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11 results for “Verticillium dahliae”
Annotated VCF of 192 Verticillium dahliae isolates
<p><span></span></p> <p><em>Verticillium dahliae</em> is an important soil-borne pathogen causing Verticillium wilt. It is also the primary causal agent of the Potato Early Dying, a disease complex involving the root-lesion nematode. Here, we report the whole-genome sequencing of 192 isolates of <em>V. dahliae</em> originating from the major potato production areas across Canada. Our results yielded a resource of <span> 277,010 genetic variations</span> that will be useful for genetic analyses and revealed the presence of two major lineages, both present in all provinces but exhibiting differences in regional prevalence.</p>
Annotated VCF of 192 Verticillium dahliae isolates
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Transcriptome sequencing of Verticillium dahliae and △VdBre1 mutant
GEO Series GSE151401. Verticillium dahliae. 6 samples. Type: Expression profiling by high throughput sequencing.
Verticillium dahliae-Arabidopsis interaction causes changes in gene expression profiles and jasmonate levels on different time scales
GEO Series GSE104590. Arabidopsis thaliana; Verticillium dahliae. 9 samples. Type: Expression profiling by high throughput sequencing.
RNA-Sequencing, Physiological and RNAi Analyses Provide Insights into the Response Mechanism of the ABC-Mediated Resistance to Verticillium Dahliae Infection In cotton
GEO Series GSE123175. Gossypium thurberi; Gossypium raimondii; Gossypium trilobum. 81 samples. Type: Expression profiling by high throughput sequencing.
Phenotypical and gene expression analyses of Rfo-sa1 resistant eggplant interaction with Fusarium oxysporum f. sp. melongenae and Verticillium dahliae
GEO Series GSE75958. Solanum virginianum. 36 samples. Type: Expression profiling by array.
Verticillium dahliae disease resistance and the regulatory pathway for maturity and tuberization in potato
GEO Series GSE107936. Solanum tuberosum. 289 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome sequencing of Verticillium dahliae with different virulence
GEO Series GSE131467. Verticillium dahliae. 3 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae inoculated cotton roots
GEO Series GSE28236. Gossypium barbadense; Gossypium hirsutum. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptome and metabolome profiling reveals key pathways and metabolites involved in defense response of upland cotton against Verticillium dahliae
GEO Series GSE221845. Gossypium hirsutum. 12 samples. Type: Expression profiling by high throughput sequencing.
The transcriptional landscape of Nicotiana benthamiana and Verticillium dahliae interaction
GEO Series GSE236729. Verticillium dahliae; Nicotiana benthamiana. 22 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.