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2,078 results for “Soil data”

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edi64/100

Decomposition, porewater, plant and animal collection, and soil temperature data in Airport Marsh, Sapelo Island, 7/2019-7/2020

Environmental gradients can affect organic matter decay within and across wetlands and contribute to spatial heterogeneity in soil carbon stocks. We tested the sensitivity of decay rates to tidal flooding and soil depth in a minerogenic salt marsh using the tea bag index (TBI). Tea bags were buried at 10- and 50- cm along transects sited at lower, middle, and higher elevations that paralleled a headward eroding tidal creek. Plant and animal communities and soil properties were characterized once while replicate tea bags and porewaters were collected 3 and 4 times respectively over one year.

openCC (other)Dec 2024View details →
edi64/100

20-Year Synthesis of Soil Respiration Data at Harvard Forest 1991-2008

All data on soil carbon flux (“soil respiration”) collected using chamber-based methods at Harvard Forest from a range of observational and experimental plots were collated, their units were harmonized, and geographic (locations) and environmental characteristics (soil series, drainage class, soil temperature, soil moisture, vegetation type, etc.) were identified for each observation. This yielded a dataset with 106,192 observations of soil respiration taken between 1991 and 2008. These data provide a unique resource for exploring spatial and temporal patterns in soil respiration in a range of common New England forest types. For the Giasson, et al. (2013) publication, we also used 24 site-years of eddy covariance measurements from two Harvard Forest sites (EMS and Hemlock towers) to examine the relationship between soil and ecosystem respiration. Here, we present all derived/synthetic datasets associated with the manuscript. M.-A. Giasson, A. M. Ellison, R. D. Bowden, P. M. Crill, E. A. Davidson, J. E. Drake, S. D. Frey, J. L. Hadley, M. Lavine, J. M. Melillo, J. W. Munger, K. J. Nadelhoffer, L. Nicoll, S. V. Ollinger, K. E. Savage, P. A. Steudler, J. Tang, R. K. Varner, S. C. Wofsy, D. R. Foster, and A. C. Finzi 2013. Soil respiration in a northeastern US temperate forest: a 22-year synthesis. Ecosphere 4:art140. http://dx.doi.org/10.1890/ES13.00183.1

openCC0Dec 2023View details →
edi60/100

Soil microbial and physicochemical data from watersheds impacted by different management practices or wildfire in the Southern Appalachian Mountains, 2023

Four forested watersheds in Western North Carolina with different management practices or disturbance were sampled in the summer of 2023 to compare soil physicochemical, microbial, and functional differences. These data include mineral soil physicochemical properties (location, elevation, aspect, gravimetric moisture content, pH, total carbon and nitrogen, total organic carbon, dissolved organic carbon and nitrogen, total dissolved nitrogen, dissolved inorganic nitrogen (NO3 and NH4), and microbial biomass carbon and nitrogen), soil microbial properties (16S ASV community sequences, ITS ASV community sequences, extracellular enzyme activity, carbon mineralization rates, and ammonium mineralization rates), and organic soil properties (total organic carbon, total carbon and nitrogen, 16S ASV sequences, pH, and moisture). Together, this dataset provides context to understanding the impacts of different management practices and relevant disturbances, such as severe wildfire, on soil in the Southern Appalachian region.

openCC0Dec 2025View details →
edi60/100

Harmonized Soil Organic Carbon and Phosphorus Data for the Contiguous United States

Soil organic carbon (SOC) and soil phosphorus can strongly influence adjacent water quality by introducing nutrients into aquatic ecosystems and also altering the light environment of those ecosystems. However, national-scale data are uncommon, and even when available, they are usually not aggregated in a manner that is expeditiously merged with basin-level data. To facilitate national-scale analyses of soil data with co-located water quality data, we present aggregated SOC and soil phosphorus data for the Contiguous United States. Data are aggregated using the HydroBASINS basin shapefiles. HYBAS_ID is retained to enable merging with HydroBASINS parent datasets.

openCC0Jun 2025View details →
edi60/100

Air and soil temperature data from the Reference Stand network at the Andrews Experimental Forest, 1971 to present

