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40 results for “Woodlice”
Fig. 1 in The woodlice (Crustacea: Isopoda) described by Henri de Saussure and Jean Carl
Fig. 1. Isopoda collected by Henri de Saussure in Mexico and the Antilles. Photograph Philippe Wagneur.
RNA-Seq data of common woodlice Porcellio scaber
<p>This dataset contains raw transcriptome sequences of common woodlice <em>Porcellio scaber</em> (Crustacea: Isopoda), an important model species in ecotoxicology, developmental biology, immunology and physiology studies. In this context, dataset (transcriptome) provides a cornerstone for all future gene-based research of <em>P. scaber</em>. </p> <p>For transcriptome construction, total RNA was extracted from the whole organism of <em>P. scaber</em>. The extracted RNA was checked for quantity, purity, and integrity and sent to Novogene (United Kingdom) for sequencing. The transcriptome was generated by high-throughput sequencing using an Illumina NovaSeq 6000 platform with 150 bp paired-end option. The dataset contains raw reads recorded in FASTQ format; Ps2_1.fq and Ps2_2.fq, containing Read 1 and Read 2 for paired-end sequencing, respectively.</p>
Figure 3 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Figure 3 Subtree of the Neighbor-joining topology based on Kimura 2-parameter distances of all analyzed specimens of Platyarthrus hoffmannseggii Brandt, 1833 and nearest neighbor. Branches with specimen ID-number from BOLD and sample localities. Numbers next to internal nodes are non-parametric bootstrap values (in %) with values higher than 80. BIN values are based on the barcode analysis from 05-06-2020. The isopod drawing by Christian Schmidt was obtained from Raupach (2005).
Supplementary material 1 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Supplementary data
Figure 5 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Figure 5 Distribution of Estonian Oniscidea. Red denotes studied specimens (1984–2020), blue = literature data 1970–1993, yellow = literature data 1927–1930 ALigidium hypnorumBTrichoniscus pusillusCHyloniscus ripariusDHaplophthalmus mengiiEPlatyarthrus hoffmannseggiiFTrachelipus rathkiiGPorcellio scaberHPorcellio spinicornisICylisticus convexusJOniscus asellusKArmadillidium opacumLArmadillidium pictumMArmadillidium pulchellumNArmadillidium zenckeriOArmadillidium vulgare. Porcellionides pruinosus has been omitted since the published source mentions no specific localities.
Figure 2 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Figure 2 Habitus of Estonian Oniscidea species ATrachelipus rathkiiBPorcellio scaberCPorcellio spinicornisDCylisticus convexusEOniscus asellus. Scale bars: 2 mm.
Figure 1 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Figure 1 Collecting localities of Estonian Oniscidea and numbers of sampled localities per 50 × 50 km UTM squares. For further details, see Table 1.
Figure 4 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Figure 4 Habitus of Estonian Oniscidea species APlatyarthrus hoffmannseggiiBLigidium hypnorum. Scale bars: 0.5 mm (A); 1 mm (B).
Figure 3 from: Sammet K, Orgusaar G, Ivask M, Kurina O (2021) An overview of Estonian woodlice (Isopoda, Oniscidea). ZooKeys 1067: 1-17. https://doi.org/10.3897/zookeys.1067.68105
Figure 3 Habitus of Estonian Oniscidea species ATrichoniscus pusillusBHyloniscus ripariusCArmadillidium zenckeriDArmadillidium opacumEArmadillidium pulchellum. Scale bars: 1 mm.
Supplementary material 2 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Neighbor-joining topology
Supplementary material 1 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Barcode analysis using the BOLD workbench
Figure 1 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Figure 1 Various woodlouse species of Germany AOniscus asellus Linnaeus, 1758 BArmadillidium nasatum Budde-Lund, 1885 CTrachelipus ratzeburgii (Brandt, 1833) DMesonicus alpicola (Heller, 1858) EPhiloscia muscorum (Scopoli, 1763) FHaplophthalmus mariae Strouhal, 1953 GArmadillidium opacum (C. Koch, 1841) HPlatyarthrus hoffmannseggii Brandt, 1833. Scale bar: 1 mm. Photograph credits: A–G Jörg Spelda H Armin Rose.
Supplementary material 3 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Neighbor-joining topology of the BOLD workbench including BIN analysis
Figure 2 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Figure 2 Neighbor-joining (NJ) topology of the analyzed isopod species based on Kimura 2-parameter distances. Triangles show the relative number of individual's sampled (height) and sequence divergence (width). Red triangles highlight terrestrial species with intraspecific maximum pairwise distances > 2.2%, whereas dark blue triangles indicate freshwater species with such distances. Numbers next to nodes represent non-parametric bootstrap values > 90% (1,000 replicates). Asterisks indicate species not recorded in Germany.
Figure 1 from: Gongalsky K (2012) Cartographic analysis of woodlice fauna of the former USSR. ZooKeys 176: 1-11. https://doi.org/10.3897/zookeys.176.2372
Figure 1 - Map of woodlice presence or absence over the plain territory of the former USSR. The duration of period with temperature >10°C is adapted from Geographical Atlas of the USSR (Kolosova 1980).
Figure 3 from: Devigne C, Broly P, Mullier R, Deneubourg J (2012) Aggregation in woodlice: social interaction and density effects. ZooKeys 176: 133-144. https://doi.org/10.3897/zookeys.176.2258
Figure 3 - Dynamics of aggregation under shelters. Average proportion of woodlice aggregated under the "winning" and the "losing" shelter for experiments showing a clear choice of one of both shelters (Binomial test, difference from an equal distribution of woodlice between shelters).
Figure 4 from: Devigne C, Broly P, Mullier R, Deneubourg J (2012) Aggregation in woodlice: social interaction and density effects. ZooKeys 176: 133-144. https://doi.org/10.3897/zookeys.176.2258
Figure 4 - Dynamics of aggregation under the "winning" shelter. Evolution of the average number of woodlice under the winning shelter as a function of time for the four densities tested and for experiments showing a clear choice of one of both shelters. Standard deviations are presented for each 4 minutes. Horizontal lines below the graph indicated the statistical differences between densities; these differences were pointed out by a Kruskal-Wallis followed by a Dunn's tests for each minute of the experiments.
Figure 2 from: Devigne C, Broly P, Mullier R, Deneubourg J (2012) Aggregation in woodlice: social interaction and density effects. ZooKeys 176: 133-144. https://doi.org/10.3897/zookeys.176.2258
Figure 2 - Choice of one shelter. Proportion of choice of a shelter at the end of the experiments as a function of woodlice density.
Supplementary material 1 from: Wood CT, Nihei SS, Araujo PB (2018) Woodlice and their parasitoid flies: revision of Isopoda (Crustacea, Oniscidea) – Rhinophoridae (Insecta, Diptera) interaction and first record of a parasitized Neotropical woodlouse species. In: Hornung E, Taiti S, Szlavecz K (Eds) Isopods in a Changing World. ZooKeys 801: 401-414. https://doi.org/10.3897/zookeys.801.26052
Compilation of Isopoda-Rhinophoridae records (Dataset) :
Supplementary material 1 from: Csonka D, Halasy K, Buczkó K, Hornung E (2018) Morphological traits – desiccation resistance – habitat characteristics: a possible key for distribution in woodlice (Isopoda, Oniscidea). In: Hornung E, Taiti S, Szlavecz K (Eds) Isopods in a Changing World. ZooKeys 801: 481-499. https://doi.org/10.3897/zookeys.801.23088
The non-significant results of the ANOVA tests :
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