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Fig. 5 in First report of Schistosoma sinensium infecting Tupaia belangeri and Tricula sp. LF

Fig. 5. Molecular phylogenetic analyses of the Tricula sp. LF (◆) by the maximum likelihood method (ML) and maximum parsimony method (MP). Phylogenetic tree depicting relationships among Tricula species inferred from: A. 28S nucleotide data analyses using ML (Ai) and MP (Aii). [Tricula ludongbini AY207037.1, Tricula bambooensis AY207036.1, Tricula xiaolongmenensis AY207040.1, Neotricula aperta AY207034.1 and Delavaya dianchiensis AY207038.1 were cited from Attwood et al. (2004); Gammatricula shini AB611797.1 was cited from Kameda and Kato (2011)]. Outgroup taxon Potamopyrgus antipodarum-JF960454.1. B. 16S nucleotide data analyses using ML (Bi) and MP (Bii). [Tricula ludongbini AY207031.1, Tricula bambooensis AY207030.1, Delavaya dianchiensis AY207033.1 and Tricula xiaolongmenensis AY207032.1 were cited from Attwood et al. (2004); Tricula hudiequanensis KC832712.1 and Jinghongia jinghongensis KC832728.1 were cited from Liu et al. (2014); Neotricula aperta EU306250.1 was cited from Attwood et al. (2008); Gammatricula shini AB611798.1 was cited from Kameda and Kato (2011)]. Outgroup taxon Potamopyrgus antipodarum-AY314009.1. Other sequences were from GenBank.

Fig. 4 in First report of Schistosoma sinensium infecting Tupaia belangeri and Tricula sp. LF

Fig. 4. Shell morphology of Tricula sp. LF. A. Shape. B–C. Scanning electron micrograph of the radula.

Fig. 3 in First report of Schistosoma sinensium infecting Tupaia belangeri and Tricula sp. LF

Fig. 3. Molecular phylogenetic analyses of the present Schistosoma sinensium (◆) by the maximum likelihood method (ML) and maximum parsimony method (MP). Phylogenetic tree depicting relationships among Schistosoma species inferred from: A. 18S nucleotide data analyses using ML (Ai) and MP (Aii). [Schistosoma malayensis AY157227.1, Schistosoma mekongi AY157228.1, Schistosoma sinensium AY157225.1, Schistosoma indicum AY157231.1 and Schistosoma japonicum AY157226.1 were cited from Lockyer et al. (2003); Schistosoma incognitum JQ408706.1 was cited from Webster and Littlewood (2012); Schistosoma.spindale Z11979.1 was cited from Johnston et al. (1993)]. B. CO1 nucleotide data analyses using ML (Bi) and MP (Bii). [Schistosoma malayensis AY157198.1, Schistosoma mekongi AY157199.1, Schistosoma sinensium AY157197.1 and Schistosoma incognitum AY157201.1 were cited from Lockyer et al. (2003); Schistosoma indicum NC_047240.1 was cited from Jones et al. (2020); Schistosoma nasale KR607232.1 was cited from Devkota et al. (2015)]. C.12S nucleotide data analyses using ML (Ci) and MP (Cii). [Schistosoma mekongi AF217449.1 was cited from Le et al. (2000); Schistosoma sinensium AF465918.1 and Schistosoma ovuncatum AF465917.1 were cited from Attwood et al. (2002a); Schistosoma incognitum EF534279.1 was cited from Attwood et al. (2007); Schistosoma nasale KR607261.1 was cited from Devkota et al. (2015); Schistosoma mansoni MN593407.1 was cited from Catalano et al. (2020); Schistosoma indicum NC_047240.1 and Schistosoma spindale MN637820.1 were cited from Jones et al. (2020)]. Other sequences were from GenBank.

Fig. 2. Enlarged worm picture. A in First report of Schistosoma sinensium infecting Tupaia belangeri and Tricula sp. LF

Fig. 2. Enlarged worm picture. A. Male, showing oral sucker (os), ventral sucker (vs), constriction (pac), testes (te), gut caeca (int) and gynecophoral canal (gyn). B. Female, showing oral sucker (os), ventral sucker (vs), utero (ut), ovary(ov), vitellarium (vg) and gut caeca (int).

Fig. 1 in First report of Schistosoma sinensium infecting Tupaia belangeri and Tricula sp. LF

Fig. 1. Morphology of S. sinensium at different life cycle stages. Miracidia and cercariae were stained with iodine. A. Egg. B. Miracidium. C. Cercaria. D. Male and female adult worms.