The current network of temperature measurement sites are designed to represent spatial variability of air and soil temperature in rugged mountain topography, and serve as second-level stations to capture specific microclimate temperatures in conjunction with a network of Benchmark Meteorological Stations (MS001). The air and soil thermograph network has been reduced from the historical network of 37 sites originally established. Currently there are 10 measurement sites with two of these sites measuring relative humidity in addition to air and soil temperature. An original network of 19 sites (RS01-RS19) were established during the International Biome Program in the early 1970's. Emphasis on phenology, plant moisture stress, and leaf nutrient content led to extending this network of air and soil temperature measurement. A plant community classification system (Dyrness et al., 1971) was used as a primary means of stratification, and a set of permanent vegetation plots (Reference Stands) was installed to represent forest communities with distinct vegetation and hypothesized different environments (Dyrness et al., 1974). A thermograph network was installed within the reference stands in the early 1970's (Zobel et al., 1974), and vegetation standing crop, tree growth and mortality, and plant succession were also measured. The majority of these sites were established to monitor micro-meteorological data under the canopy. The purpose of this network was to provide air and soil temperature data for modeling photosynthesis, respiration, phenology, and decomposition, and to measure environmental gradients.

openCC (other)Aug 2025View details →
edi60/100

Soil Physical Data from the Shark River Slough, Everglades National Park (FCE), from November 2000 to January 2007

Soil pH, Eh and temperature readings are taken at SRS1b, SRS1c, SRS1d, SRS2 and SRS3. These measurements are taken only when the marsh is wet. Measurements are taken using an Orion model 250A meter, and the probes attached to the meter are the Orion Thermo pH probe and the Orion Eh probe. All readings are recorded in field notebooks, and then transferred into Microsoft Excel. The Eh reading is taken when the Eh probe is attached to the meter and the word "Ready" appears on the meter screen. The pH and temperature reading are taken when the pH probe is attached to the meter and the word "Ready" appears on the meter screen.

openCC (other)Dec 2025View details →
edi60/100

Soil Physical Data from the Taylor Slough, just outside Everglades National Park (FCE), from October 1998 to October 2006

Soil pH, Eh and temperature readings are taken at TS/Ph4 and TS/Ph5. These measurements are taken only when the marsh is wet. Measurements are taken using an Orion model 250A meter, and the probes attached to the meter are the Orion Thermo pH probe and the Orion Eh probe. All readings are recorded in field notebooks, and then transferred into Microsoft Excel. The Eh reading is taken when the Eh probe is attached to the meter and the word "Ready" appears on the meter screen. The pH and temperature reading are taken when the pH probe is attached to the meter and the word "Ready" appears on the meter screen.

openCC (other)Dec 2025View details →
edi60/100

Soil Physical Data from the Taylor Slough, within Everglades National Park (FCE), from September 1999 to November 2006

Soil pH, Eh and temperature readings are taken at TS/Ph1b,TS/Ph2,TS/Ph3 and TS/Ph6b. These measurements are taken only when the marsh is wet. Measurements are taken using an Orion model 250A meter, and the probes attached to the meter are the Orion Thermo pH probe and the Orion Eh probe. All readings are recorded in field notebooks, and then transferred into Microsoft Excel. The Eh reading is taken when the Eh probe is attached to the meter and the word "Ready" appears on the meter screen. The pH and temperature reading are taken when the pH probe is attached to the meter and the word "Ready" appears on the meter screen.

openCC (other)Dec 2025View details →
edi60/100

Soil Characteristic and Nutrient Data from the Taylor Slough, within Everglades National Park (FCE), from March 2002 to April 2004

Three random soil cores are collected once a year from TS/Ph 1b, 2, 3, 4, 5, & 6b. The collection of these soil cores is in the dry season (Dec.-May). The top 10cm of soil is collected using a soil core. The soil is then analyzed to obtain its bulk density, organic matter content, TC, TN, and TP.

openCC (other)Dec 2025View details →
edi60/100

Soil Characteristics and Nutrient Data from the Shark River Slough, within Everglades National Park (FCE), from March 2003 to March 2004

Three random soil cores are collected once a year from SRS1b, SRS2, and SRS3. The collection of these soil cores is in the dry season (Dec.-May). The top 10cm of soil is collected using a soil core. The soil is then analyzed to obtain its bulk density, organic matter content, TC, TN, and TP.

openCC (other)Dec 2025View details →
edi60/100

Soil volumetric water content calculated from neutron hydroprobe data at 15 NPP study locations at the Jornada Basin LTER site, 1989-ongoing

