Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
49
datasets available to search
ShareScore release 0.9.0
Dataset results
49 results for “Troglocaris”
Linked collectors and determiners for: Troglocaris (Xiphocaridinella) kumistavi sp. nov., a new species of stygobiotic atyid shrimp (Crustacea: Decapoda: Atyidae) from Kumistavi Cave, Imereti, Western Georgia, Caucasus.
Natural history specimen data linked to collectors and determiners held within, "Troglocaris (Xiphocaridinella) kumistavi sp. nov., a new species of stygobiotic atyid shrimp (Crustacea: Decapoda: Atyidae) from Kumistavi Cave, Imereti, Western Georgia, Caucasus". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/3e1c4420-b287-4848-8b81-c9524d3fb5d9">https://bionomia.net/dataset/3e1c4420-b287-4848-8b81-c9524d3fb5d9</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/3e1c4420-b287-4848-8b81-c9524d3fb5d9">https://gbif.org/dataset/3e1c4420-b287-4848-8b81-c9524d3fb5d9</a>. Formatted as a Frictionless Data package.
Figure 15 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 15. Distribution of endemic atyids in southern Europe and the surrounding neighbourhood. Details of the subgenera Troglocaris, Spelaeocaris, and Troglocaridella, are given in Figures 13 and 14.
Figure 13 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 13. Distribution and differerenciation of the subgenus Troglocaris (Troglocaris) Dormitzer, 1853. Solid symbols represent the localities of the sequenced samples. Type localities of species and races: KOM, Kompoljska jama, for Troglocaris (Troglocaris) anophthalmus anophthalmus; MIK, Mikašinovića pećina, for Troglocaris anophthalmus intermedia; PLA, Planinska jama, for Troglocaris planinensis; SUV, Suvaja pećina, for Troglocaris (Troglocaris) bosnica sp. nov.; VJE, Vjetrenica, for Troglocaris (Troglocaris) anophthalmus – Adriatic clade. Dotted lines indicate the supposed smallest possible areas of the named taxa and the Adriatic clade.
Figure 14 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 14. Distribution and differerenciation of the subgenera Troglocaris (Spelaeocaris) and Troglocaris (Troglocaridella) (insert). Solid symbols represent the localities of the sequenced samples. Type localities of species: HER, Vjetrenica, for Troglocaris (Troglocaridella) hercegovinensis; KAP, Obajdinova pećina, for Troglocaris (Spelaeocaris) kapelana sp. nov.; NEG, Karišnica, for Troglocaris (Spelaeocaris) neglecta sp. nov.; PRA, Obod for Troglocaris (Spelaeocaris) prasence sp. nov.; PRE, Dejanova pećina, for Troglocaris (Spelaeocaris) pretneri; sp, Suvaja for T. (Spelaeocaris) sp. Dotted lines indicate the supposed smallest possible areas of the named taxa.
Figure 8 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 8. Troglocaris (Troglocaris) bosnica sp. nov., holotype male. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sD for mx, pp; sE for plp.
Figure 11 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 11. Spra, Troglocaris (Spelaeocaris) prasence sp. nov., holotype male from Obod cave. Sne, Troglocaris (Spelaeocaris) neglecta sp. nov., holotype male from Karišnica. Ska, Troglocaris (Spelaeocaris) kapelana sp. nov., holotype male from Obajdinova pećina. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sE for all.
Figure 12 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 12. Troglocaris (Spelaeocaris) neglecta sp. nov., holotype male from Karišnica. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sA for complete pp; sB for cp; sD for t; sE for mx, mxp.
Figure 10 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 10. Troglocaris (Spelaeocaris) prasence sp. nov., holotype male from Obod cave. fSp, female from the same cave. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sD for all.
Figure 2 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 2. Endopodites of male pleopods I: Dv, Dugastella valentina from Mijares River; Gi, three aspects of Gallocaris inermis from Grotte de Cambous; Th, Troglocaris (Troglocaridella) hercegovinensis from Vjetrenica; Sp, Troglocaris (Spelaeocaris) pretneri from Dejanova pećina;?Sp, T. (S.) cf. pretneri from Ljelješnica. Scale bars: see Fig. 4; sE for Sp, Th, iTh; sG for Dv, Gi.
Figure 5 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 5. Distal articles of pereopods III and V, and maxilliped I. Dv, Dugastella valentina, male from Mijares river; Gi, Gallocaris inermis, male from Grotte de Cambous; Th, Troglocaris (Troglocaridella) hercegovinensis, male from Vjetrenica; fTh, T. (T.) hercegovinensis, female from Vjetrenica. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sD for mx and mxp; sG for pp of Gi and fTh; sH for other pp.
Figure 9 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 9. Troglocaris (Spelaeocaris) prasence sp. nov., holotype male from Obod cave. fSpra, female from Obodska pećina. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sA for cp; sB for fcp; sC for all a, t.
Figure 7 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 7. Troglocaris (Troglocaris) bosnica sp. nov. holotype and paratype males. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sA for all complete pp; sB for cp; sC for both a, t, up; sD for mx, mxp, distal parts of pp.