Fig. 5 in Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

Fig. 5. Phylogenetic tree based on analysis of mitochondrial COI sequences of the Sarcocystidae including the new Sarcocystis sp. examined in this study (black symbols). Other taxa of the Apicomplexa served as root. Evolutionary history was inferred by the Maximum Likelihood (ML) method based on the TamuraNei model, whereby 619 positions were included in the final data set. All positions with less than 95% site coverage were eliminated; that is, fewer than 5% alignment gaps, missing data, and ambiguous bases were allowed at any position. Bootstrap percentages (1000 iterations) are shown next to branches. COI sequences E357-13 and E120-13 (not shown in the tree) are available at GenBank (MN732561 and MN732562, respectively).

Fig. 2 in Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

Fig. 2. Ultrastructure of S. scandentiborneensis sp. nov. Note, due to ethanol-fixation some ultrastructural details are poorly resolved (e.g. membranes). A) Longitudinal section through the same sample as in Fig. 1C, showing a gross view of the sarcocyst and its villous protrusions (VP) that are sectioned in different orientations. The inset shows a cross section through various VP that reveals the arrangement of microtubules in their inner core; while in this case 16 microtubules are visible (asterisks), sections through more apical portions of the VP showed lower numbers. B) Longitudinal section through the fingerlike VPs that appear to be anchored in the ground substance (arrow) by microtubules (asterisks) that extend into each protrusion; note the electron-dense, U-shaped structure at each tip of the protrusions (arrowheads) and the apparently serrated surface of the VP (flat arrowheads). The inset shows a higher magnification of the apical part of a single VP with the typical U-shaped apex (asterisk), which appears to be connected with the host cell through an electronlucent contact zone (white arrowheads); interestingly, the protrusion appears fenestrated (also visible in the main image) possessing thorn-like structures (black arrows; the white arrow indicates a crosssectional view) that could be responsible for the serration visible at lower magnification. CZ, cystozoites; HC, host cell; VP, villous protrusion.

Fig. 1 in Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

Fig. 1. Light microscopy of Sarcocystis scandentiborneensis sp. nov. A and B, Haematoxylin & Eosinstained histological sections of striated musculature; C and D, Richardson's dye-stained 1.0 μm thin sections of sarcocysts. A) Tissue section of laryngeal muscle with various sarcocysts in cross section (asterisks), indicating a relatively high density of cysts in this part of musculature. B) Longitudinal section through a sarcocyst, showing a cigar-shaped appearance; however, isolated native sarcocysts, which were not available, may look different. C) Part of a longitudinal section through the tip of a sarcocyst, note the very thin ground substance (arrows) and the fine septae extending into the interior of the cyst (arrowheads); cystozoites (CZ) were loosely scattered within chambers while metrocytes were rarely seen, indicating maturity of the cyst; bars indicate the variable thickness of the cyst wall: the wall was thinner in regions where the villous protrusions were bent (right bar); note that the intense staining at the interface between host cell (HC) and parasite is part of the host cell. D) Cross-section through a sarcocyst showing cystozoites and the cyst wall (bar) including its thin ground substance (arrows).

Fig. 4 in Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

Fig. 4. Mapping (to the Toxoplasma gondii reference molecule M97703) of frequencies (%) of base pair changes observed in sequence comparisons of nu clear 18S rDNA within the new Sarcocystis sp. from treeshrews (intraspecific variation: isolates E364–13 versus E357–13) and between the new species and Sarcocystis zuoi and/or S. clethrionomyelaphis (interspecific variation: E364–13 versus S. zuoi/clethrionomyelaphis). Results were combined for the two latter species to simplify the graph. Here, 87.2% of 2118 alignment positions showed moderate to high levels of consistency, while sections of ambiguous alignment did not relate to the species under investigation. Due to gaps in the alignment, not all of the observed nt changes could be mapped to a homologous position of the reference molecule (i.e., 7 out of 24 bp changes in intraspecific comparison; 33 out of 74 bp changes in interspecific comparison), in which case the position of each nt relative to the helix was inferred from neighboring nt for which such position was known. Gaps were mainly due to insertions in helices V2, V4, and V9 rendering E357-13/E364-13 longer than the sequence of T. gondii. The percentage of parsimony-informative (pi) bp changes per helix is shown for helices V1, V2, V4, V7, and V9 above each column. Also shown is the ratio of transitions versus transversions (Ti/Tv) for selected helices.

