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4 results for “Workflow Run RO-Crate”
RO-Crate created using Autosubmit version 4.0.100 workflow running kinow/auto-mhm-test-domains
<p>This dataset is an <a href="https://www.researchobject.org/ro-crate/">RO-Crate</a> representation of an execution of an example Autosubmit workflow that executes <a href="https://mhm-ufz.org/">mHM</a>, the UFZ mesoscale Hydrologic Model. The example was created with Autosubmit version 4.0.100. The source code of the workflow can be found at <a href="https://github.com/kinow/auto-mhm-test-domains">https://github.com/kinow/auto-mhm-test-domains</a>, commit <a href="https://github.com/kinow/auto-mhm-test-domains/commit/c2672568fb14706c6e66481bc7ceac467db8261e">c267256</a>. This dataset was <a href="https://github.com/ResearchObject/workflow-run-crate/pull/61">validated by the RO-Crate community</a>.</p>
Example of Workflow Run RO-Crate Output in Sapporo
<p>This is an archive of the contents under <a href="https://github.com/sapporo-wes/sapporo-service/tree/main/tests/ro-crate/ro-crate_dir">https://github.com/sapporo-wes/sapporo-service/tree/main/tests/ro-crate/ro-crate_dir</a> as of <a href="https://github.com/sapporo-wes/sapporo-service/releases/tag/1.5.1">version 1.5.1 of GitHub - sapporo-wes/sapporo-service</a>. For more details, please refer to <a href="https://github.com/sapporo-wes/sapporo-service/blob/main/tests/ro-crate/README.md">https://github.com/sapporo-wes/sapporo-service/blob/main/tests/ro-crate/README.md</a>.</p>
Workflow Run RO-Crate capturing provenance from WSI conversion
<p>Example of <a href="https://www.researchobject.org/workflow-run-crate/profiles/">Workflow Run RO-Crate</a> capturing provenance data from an execution of the <a href="https://github.com/crs4/fair-crcc-img-convert/tree/main">fair-crcc-img-convert</a> workflow on a whole-slide image from the <a href="https://doi.org/10.7937/25T7-6Y12">Cancer Moonshot Biobank - Prostate Cancer Collection (CMB-PCA)</a>.</p><ul><li>Slide ID: MSB-02917-01-02, generated by Natasha Honomichl</li><li>Image License: <a href="https://creativecommons.org/licenses/by/4.0/">CC BY 4.0</a></li></ul><p>Note that the license for the RO-Crate is CC BY 4.0, except for the workflow, which is licensed under the <a href="https://www.gnu.org/licenses/gpl-3.0.en.html">GPL-3.0</a>.</p>
Recording provenance of workflow runs with RO-Crate (RO-Crate and mapping)
<p>RO-Crate for the manuscript that describes Workflow Run Crate, includes mapping to PROV using SKOS/SSSOM.</p>
ScienceDex guides
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.