Figure 1 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 1. Maximum-likelihood tree of the putative genus Troglocaris based on cytochrome oxidase subunit I (COI) + 16S rDNA sequences reconstructed under the GTR+I+G model of evolution. Numbers next to nodes represent bootstrap values of main splits, as percentages. Populations are named by locality names; 'T' indicates the type locality of a taxon. New taxonomic positions are indicated on the right. Atyaephyra and Typhlatya are used as the outgroups.
Figure 4 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 4. Endopodite appendices of male pleopods II: Dv, Dugastella valentina from Mijares river; Gi, Gallocaris inermis from Grotte de Cambous; Th, Troglocaris (Troglocaridella) hercegovinensis (jTh, immature male) from Vjetrenica; Sp, Troglocaris (Spelaeocaris) pretneri from Dejanova pećina; Ta, Troglocaris (Troglocaris) anophthalmus from Kompoljska jama, CL 7 mm; jTa, an immature male T. (T.) anophthalmus, CL 6.4 mm. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sA-sH scale bars; sE for Sp, Ta, jTa; sG for Dv, Th; sH for Gi, jTh.
Figure 3 in European cave shrimp species (Decapoda: Caridea: Atyidae), redefined after a phylogenetic study; redefinition of some taxa, a new genus and four new Troglocaris species
Figure 3. Endopodites of male pleopods I: Ta, Troglocaris (Troglocaris) anophthalmus from Kompoljska jama, in normal and flattened states; Ta-V, T. (T.) anophthalmus from Vjetrenica. See the Appendix for a list of abbreviations. Scale bars: see Fig. 4: sE for upper images; sG for lower left; sH for lower right.
FIGURE 6. Male pleopod II in Development of sexual characters in the cave shrimp genus Troglocaris (Crustacea: Decapoda: Atyidae) and their applicability in taxonomy
FIGURE 6. Male pleopod II (plpII) appendices and pereopod III (ppIII) distal articles in T. (S.) prasence (Spra), T. (S.) kapelana (Ska), juvenile (jSne) and presumably adult (Sne) T. (S.) neglecta. While the maturity of T. (S.) prasence male is ascertained, for the males of T. (S.) neglecta and T. (S.) kapelana (full) maturity cannot be ascertained due to deficient number of specimens. Carapace length (in mm): jSne, 5.7; Sne, 6.3; Ska, 8.5; Spra, 7.7.
FIGURE 5 in Development of sexual characters in the cave shrimp genus Troglocaris (Crustacea: Decapoda: Atyidae) and their applicability in taxonomy
FIGURE 5. Endopodite of first pleopod in (a) juvenile (carapace length: 5.1 mm), (b) adult non-ovigerous (carapace length: 7.4 mm) and (c) ovigerous females (carapace length: 7.3 mm) in Troglocaris s. str. In ovigerous females, number and length of setae on protopodite, as well as on endo- and exopodite, are highly increased. Ai: to infer from its position, the distal extension should be appendix interna, which could be only elongated (c) or curved (b).
FIGURE 1 in Development of sexual characters in the cave shrimp genus Troglocaris (Crustacea: Decapoda: Atyidae) and their applicability in taxonomy
FIGURE 1. Two-dimensional plot generated from Principal Component Analysis (PCA) run on 49 specimens of Troglocaris s. str. from W-SloKaċna sample. In 43 males of different size (age) and 6 specimens of uncertain sex, 13 ratios are considered. Explanation of group abbreviations: U – juveniles of uncertain sex (i.e. without appendix masculina, sex is not identifiable); A – juvenile males with weakly developed appendix masculina; B – adult males (appendix masculina well developed, see also Figure 4). List of ratios is in Appendix C (under P).
FIGURE 3 in Development of sexual characters in the cave shrimp genus Troglocaris (Crustacea: Decapoda: Atyidae) and their applicability in taxonomy
FIGURE 3. Scatter dot plots of the untransformed characters from the two ratios (pr3tp – length of group of spiniform setae on widened distal part of pereopod III article 6 vs. length of article 6; and pl2amen – appendix masculina length vs. endopodite length, both on pleopod II), recognized as the most important for the separation of three age groups in Troglocaris s. str.
FIGURE 2 in Development of sexual characters in the cave shrimp genus Troglocaris (Crustacea: Decapoda: Atyidae) and their applicability in taxonomy
FIGURE 2. Two-dimensional plots generated from (a) DFA 1 run on 49 age-grouped specimens from W-SloKaċna with 141 age-ungrouped Troglocaris s. str. males from 6 phylogroups, considering 4 ratios (pr3tp, p3d, pl1enex, pl2amen); (b) DFA 2 run on 190 age-grouped Troglocaris s. str. specimens, considering 6 ratios (pr3p, pr3tp, p3d, pl2amen, pl2aien, pl2amai). In DFA 2, all specimens are graphically denoted by phylogroups. Explanation for characters' abbreviations is in Appendix C. U – juveniles of uncertain sex (i.e. without appendix masculina, sex is not identifiable); A – juvenile males with weakly developed appendix masculina; B – adult males (appendix masculina well developed, see also Figure 4).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.