opencc-byAug 2017View details →

zenodo36/100

Tupaia [16411]

more info at; https://collection.tairawhitimuseum.org.nz/objects/16411/tupaia Designed and made by Jo Torr. Long jacket in 1770s style, 'Mandarin' collar. Machine embroidery references Captain James Cook's Pacific travels, Joseph Banks, the Tahitian Tupaia, and a Māori. Garment is made of used decorated Tongan tapa cloth and is fully lined with calico. Maker's professional label is sewn into the inside of the collar. 10 embroidered tapa-covered-buttons down the proper left front edge, no buttonholes on the proprer right front edge. Four inverted pleats across the back, an embroidered button above each. Sleeves have wide cuffs, each has three embroidered buttons. Two pockets: embroidered flaps and lined with calico. Source: Objaverse 1.0 / Sketchfab

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Fig. 3 in Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

Fig. 3. Phylogenetic tree of nuclear 18S rDNA sequences of the Sarcocystidae, including the new Sarcocystis sp. from treeshrews (black symbols). Taxa of the Eimeriidae served as outgroup. Bayesian Inference was used for phylogeny reconstruction, whereby the general time-reversible substitution model (GTR + G + I) combined with an assumed among-site variation ('covariotide' model) was applied. Values for posterior probability are indicated behind nodes. Note that the new species is part of a monophyletic subclade previously tagged S1 (Wassermann et al., 2017), which includes taxa known to prefer snakes as definitive and rodents as intermediate hosts. Sequences E357-13 and E364-13 are available at GenBank under MN733816 and MN733817, respectively.

openGEO-OpenJan 2013View details →

geo20/100

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

GEO Series GSE39150. Tupaia chinensis. 7 samples. Type: Expression profiling by high throughput sequencing.

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Identification of Driver Mutations for Induction of Pancreatic Cancer from Adult Tree Shrew (Tupaia belangeri chinensis) Acinar Cells

GEO Series GSE106343. Tupaia chinensis. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2018View details →

opennotspecifiedMay 2019View details →

Figure 5. Caridina tupaia n in Revision of freshwater shrimps belonging to Caridina weberi complex (Crustacea: Decapoda: Atyidae) from Polynesia with discussion on their biogeography

Figure 5. Caridina tupaia n. sp. Holotype (MNHN-IU-2018-260; DNA: CA2058), (a). first pereiopod; (b). second pereiopod; (c). third pereiopod; (d). fifth pereiopod; e. dactylus of fifth pereiopod; (f). dactylus of third pereiopod; (g). cephalothorax; h. preanal carina; (j). uropodal diaeresis; (k). telson. Paratype (MNHN-IU-2018-268), (i). eggs. Paratype (MNHN-IU-2018-261; DNA: CA1048), (l). first pleopod; m. second pleopod.

opennotspecifiedJul 2018View details →

On following pages: 4. Northern Treeshrew (Tupaia belangeri); 5. Lesser Treeshrew (Tupaia minon; 6. Common Treeshrew (Tupaia glis); 7. Nicobar Treeshrew (Tupaia nicobarica); 8. Sumatran Treeshrew (Tupaia ferruginea); 9. Golden-bellied Treeshrew (Tupaia chrysogasten:; 10. Banka Island Treeshrew (Tupaia discolon; 11. Horsfield's Treeshrew (Tupaia javanica); 12. Javan Treeshrew (Tupaia hypochrysa); 13. Large Treeshrew (Tupaia tana); 14. Long-footed Treeshrew (Tupaia longipes); 15. Slender Treeshrew (Tupaia gracilis); 16. Mountain Treeshrew (Tupaia montana); 17. Striped Treeshrew (Tupaia dorsalis); 18. Painted Treeshrew (Tupaia picta); 19. Kalimantan Treeshrew (Tupaia salatana); 20. Splendid Treeshrew (Tupaia splendidula); 21. Mindanao Treeshrew (Tupaia everett), 22. Palawan Treeshrew (Tupaia palawanensis). in Tupaiidae

