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25 results for “ancient metagenomics”
Introduction to Ancient Metagenomics Textbook (Edition 2025): de novo Genome Assembly
<p>Data and conda software environment file for the chapter '<em>de novo</em> Genome Assembly' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Authentication
<div> <p>Data and conda software environment file for the chapter 'Authentication' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p> </div>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to Git(Hub)
<p>Data and conda software environment file for the chapter 'Introduction to Git(Hub)' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to R and the Tidyverse
<p>Data and conda software environment file for the chapter 'Introduction to R and the Tidyverse' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to the Command Line
<p>Data and conda software environment file for the chapter 'Introduction to the Command Line' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to Python and Pandas
<p>Data and conda software environment file for the chapter 'Introduction to Python and Pandas' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Phylogenomics
<p>Data and conda software environment file for the chapter 'Phylogenomics' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Genome Mapping
<p>Data and conda software environment file for the chapter 'Genome Mapping' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Taxonomic Profiling, OTU Tables, and Visualisation
<p>Data and conda software environment file for the chapter 'Taxonomic Profiling, OTU Tables, and Visualisation' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Ancient Metagenomic Pipelines
<p>Data and conda software environment file for the chapter 'Ancient Metagenomic Pipelines' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Contamination
<p>Data and conda software environment file for the chapter 'Contamination' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2023): Authentication and Decontamination
<p>Data and conda software environment file for the chapter 'Authentication and Decontamination' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
Introduction to Ancient Metagenomics Textbook (Edition 2025): Accessing Ancient Metagenomic Data
<p>Data and conda software environment file for the chapter 'Accessing Ancient Metagenomic<br> Data' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 3b2 Introduction to Python and Pandas
<p>Teaching data for practical session: "3b2 Introduction to Python and Pandas" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 3b1 Introduction to R and the Tidyverse
<p>Teaching data for practical session: "3b1 Introduction to R and the Tidyverse" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2b Introduction to Github
<p>Teaching data for practical session: "2b Introduction to GitHub" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code class="language-bash">tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p> <p> </p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2c Introduction to AncientMetagenomeDir
<p>Teaching data for practical session: "2c Introduction to AncientMetagenomeDir" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 5b Introduction to Phylogenomics
<p>Teaching data for practical session: "5b Introduction to Phylogenomics" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2d Introduction to nf-core/eager
<p>Teaching data for practical session: "2d Introduction to nf-core/eager" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 4b Introduction to Genome Mapping
<p>Teaching data for practical session: "4b Introduction to Genome Mapping" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022).</p> <p>See: <a href="https://spaam-community.github.io/wss-summer-school/#/2022/">https://spaam-community.github.io/wss-summer-school/#/2022/</a> or <a href="https://doi.org/10.5281/zenodo.6976711">https://doi.org/10.5281/zenodo.6976711</a> for slides.</p> <p>Once downloaded, run:</p> <pre><code>tar xvfz <session>.tar.gz</code></pre> <p> to decompress the data directory for the session.</p>
ScienceDex guides
Understand access before you commit
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International Brain Laboratory public data
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OpenNeuro
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