This data package contains soil water content data calculated from monthly neutron hydroprobe count measurements made at 15 net primary production (NPP) study locations on Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Once a month, neutron probe measurements are made at 10 depths (where possible) at each of 10 access tubes at each of the 15 NPP sites using a neutron probe (CPN Model 503DR Hydroprobe and CPN Model 503 Elite Hydroprobe). The raw dataset, also on EDI (knb-lter-jrn.210013001), consists of the count of thermalized neutrons at 30 cm depth intervals to a maximum depth of 300 cm. In this data package, the raw neutron counts have been adjusted for radioactive decay of the neutron source, then converted to volumetric water content (VWC) to a maximum depth of 270 cm using calibration equations (deepest probe depths are excluded from VWC calculations). The NPP sites these measurements are made at represent the 5 dominant vegetation types of the Jornada Basin, which consist of 3 shrub (creosotebush, mesquite dune, and tarbush) and 2 grass (upland grassland and playa) types. Three NPP sites are located in each of the types. This data collection is ongoing with new data collected monthly (updates to the EDI package may occur less frequently). NOTE: This version of the dataset includes calibrated data from a new hydroprobe unit that has recently been put into service. Repair parts were no longer available for the older unit.

openCC (other)Mar 2025View details →
edi60/100

Soil moisture, temperature, and electrical conductivity data from the black sand extended growing season length experiment, 2018 - 2024, hourly.

As a result of climate change, the Rocky Mountain Front Range is experiencing warmer summers and earlier snowmelt. Due to the importance of snow for regulating soil temperature, growing season length, and available moisture in alpine ecosystems, even small shifts in the snow-free period could have large impacts. The focus of the Growing Season Length Experiment is to examine how terrain-related differences in climate exposure influence the way alpine habitats respond to climate change via earlier snowmelt. To simulate how changes in growing season length may affect biotic and abiotic components, NWT LTER researchers established 5 experimental sites each containing a pair 10 x 40m rectangular plots. These blocks include north and south facing aspects, subalpine and alpine tundra meadows in a range of hydrological conditions (e.g. dry meadows, moist meadows, wet meadows). We accelerated snowmelt in one plot of each block by adding chemically inert black sand, while keeping the second plot as an unmanipulated control (black sand was added to these plots after snow had naturally melted). This dataset includes measurements of soil temperature, moisture, and electrical conductivity.

openCC (other)Jun 2025View details →
edi56/100

Soil Organic Matter Mechanisms of Stabilization (SOMMOS) - enhanced soil characterization data from 40 National Ecological Observatory Network (NEON) sites

Soil organic matter (SOM) is a critical linkage among many ecosystem services that sustain our society and life on Earth. It is the primary energy source for microbes and the principal storehouse of water necessary for plant growth. SOM also stores nutrients for plants and sorbs pollutants that otherwise could contaminate food and water supplies. Soils also help regulate climate by storing carbon that would otherwise be released to the atmosphere and contribute to climate change. The SOMMOS project investigated processes in the soil that protect SOM from being decomposed by microbes, processes that increase its sensitivity to environmental changes, and how changes in climate and land management influence the amount and stability of SOM. The project, which was a collaboration between scientists from the National Ecological Observatory Network (NEON), University of Colorado, University of Michigan, Oregon State University, Virginia Polytechnic Institute and State University, and the USDA-Forest Service, took advantage of soil samples collected across NEON, a major NSF investment in environmental monitoring that covers the entire United States. This continental-scale soil sample set was analyzed for a wide array of physical and chemical properties, well beyond those typically measured on such a large-scale sample set, including radiocarbon, extractable metals, organic matter chemistry by pyrolysis-GCMS, liquid extract fluorescence spectroscopy, and more. In addition to this dataset, archived samples are available from the project for sharing with interested researchers.

openCC (other)Dec 2021View details →
edi56/100

Soil and litter microclimate data from NEON and LTER Sites Across Eight U.S. Ecoregions (CliMush Project), 2022–2023

Data include soil and litter measurements for moisture, pH, and carbon-to-nitrogen ratio. Samples were collected from 8 different ecoregions, as determined by NEON, at various NEON/LTER and/or other experimental sites. Soil cores and litter samples were taken in the spring and fall of 2022.

openCC (other)Nov 2025View details →
edi56/100

Forest tree, woody debris, root ingrowth, soil respiration and characterization data from long-term research plots for LTREB at the University of Michigan Biological Station

The NSF-funded project "LTREB: Drivers of temperate forest carbon storage from canopy closure through successional time" (2014-2024) supports research to meet the following goals: 1) elucidate mechanisms responsible for changes in C storage over decades to centuries; 2) link processes leading to persistence and resilience of forest C storage following disturbance; 3) quantify the effects of potential drivers such as forest structure, N availability, climate change, and atmospheric deposition on decadal and longer-term trajectories of C storage. Field activities for this research are conducted at the University of Michigan Biological Station (UMBS) on a pair of chronosequences and several old reference forests. Synthesis activities utilize data collected from these field sites in support of the LTREB project, as well as data synthesized from other sources (e.g., long-term UMBS plot data, AmeriFlux data, FIA data) all intended to address the core questions of the LTREB project. This dataset has been compiled and expanded over a series of versions, with new data types and observations appended periodically. Presently, the dataset includes observations from tree inventory censuses, woody debris sampling, fine root ingrowth cores, soil respiration measurements, and two sets of soil collections aimed at quantifying a range of physical, chemical, and biological properties of soil.

openCC (other)Feb 2024View details →
edi56/100

Air temperature and humidity, and soil temperature data from the Arctic LTER Moist Non-acidic Tussock Experimental plots (MNT97), Toolik Lake Field Station, Alaska, 1999-2025.