On following pages: 4. Northern Treeshrew (Tupaia belangeri); 5. Lesser Treeshrew (Tupaia minon; 6. Common Treeshrew (Tupaia glis); 7. Nicobar Treeshrew (Tupaia nicobarica); 8. Sumatran Treeshrew (Tupaia ferruginea); 9. Golden-bellied Treeshrew (Tupaia chrysogasten:; 10. Banka Island Treeshrew (Tupaia discolon; 11. Horsfield's Treeshrew (Tupaia javanica); 12. Javan Treeshrew (Tupaia hypochrysa); 13. Large Treeshrew (Tupaia tana); 14. Long-footed Treeshrew (Tupaia longipes); 15. Slender Treeshrew (Tupaia gracilis); 16. Mountain Treeshrew (Tupaia montana); 17. Striped Treeshrew (Tupaia dorsalis); 18. Painted Treeshrew (Tupaia picta); 19. Kalimantan Treeshrew (Tupaia salatana); 20. Splendid Treeshrew (Tupaia splendidula); 21. Mindanao Treeshrew (Tupaia everett), 22. Palawan Treeshrew (Tupaia palawanensis).

opencc-by-nc-1.0Oct 2019View details →

Tree shrew (Tupaia) skull BIRUG 18617

BIRUG 18617 is the skull of a modern tree shrew (*Tupaia*). Despite its name, this animal is not closely related to shrews – instead it is among the closest living relatives of primates. The tree shrew is found in many parts of Asia, including, India, Burma, the Nicobar Islands, the Philippines, China, Java, Borneo and Sumatra, living in the undergrowth of tropical forests. Again, despite its name, the majority of tree shrew species actually forage on the forest floor. As indicated by their strong and sharply cusped cheek-teeth, tree shrews are primarily insectivores, though also eat the pulp of soft fruits. This specimen forms part of the Museum's Humphreys Collection – a historical collection of Quaternary animal skulls and teeth amassed by H. F. Humphreys for use in the University's dental school. This specimen was digitised by Andrew Jones using an Artec Spider 3D scanner. Source: Objaverse 1.0 / Sketchfab

Nördliches Spitzhörnchen (Tupaia belangeri)

Source: Flickr 4DCity URL: <a href="https://4dcity.org/imgupload/1661456410.9241.jpg">https://4dcity.org/imgupload/1661456410.9241.jpg</a> Original Image URL: <a href="https://live.staticflickr.com/65535/52297087578_c0e80ea4a9_m.jpg">https://live.staticflickr.com/65535/52297087578_c0e80ea4a9_m.jpg</a> Image-Metadata: Filename: 1661456410.9241.jpg Image Dimensions: 240x160 Megapixels: 0.04 MP Filesize: 22.79 KB Copyright: Tom's Fotokiste ExifOffset: 94 Artist: Thomas Maaßen [stripped personal information]

Nördliches Spitzhörnchen (Tupaia belangeri)

Source: Flickr 4DCity URL: <a href="https://4dcity.org/imgupload/1661456410.5262.jpg">https://4dcity.org/imgupload/1661456410.5262.jpg</a> Original Image URL: <a href="https://live.staticflickr.com/65535/52297091163_7654e07685_m.jpg">https://live.staticflickr.com/65535/52297091163_7654e07685_m.jpg</a> Image-Metadata: Filename: 1661456410.5262.jpg Image Dimensions: 240x160 Megapixels: 0.04 MP Filesize: 22.81 KB Copyright: Tom's Fotokiste ExifOffset: 94 Artist: Thomas Maaßen [stripped personal information]

Nördliches Spitzhörnchen (Tupaia belangeri)

Source: Flickr 4DCity URL: <a href="https://4dcity.org/imgupload/1661456410.3908.jpg">https://4dcity.org/imgupload/1661456410.3908.jpg</a> Original Image URL: <a href="https://live.staticflickr.com/65535/52297351459_6e22062049_m.jpg">https://live.staticflickr.com/65535/52297351459_6e22062049_m.jpg</a> Image-Metadata: Filename: 1661456410.3908.jpg Image Dimensions: 240x160 Megapixels: 0.04 MP Filesize: 22.88 KB Copyright: Tom's Fotokiste ExifOffset: 94 Artist: Thomas Maaßen [stripped personal information]

Nördliches Spitzhörnchen (Tupaia belangeri)

Source: Flickr 4DCity URL: <a href="https://4dcity.org/imgupload/1661456375.9511.jpg">https://4dcity.org/imgupload/1661456375.9511.jpg</a> Original Image URL: <a href="https://live.staticflickr.com/65535/52297348299_ce968a6ba0_m.jpg">https://live.staticflickr.com/65535/52297348299_ce968a6ba0_m.jpg</a> Image-Metadata: Filename: 1661456375.9511.jpg Image Dimensions: 240x160 Megapixels: 0.04 MP Filesize: 22.19 KB Copyright: Tom's Fotokiste ExifOffset: 94 Artist: Thomas Maaßen [stripped personal information]