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435 results for “Stream fish”

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edi52/100

Fish tag data remotely detected using whole stream antennas or hand held tag readers in the Kuparuk, Itkilik, and Sagavanirktok drainages near Toolik Field Station, Alaska, from 2010 to 2017

From 2009 to 2017, the FISHSCAPE Project (grant numbers 1719267, 1417754, and 0902153), based at Toolik Field Station, has monitored physical, chemical, and biological parameters within three watersheds: The Kuparuk (including Toolik Lake and Toolik outlet stream); The Sagavanirktok (primarily Oksrukuyik Creek, but also including sections of the Ailish and Atigun Rivers and the Galbraith Lakes); and The Itkillik (primarily the I-Minus outlet stream, a tributary that that feeds into the Itkilik River). Target species were primarily Arctic grayling and Lake trout, although Arctic char, Burbot, Dolly varden, round whitefish, and slimey sculpin were also captured. This file contains the detectioned fish tags using whole stream or hand-held antennas in the three watersheds. We had no field season in 2014 and thus did not deploy antennaes. Fish were tagged with Passive Integrated Transponder (PIT) tags which can be read with a whole stream antenna to track the migration of the fish, predominately Arctic grayling, throughout the systems. Fish tags detected with a handheld readers are designated in Site ID as "XXX_capture". For "capture" fish time is arbitraily set at '7:00:00'' of the day of capture and tagging because actual time was not recorded. The individual fish data (date, tag number, length, weight, species) associated with the tag can be found in the 2009-2017_FISHSCAPE_fish_tagging file.

openCC (other)Jan 2020View details →
edi52/100

Fish tagging data (length, weight, tag number) from the Kuparuk, the Sagavanirktok (primarily Oksrukuyik Creek) and the Itkillik (primarily the I-Minus outlet stream) watersheds, 2009 - 2017

Since 2009, the FISHSCAPE Project (grant number 1719267, 1417754, and 0902153), based at Toolik Field Station, has monitored physical, chemical, and biological parameters within three watersheds: The Kuparuk (including Toolik Lake and Toolik outlet stream); The Sagavanirktok (primarily Oksrukuyik Creek, but also including sections of the Ailish and Atigun Rivers and the Galbraith Lakes); and The Itkillik (primarily the I-Minus outlet stream, a tributary that that feeds into the Itkilik River). Target species were primarily Arctic grayling and Lake trout, although Arctic char, Burbot, Dolly varden, round whitefish, and slimey sculpin were also captured. Fish were collected on each river/lake. Coordinates and/or specific station locations were noted. All fish captured during the field season are measured, weighed, tagged (if large enough) and released. If fish were not previously tagged, they were tagged with Passive Integrated Transponder (PIT) tags which can be read with a whole stream antenna to track the migration of the fish, predminately Arctic grayling, throughout the systems.

openCC (other)Jan 2020View details →
edi48/100

Fish and crayfish density and count data for Peeks Creek, Macon County, NC, USA 2005-2014, 2019, and 2022 following a catastrophic debris flow, as well as six reference streams

We followed the process of recovery of the fish and crayfish assemblage in Peeks Creek, a high-gradient second order stream in the Little Tennessee River watershed of North Carolina, after a debris flow devastated the channel and its riparian zone. After 15 years, the fish assemblage had recovered, and the channel and riparian zone had stabilized. Of the three major components of the fish assemblage, Rainbow Trout (Oncorhynchus mykiss (Walbaum)), a strong swimmer, reappeared in year 1. Longnose Dace (Rhinichthys cataractae (Valenciennes in Cuvier and Valenciennes)) reappeared in year 3. Mottled Sculpin (Cottus bairdii Girard), a weak swimmer, did not become established until year 6 and only resumed expected abundance in year 9. Appalachian Brook Crayfish (Cambarus bartonii cavatus Hay) numbers recovered quickly, though only one individual was found the year following the debris flow. Unassisted natural recovery occurred after a costly engineered restoration project had been rejected and arguably represents the preferable solution. However, recovery of the fish assemblage may not have been achieved if the stream flowed directly into an impoundment or low gradient river that lacked the source of species for recolonization, or if the stream had been located above a barrier to upstream movement.

openCC (other)Jan 2025View details →
edi48/100

Riparian controls on light availability, primary producers, invertebrates, fish and salamanders in streams in and near the Andrews Experimental Forest, 2014-2018

