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ShareScore release 0.9.0
Dataset results
2 results for “TCIA”
TCIA full and low dose CT images and volumetric normal pancreas segmentations
<p>This publicly available CT dataset was downloaded from 50 portal venous phase abdominal CT scans (3mm-slice thickness) performed in 50 patients with liver metastases— from The Cancer Imaging Archive (TCIA).These CT scans were acquired with routine radiation dose levels per standard clinical protocols on SOMATOM Definition Flash CT scanner (Siemens Healthcare, Forchheim, Germany).Each study had been postprocessed to include a second reconstructed CT dataset at a simulated 25% radiation dose level. The mean (standard deviation [SD]) radiation dose for the full dose and the reduced dose CT datasets were 14.7 mSv (8 mSv) and 3.7 mSv (2 mSv), respectively. After a curation process by radiologists, 9 of 50 cases were excluded [chronic calcific pancreatitis (n = 1), postsurgical changes in pancreas (n = 2) and pancreatic lesions (n = 6)]. Volumetric pancreas segmentations were done on all the remaining 41 cases [16 males and 25 females, mean (SD) patient age: 60.8 years (14.7 yrs)] independently by the two radiologists (R1 and R2). Segmentations were first done on the full dose CT dataset and then repeated on the reduced dose CT dataset by both R1 and R2 after a gap of at least 24 hours to allow for memory extinction.</p>
89 NSCLC patients with gene expression profiles and matching CT imaging data available at TCIA.
GEO Series GSE58661. Homo sapiens. 89 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.