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10
datasets available to search
ShareScore release 0.9.0
Dataset results
10 results for “TF analysis”
Bohdan-Khomtchouk/ENCODE_TF_geneXtendeR_analysis: ENCODE_TF_geneXtendeR_analysis
<p>geneXtendeR analysis on 547 ENCODE ChIP-seq datasets for both proximal and distal transcription factor (TF) binding peaks for all cell types used in <a href="https://bioconductor.org/packages/geneXtendeR/">https://bioconductor.org/packages/geneXtendeR/</a>.</p>
RNA-seq analysis of transcriptomic alterations in isogenic TF-1 leukemia cells harboring base-edited IDH mutations
GEO Series GSE238058. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (TF ChIP-seq)
GEO Series GSE69099. Mus musculus. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
IceQream: Quantitative chromosome accessibility analysis using physical TF models
GEO Series GSE305339. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Identification of genes regulated by the MADS transcription factor (TF), SEPALLATA3, in the context of the double sep1sep2 and triple sep1sep2sep3 mutant background, by RNA-Seq analysis
GEO Series GSE150605. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
Identification of genes regulated by the MADS transcription factor (TF), SEPALLATA3 spliced variant, SEP3.3 , in the context of the triple sep1 sep2 sep3 mutant background, by RNA-Seq analysis
GEO Series GSE226520. Arabidopsis thaliana. 3 samples. Type: Expression profiling by high throughput sequencing.
Analysis of TF binding sites and histone modification in IRF8-induced monocyte differentiation
GEO Series GSE38824. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Time-course transcriptome analysis of TF-induced iPSC neurons
GEO Series GSE224751. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Analysis of differentially expressed long noncoding RNAs, circular RNAs and the associated TF‐mRNA network in tongue squamous cell carcinoma
GEO Series GSE149008. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of control and miR-200a overexpressed TF-1 cells
GEO Series GSE75082. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.