The goal of this data collection effort was to determine how the age, stage, and structure of the riparian forest relates to stream primary producers and stream biota. Data were collected on stream habitat, benthic algal, biota (fish, salamanders and macroinvertebrates), and riparian forest cover across a total of 9 streams: 7 streams in the HJ Andrews basin/Lookout Creek stream network; one stream in the westward adjacent Blue River basin, and one stream in the eastward adjacent Deer Creek river basin. In each stream there were 2 study reaches – one bordered by old-growth riparian forest and the other bordered by regenerated second-growth riparian forest on at least one bank (with a stand ages that generally ranged between 30 and 60 years). In each study reach (80 – 150 m), we collected the following data: pool habitat, wetted and bankfull widths, large wood abundance and volume, riparian forest canopy cover, benthic algae accrual on tiles, stream macroinvertebrate abundances (from 6 replicate surber samplers, which were pooled and then sub-sampled, identified and measured), age 1+ cutthroat trout (Oncorhynchus clarkii clarkii) abundance and biomass, age 0+ (young-of-year) trout abundance and biomass, coastal giant salamander (Dicamptodon tenebrosus) abundance and biomass. Fish and salamander abundances were calculated by either mark-recapture or multiple pass depletion methods.

openCC (other)Jun 2019View details →
edi48/100

Effects of biotic (shrimp) and abiotic (discharge) factors on the depositional environment quantified in a montane stream in Puerto Rico. (Shrimp/Algae/Can J. Fish Aquat. Sci. (1994))

Effects of biotic (shrimp) and abiotic (discharge) factors on the depositional environment were quantified in a montane stream in Puerto Rico. Electricity was used experimentally to exclude large (approximately >1cm in length) biota without artificially increasing sedimentation as in cage enclosure/exclosure experiments in stream systems. Shrimp (>1cm in length) were excluded from substrata by semicircular fence hooked up to battery-powered fence chargers which emitted continuous pulses of electricity. Unelectrified control substrata had natural high densities of atyid shrimp. Significantly greater masses of total sediment, fine and large organic particles, and algal biovolume occurred in shrimp exclusion treatments relative to controls. Shrimp exclusion treatments experienced slow and steady accumulation of sediments under base flow conditions and a large stepwise increase in sediment following a storm. No measurable sediment accrued in the presence of natural densities of shrimp under base flow conditions. Shrimp rapidly removed sediments that accrued during the storm (440-620 g*m2 dry mass-1), decreasing sediment mass in control treatments to near prestorm levels (5-13 g*m2 dry mass-1) within 30 h. Atyid shrimp can significantly affect the accumulation of organic and inorganic materials on rock substrata in stream pools between high-discharge events. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.

openCC (other)Nov 2023View details →
edi44/100

A multi-scaled approach to evaluating the fish community structure within southern Appalachian streams, 2011

There is considerable uncertainty regarding the relative roles of stream habitat, landscape characteristics, and interspecific interactions in structuring stream fish assemblages. Thus, I evaluated the relative importance of environmental characteristics and species interactions, at local and landscape scales, on fish occupancy within the upper Little Tennessee River basin, Georgia, and North Carolina. Using a quadrat sample design, fishes were collected at 525 channel units among 48 study reaches during two consecutive years. I evaluated the relative support for the influence of local- and landscape-scale factors on fish occupancy using multi-scaled,hierarchical, multi-species occupancy models.

openCustomJan 2020View details →
edi44/100

Year 2001, 15 minute measurements of stage, water temperature, conductivity, dissolved oxygen, and pH in a small headwater stream draining a moderate sized, mixed land use (mainly forest) watershed, Fish Brook, Middleton, MA.

During 2001, continuous measurements, every 15 minutes, were made of stage, water temperature, conductivity, dissolved oxygen, and pH in a small headwater stream, Fish Brook, Boxford, MA, draining a moderate sized, mixed land use watershed. Measurements are for part of the ice free season (June – December). Discharge could not be determined due to inadequate rating curve. Several day gaps occur periodically due to removal for recalibration.

openCustomJan 2020View details →
edi44/100

Year 2002, 15 minute measurements of stage, water temperature, conductivity, dissolved oxygen, and pH in a small headwater stream draining a moderate sized, mixed land use (mainly forest) watershed, Fish Brook, Middleton, MA.

