp;seed number used to sample the input statistics and create the geological model<br> &#39;<em>yyyy</em>&#39; is either &#39;clino&#39; or &#39;dolo&#39; to indicate if the model represents respectively only&nbsp;clinoforms, or contains dolomite bodies&nbsp;<br> &#39;<em>z</em>&#39; corresponds to&nbsp;the number of dolomite bodies per clinothem</p>

opencc-by-4.0Jun 2021View details →
zenodo44/100

3D geological models of dolomitized clinoforms and flow simulation results: scenario 1 in Teoh, C.P. et al (2021)

<p>3D geological models of dolomitized clinoforms (10 different realisations) and flow simulation results according to Scenario 1 in Teoh, C.P. et al (2021)&nbsp;doi:<a href="http://doi.org/10.1016/j.marpetgeo.2021.105344">10.1016/j.marpetgeo.2021.105344</a>.<br> Models are built using surface-based modelling approach (doi:<a href="https://doi.org/10.1007/s11004-018-9764-8">10.1007/s11004-018-9764-8</a>). Flow simulations are run with IC-FERST, using unstructured tetrahedral meshes that adapt to geological heterogeneity and flow behaviour throughout the simulation to improve simulation quality and performance.</p> <p>For each of the 10 stochastic realisations, 5 geological models are available with corresponding flow simulation results:<br> - Only clinoforms and facies boundaries<br> -&nbsp;1 dolomite body per clinothem (~20% dolomite)<br> - 2 dolomite bodies per clinothem (~40% dolomite)<br> - 3&nbsp;dolomite bodies per clinothem (~60% dolomite)<br> - 4&nbsp;dolomite bodies per clinothem (~80% dolomite)<br> <br> Input model files&nbsp;for simulation are provided in Exodus (.e) and GMSH (.msh) formats.<br> Flow simulation settings are provided for IC-FERST in .mpml files (<a href="http://multifluids.github.io/">multifluids.github.io</a>)<br> Flow simulation results are provided as:</p> <ul> <li>&nbsp; 3D unstructured adaptive mesh in .vtu format, which can be opened with Paraview (www.paraview.org). Time interval between successive mesh outputs is 1 month.</li> <li>&nbsp; In- and outflow rates and volumetric proportions per phase in .csv</li> </ul> <p>Naming of files and folders:<br> <em>Sxxxxxx_yyyyz</em> where:<br> &#39;<em>xxxxxx</em>&#39; is the stochastic&nbsp;seed number used to sample the input statistics and create the geological model<br> &#39;<em>yyyy</em>&#39; is either &#39;clino&#39; or &#39;dolo&#39; to indicate if the model represents respectively only&nbsp;clinoforms, or contains dolomite bodies&nbsp;<br> &#39;<em>z</em>&#39; corresponds to&nbsp;the number of dolomite bodies per clinothem</p>

opencc-by-4.0Jun 2021View details →
zenodo44/100

ITACA agent-based simulation model results

<p>This files downloaded present the raw results and derived indicators per scenario considered obtained with the agent-based model developed for policy assessment in the scope of the ITACA project (<a href="https://www.itaca-h2020.eu/">https://www.itaca-h2020.eu/</a>).</p> <p>The files are structured in three different case studies:</p> <ul> <li>CS01 - Past unsuccessful and delayed solutions</li> <li>CS02 - Past successful solutions</li> <li>CS03 - Future solutions</li> </ul> <p>In each case study there are included a set of scenarios, each of them testing one or several policy measures. Each scenario file includes the short name of the policy under study. For example, &quot;Results_visualisation_CS01_Mandates.xlsm&quot; includes the results when testing mandates as policy measure in the CS01 case study. The corresponding raw outputs of the simulator are included in the folder &quot;yyyymmdd_hhmmss_CS01_Mandates&quot;.</p> <p>Each excel file contains the following tabs:</p> <ul> <li>Files - Files loaded to create the file. The loading interactive buttons have been disabled to avoid errors.</li> <li>H0 - Tab containing the visualisation of different raw outputs for the adopters agents. The user can select all agents or one specific agent to look at the results by selecting its ID in the slicers on top of each agent type (enable editing in excel to do so).</li> <li>H0_KPI_tech - Shows the number of adoptions per technology and agent type</li> <li>H0_KPI_eco - Shows the surpluses per agent type and total social welfare</li> <li>H0_KPI_eco_metrics - Same results, disaggregated in a tabular format.</li> <li>H0_KPI_op - Shows the total fuel burnt, throughput and Determined Unitary Cost (DUC) for enroute and terminal ANS.</li> <li>H1 - Configuration file used as input for the simulation.</li> <li>H2 - Raw results for airlines.</li> <li>H3&nbsp;- Raw results for airports.</li> <li>H4&nbsp;- Raw results for&nbsp;enroute ANSPs.</li> <li>H5 - Raw results for&nbsp;terminal ANSPs.</li> <li>H6 - Raw results per route.</li> <li>H7 - Raw results for&nbsp;regulators.</li> </ul> <p>The raw results folders include, apart from the data shown in the visualisation excel files, the input data per stakeholder, policy parameters, technology parameters, exogenous variables that affect the agents and the charging zones defined in the European airspace.&nbsp;</p> <p>The complete description of the case studies and scenarios tested is included in ITACA&#39;s deliverable&nbsp;<a href="http://www.nommon-files.es/itaca/ITACA-D5.1_Impact_assessment_of_policies_and_regulations_to_boost_ATM_technology_adoption_v01.00.00.pdf">D5.1&nbsp;Impact Assessment of Policies and Regulations to Boost ATM Technology Adoption</a>.</p> <p>Thank you for downloading the dataset! It would be very helpful if you share your view on the data show with us. We have created the following short <a href="https://forms.gle/EgVAW57siXizsEn8A">questionnaire</a>&nbsp;to facilitate the task.&nbsp;</p>

opencc-by-4.0Nov 2022View details →
zenodo44/100

Dataset - Simulation results GNSS raytracing INTOMO

<p>The 3D ray-tracing&nbsp;algorithm is based on the reconstruction of the signal path&nbsp;within the grid model (3D refractivity field). For our studies, an extension of&nbsp;the original 3D ray-tracing module from ATom (Atmospheric Tomography)&nbsp;GNSS software package [37] is used. The necessary modifications were inspired&nbsp;by Javaherian et al. [44]. The first step of ray-tracing in our approach (shooting<br> technique) is based on the prior knowledge of transmitter and receiver positions, as well as information about weather parameters and thus, refraction&nbsp;at nodal points of the grid. The transmitter and receiver are the GPS satellite and the LEO satellite, respectively. In the current version, coordinates are&nbsp;delivered by atmPhs files in an earth-centered inertial (ECI) coordinate system&nbsp;[45].</p>

opencc-by-4.0Dec 2022View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
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