In 1999, a Campbell CR10x data logger was installed in block 2 of the Arctic LTER Toolik Moist Non-acidic Tussock Experimental plots(MNT97). The plots are located on a hillside near Toolik Lake (68 38' N, 149 36'W). Air temperature and relative humidity were measured at 3 meters (control), and inside the greenhouse, and fertilized greenhouse. Soil temperatures were measured with thermocouples placed in control, fertilized, greenhouse, and fertilized-greenhouse plots.

openCC (other)Oct 2025View details →
edi56/100

Biogeochemistry data set for soil waters, streams, and lakes near Toolik Lake on the North Slope of Alaska, 2012 through 2020

Data file of the biogeochemistry of samples collected at various sites near Toolik Lake, North Slope of Alaska. Sample site descriptors include a unique assigned number (sortchem), site, date, time, depth, distance (downstream from a reference location), elevation, treatment, date-time, category, and water type (lake, surface, soil). Physical measures collected in the field include temperature (water, soil, well water), conductivity, pH, and average thaw depth in soil. Chemical analyses for the sample include alkalinity; dissolved inorganic and organic carbon (DIC and DOC); dissolved gases CO2 and CH4; inorganic and total dissolved nutrients (NH4, PO4, NO3, TDN, TDP); particulate carbon, nitrogen, and phosphorus (PC, PN, and PP); cations (Ca, Mg, Na, K, and Si); and anions (SO4 and Cl).

openCC (other)Mar 2022View details →
edi56/100

Soil-Adjusted Vegetation Index (SAVI) derived from 2019 National Agriculture Imagery Program (NAIP) data for the central Arizona region

This project calculates two vegetation indices—Normalized Difference Vegetation Index (NDVI) and Soil Adjusted Vegetation Index (SAVI) from the National Agriculture Imagery Program (NAIP) remotely sensed imagery. The intent is to make remotely sensed variables and visualizations accessible to stakeholders and researchers studying the Phoenix metropolitan area. NDVI and SAVI are calculated from the 2019 NAIP imagery (1m resolution). This dataset extends the 2010, 2013, 2015, and 2017 NDVI and SAVI products derived from NAIP imagery (also 1m resolution). All images are cropped to the CAP study area boundary.

openCC0May 2023View details →
edi56/100

Soil water content measurements and rainfall data for plots with experimentally altered precipitation and nutrient inputs at the Jornada Basin LTER site, 2011-ongoing

This dataset contains soil volumetric water content data collected starting in 2011 for a long-term precipitation and nutrient manipulation experiment at the Jornada Basin LTER site in southern New Mexico, U.S.A. This experiment uses precipitation shelters and irrigation treatments to manipulate water inputs, and fertilization treatments to alter nitrogen input to 2.5 x 2.5 meter plots in a desert grassland. Soil sensors are installed at surface and deep soil layers in each plot and collect hourly averages of volumetric water content using a time-domain reflectometry method. This dataset contains daily averages. This is an ongoing study and the dataset will be updated yearly.

openCC (other)Nov 2025View details →
edi56/100

Aggregated 30-minute soil water and temperature data from 9 NPP shrub sites at Jornada Basin LTER, 2013 - 2024 (for Pinos et al 2025 manuscript)

This is an aggregated dataset of 30-minute soil temperature and moisture data from 9 shrub-dominated NPP study sites at the Jornada Basin LTER site in southern New Mexico, U.S.A. Collection of soil volumetric water content data at all of the 15 Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content and soil temperature are measured every 30 minutes at an automated meteorological station installed at all 15 of the Jornada LTER program’s NPP sites. This dataset aggregates only the stations located at the 9 sites with shrub-dominated vegetation cover (creosotebush, tarbush, and mesquite dune sites). Measurements are made every 30 minutes at 10 cm, 20 cm, and 30 cm soil depths. This dataset is in support of the Pinos et al. 2025 manuscript.

openCC (other)Mar 2025View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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