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datasets available to search
ShareScore release 0.9.0
Dataset results
14 results for “Third-generation sequencing”
Fig. 10 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 10. Phylogenetic analysis of the isolated bacteria/viruses. Reference oligonucleotide sequences were selected by BLAST searches of the NCBI nt database. (A) Subtrees of the experimental sequences from the Borrelia burgdorferi 16S rRNA gene. (B) Subtrees of the experimental sequences from the Coxiella burnetii 16S rRNA gene. (C) Subtrees of the experimental sequences from the Anaplasma phagocytophilum MSP4 gene. (D) Subtrees of the experimental sequences from the Simian foamy virus pathogen. (E) Subtrees of the experimental sequences from the Crimean-Congo haemorrhagic fever orthonairovirus segment-S gene.
Fig. 7 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 7. Population distribution of micropathogens in different samples. Note: "%" represents the proportion of micropathogen in the total community from each sample.
Fig. 3 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 3. Venn diagram based on the eggNOG database. Note: The corresponding functional categories and non-supervised orthologous group (NOG) numbers were obtained from the eggNOG database.
Fig. 5 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 5. Heat maps of community composition based on genera. Note: X-axis, template name; Y-axis, genus. The darker the blue colour is, the higher the enrichment of the genus in the sample.
Fig. 2 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 2. Summary of the tag length distribution following the sequencing of genes from the four samples.
Fig. 9 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 9. Pie chart of the distribution of viral abundances in different samples. Note: "%" represents the proportion of the virus in the total community from each sample, and the different colours represent different viruses. A: The primary micropathogens analysed in G1. B: The primary micropathogens analysed in G2. C: The main micropathogens analysed in G3. D: The main micropathogens analysed in G4.
Fig. 4 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 4. Venn diagram based on the KEGG Orthology database. Note: DIAMOND was used to compare gene sequences with the KEGG database, and the corresponding metabolic pathway information and KEGG orthology results of the genes were obtained from the KEGG database.
Fig. 1 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 1. The genomic DNA library was generated according to the PacBio Sequel sample preparation instructions.
Fig. 6 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 6. Bar chart of the relative abundances of genera.
Fig. 8 in Micropathogen community identification in ticks (Acari: Ixodidae) using third-generation sequencing
Fig. 8. Bar chart of the relative abundances of bacteria.
Comprehensive Assessment of Isoform Detection Methods for Third-Generation Sequencing Data
GEO Series GSE227911. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
High-throughput and high-sensitivity full-length single-cell RNA-seq analysis on third-generation sequencing platform
GEO Series GSE203561. Homo sapiens; Mus. 8 samples. Type: Expression profiling by high throughput sequencing.
Third-generation long-read whole-genome sequencing of Dux knockout mouse
GEO Series GSE134830. Mus musculus. 1 samples. Type: Other.
Alternative cleavage and polyadenylation analysis in an isoform-resolved way by Second- and Third-Generation Sequencing technologies
GEO Series GSE97688. Homo sapiens. 2 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.