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14
datasets available to search
ShareScore release 0.9.0
Dataset results
14 results for “TCRseq”
Peripheral blood TCRseq data in AIRR-C format for cancer patients who received either photon or proton based radiation therapy
<p>These are the AIRR-C format converted data from the original Adaptive ImmunoSEQ v2 data format.</p> <p>See the analysis repo for more information: <a href="https://github.com/JamieHeather/radiation-induced-lymphopenia-paper-analysis" target="_blank" rel="noopener">https://github.com/JamieHeather/radiation-induced-lymphopenia-paper-analysis</a>.</p>
Bulk TCRseq analysis on CD8+ T cells in wild type mice following anti-CD4 and anti-PDL1 mAb treatment
GEO Series GSE198208. Mus musculus. 107 samples. Type: Other.
RNAseq and TCRseq analysis of entinostat treated bladder tumors
GEO Series GSE153650. Mus musculus. 55 samples. Type: Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing.
Bulk TCRseq analysis on CD8+ T cells in FSCN1-KI bone marrow chimera mice following anti-CD4 and anti-PDL1 mAb treatment
GEO Series GSE198207. Mus musculus. 54 samples. Type: Other.
Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis [TCRseq]
GEO Series GSE106541. Homo sapiens. 110 samples. Type: Expression profiling by high throughput sequencing.
The PTPN2/N1 inhibitor ABBV-CLS-484 unleashes potent anti-tumour immunity [PTPN2i-MS-TCRseq]
GEO Series GSE237374. Mus musculus. 44 samples. Type: Other.
scRNAseq and TCRseq of hepatic and splenic CD8T cells from normal diet fed (ND), HFHC diet fed (HFHC), and resolution induced (RES) mice.
GEO Series GSE176210. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing; Other.
scRNAseq and TCRseq of tumor infiltrating CD8 T cells from samples
GEO Series GSE302214. Homo sapiens. 22 samples. Type: Other; Expression profiling by high throughput sequencing.
HTGTS-TCR-seq for profiling of mouse and human T-cell receptor α and β gene rearrangements and diversity [HTGTS-TCRseq]
GEO Series GSE297671. Homo sapiens; Mus musculus. 63 samples. Type: Other.
Anti-PD-L1 Lead-in Before MAPKi Combination Maximizes Anti-Tumor Efficacy and Immunity [TCRseq]
GEO Series GSE177900. Mus musculus. 29 samples. Type: Other.
Cell-intrinsic Tim-3 is Required for Optimal CD8 Response to Acute LCMV Infection [TCRseq]
GEO Series GSE300893. Mus musculus. 10 samples. Type: Other.
Immunogenomics of colorectal cancer response to immune checkpoint blockade: TCRseq
<p><strong>Immunogenomics of colorectal cancer response to immune checkpoint blockade</strong></p> <p>TCR-seq data supporting the paper: "Immunogenomics of colorectal cancer response to immune checkpoint blockade"</p> <p>Both files were downloaded from the Adaptive Biotechnologies immunoSeq Analyzer portal on 17/12/2019.</p> <ul> <li><strong>RearrangementDetails_12-17-2019_9-06-47_AM.tsv</strong>: contains the detailed productive rearrangement data for all 28 regions sequenced. For each region, data includes the nucleotide sequence, the amino acid sequence, the V, D, and J gene and allele identifications and the frequency of all the productive rearrangements in that region.</li> <li><strong>SampleOverview_12-17-2019_9-03-56_AM.tsv</strong>: contains the region-level data that includes absolute number of rearrangements and productive rearrangements and productive clonality for all 28 regions sequenced.</li> </ul>
TCRseq of Rpl18*-specific T cells from MC38 tumor and draining lymph node
GEO Series GSE302185. Mus musculus. 12 samples. Type: Other.
TCRseq for "Merkel cell polyomavirus-specific and CD39+CLA+ CD8 T cells as blood-based predictive biomarkers for PD-1 blockade in Merkel cell carcinoma"
<p>MCC bulk TCR seq data (fastq) from sorted CD8 T cell populations (from PBMC) and tumor.</p> <p>CD39neg: CD39– CD8 T cells</p> <p>CD39pos: CD39+CLA–CD103– CD8 T cells</p> <p>CLA: CD39+CLA+ CD8 T cells</p> <p>CD103: CD39+CLA–CD103+ CD8 T cells</p>
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.