During 2002, continuous measurements, every 15 minutes, were made of stage, water temperature, conductivity, dissolved oxygen, and pH in a small headwater stream, Fish Brook, Boxford, MA, draining a moderate sized, mixed land use watershed. Measurements are for part of the ice free season (June – December). Discharge could not be determined due to inadequate rating curve and due to beaver activity. Several day gaps occur periodically due to removal for recalibration.

openCustomJan 2020View details →
zenodo40/100

Fig. 3 in Organization of fish assemblages in blackwater Atlantic Forest streams

Fig. 3. RDA ordination biplot of the first and second RDA axes based on fish density (ind.m-2) of 31 blackwater mesohabitats. Vector lines in bold type indicate the relationship of the environmental variables to the ordination axis; the line's length is proportional to its relative significance. For species codes, see Tab. 3.

opencc-by-4.0Apr 2019View details →
zenodo40/100

Fig. 2 in Organization of fish assemblages in blackwater Atlantic Forest streams

Fig. 2. Rarefaction curves calculated for each mesohabitat category (sand, leaf-litter and trunks), considering a total of 31 mesohabitats sampled in 13 blackwater streams of the alluvial plain of the Serra do Mar in the State of São Paulo. EstimateS 9.1 was used to plot species rarefaction curve (100 runs).

opencc-by-4.0Apr 2019View details →
zenodo40/100

Fig. 5 in Fish movement in an Atlantic Forest stream

Fig. 5. Relationship between distance (m) moved by fishes and seasons (dry and rainy) of all moving species from Ubatiba stream, Southeast, Brazil.

opencc-by-4.0Mar 2018View details →
zenodo40/100

Fig. 2 in Fish movement in an Atlantic Forest stream

Fig. 2. Schematic representation of the study area. Numbers were designated according to the distance of each stretch to the first stretch (0 m). Arrows indicate the water flow.

opencc-by-4.0Mar 2018View details →
zenodo40/100

Fig. 1. Ubatiba stream system showing all the four sampling sites. P1 in Fish movement in an Atlantic Forest stream

Fig. 1. Ubatiba stream system showing all the four sampling sites. P1 is the most upstream site and P4 is the most downstream site.

opencc-by-4.0Mar 2018View details →
zenodo40/100

Fig. 4 in From forests to cattail: how does the riparian zone influence stream fish?

Fig. 4. Biplot resulting from Nonmetric Multidimensional Scaling Analysis (NMDS) with presence and absence data showing ordination of sample units that represent each stream group: preserved (PRE, open circles), intermediate (INT, dark circles), and degraded sites (DEG, triangles). NMDS biplot exhibited stress value of 0.15 in 2-dimension, indicating good to potential useful interpretation (Clarke & Warwick, 2001).

opencc-by-4.0Dec 2012View details →
zenodo40/100

Fig. 5 in From forests to cattail: how does the riparian zone influence stream fish?

Fig. 5. Biplot of the Partial Redundancy Analysis (pRDA) on fish species composition (see abbreviations on Table 2) and abiotic variables relationships (arrows). Species with low abundance were not represented in the biplot following the option "orditorp r" in the package vegan of the software R 2.11.1.

opencc-by-4.0Dec 2012View details →
zenodo40/100

Fig. 3 in From forests to cattail: how does the riparian zone influence stream fish?

Fig. 3. Sample-based rarefaction curve (Obs) and richness estimation curves (Chao 1) by 50 randomizations against cumulative samples of the preserved (PRE), intermediate (INT), and degraded (DEG) sites.

opencc-by-4.0Dec 2012View details →
zenodo40/100

Fig. 2 in From forests to cattail: how does the riparian zone influence stream fish?

Fig. 2. Location of the preserved (PRE, open circles), intermediate (INT, dark circles), and degraded (DEG, triangles) sites in the northwestern portion of the state of São Paulo, Brazil.

opencc-by-4.0Dec 2012View details →
zenodo40/100

Fig. 1 in From forests to cattail: how does the riparian zone influence stream fish?

Fig. 1. Characteristic stages of the degradation process of riparian zones in a stream. a) streams with preserved riparian forests (PRE); b) with riparian forests in intermediate stage of degradation (INT); c) without riparian forests and in advanced stage of degradation (DEG).

opencc-by-4.0Dec 2012View details →
zenodo40/100

Fig. 3 in Distribution Patterns And Genetic Variability Of Three Stream-Dwelling Fish Species

Fig. 3. Principal Coordinates Analysis (PCoA) of the genetic and hydrographic distances of the sampled stocks (a, c, e: genetic distances; b, d, f: hydrographic distances)

opencc-by-4.0Sep 2008View details →
zenodo40/100

Fig. 2 in Distribution Patterns And Genetic Variability Of Three Stream-Dwelling Fish Species

Fig. 2. Canonical Correspondence Analysis (CCA) ordination diagram showing the effect of environmental factors on the relative abundances of studied species. The first axis explains 29.93% and

opencc-by-4.0Sep 2008View details →

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Allen Brain Atlas

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allen-brain-atlas
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Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

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behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record