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datasets available to search
ShareScore release 0.9.0
Dataset results
41 results for “avidity”
CEPHIA Evaluation Panel data for Maxim and Sedia Limiting Antigen Avidity assays
<p>CEPHIA Evaluation Panel dataset containing final ODn values for each assay. The first file contains results on all standard panel samples, and the second contains results on blinded control samples tested in replicate.</p>
AVID: Aalto Vocal Intensity Database
<p><strong>Data description:</strong></p> <p>AVID includes speech and EGG produced by 50 speakers (25 males, 25 females) who varied their vocal intensity in four categories (soft, normal, loud, and very loud). Recordings were conducted using a constant mouth-to-microphone distance and by recording a calibration tone. The speech data was labeled sentence-wise using a total of 19 labels that support the utilisation of the data in ML-based studies of vocal intensity based on supervised learning. Further information can be found in the<em> 'readme.docx'</em> file from the upload.</p> <p><strong>when collected the data:</strong></p> <p>Data is collected in 2021</p> <p><strong>Citation</strong>:</p> <p>P. Alku, M. Kodali, L. Laaksonen, S.R. Kadiri, AVID: A speech database for machine learning studies on vocal intensity, Speech Communication, Vol. 157, Article 103039, 2024. <a href="https://doi.org/10.1016/j.specom.2024.103039" target="_blank" rel="noopener noreferrer">https://doi.org/10.1016/j.specom.2024.103039</a></p> <p> </p>
Dataset: Avid Bioservices, Inc. (CDMO) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
Dataset: Avidity Biosciences, Inc. (RNA) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
Force-tuned Avidity of Spike Variant-ACE2 Interactions viewed on the Single-Molecule Level - MD simulations Dataset
<p>Models of SARS-CoV-2 virus spike protein bound to 1-3 of ACE2 receptors embedded in lipid nanodisks. Systems include all files in GROMACS format needed to reproduce simulations performed in the "Force-tuned Avidity of Spike Variant-ACE2 Interactions viewed on the Single-Molecule Level" article.</p> <p> </p> <table> <caption>Details</caption> <thead> <tr> <th scope="col">system</th> <th scope="col">box size (x-y-z) [nm]</th> <th scope="col">Number of atoms</th> </tr> </thead> <tbody> <tr> <td>Spike +<br> 1x ACE2, full length</td> <td>33.44834 28.96711 57.95573</td> <td>5,665,217</td> </tr> <tr> <td>Spike +<br> 1x ACE2, truncated</td> <td>28.05757 24.29856 46.74417</td> <td>3,203,907</td> </tr> <tr> <td>Spike +<br> 2x ACE2, truncated</td> <td>28.30864 21.23141 48.40873</td> <td>2,936,398</td> </tr> <tr> <td>Spike +<br> 3x ACE2, truncated</td> <td>28.32733 21.24544 48.30436</td> <td>2,936,588</td> </tr> </tbody> </table>
Quality of vaccination-induced T cell responses is conveyed by polyclonality and high, but not maximum, antigen receptor avidity
<p>This repository contains the processed data of the single-cell T cell analysis connected to the manuscript "Diverse and balanced repertoires of high-functionality T cell receptors are induced by SARS-CoV-2 mRNA vaccination" from Kocher and Drost et al. </p> <p>The data is stored in the AnnData (Scanpy+Scirpy) format and can be reproduced with this GitHub repository (<a href="https://github.com/SchubertLab/CovidVac_CD8">https://github.com/SchubertLab/CovidVac_CD8/</a>) from the raw data stored under GEO accession numbers GSE261966, GSE261967, and GSE249998. </p> <p><span><span> </span></span></p>
Underlying dataset for figures published in "A tool for evaluating heterogeneity in avidity of polyclonal antibodies"
<p>The dataset consists of all underlying data associated with Li et al. Front Immunol. 2023, 16;14:1049673. (doi: 10.3389/fimmu.2023.1049673.). Each folder corresponds to data shown in a single figure, with the figure number indicated in the folder names. Please refer to the ReadMe.pdf for information on the content of the figure-specific folders.</p>
Titrating Avidity of Yeast-Displayed Proteins Using a Transcriptional Regulator
<p>Data underlying the figures in the publication: Lopez-Morales, J. <em>et al.</em> “Titrating Avidity of Yeast-Displayed Proteins Using a Transcriptional Regulator” <em>ACS Synth. Biol.</em> <strong>2023</strong>, <em>12</em>, 419-31, <a href="https://doi.org/10.1021/acssynbio.2c00351">https://doi.org/10.1021/acssynbio.2c00351</a></p> <p><strong>Table of Contents</strong></p> <p><strong>Fig1_subplots_EMpty pJL100 full atc range analysis.xlsx:</strong> Flow cytometry data of displaying fraction and median fluorescence for Fig. 1c and d.</p> <p><strong>Fig2_subplots_20.08.05 tit disp GOx ABTS.xlsx:</strong> Flow cytometry data of displaying fraction and median fluorescence of Gox variants; GOX enzymatic activity assay data for Fig. 2</p> <p><strong>Fig3_subplots_ SDA data for sharing.xlsx and disks + sup data plot.pptx:</strong> Spinning disk assay data and micrographs for Fig. 3.</p> <p><strong>Fig4_ subplots_20220421 YTD affibody aTc vs Gal titration curves.xlsx and 20220423 Gal good volume.xlsx: </strong>Flow cytometry data and PDL1 titration on yeast data for Fig. 4.</p> <p><strong>Supplementary_Gal comparison_</strong> <strong>Gal time point-2.xlsx: </strong>Flow cytometry data for comparing the YTD system to the standard yeast surface display for sup. Fig. S1.</p> <p><strong>Supplementary_Fig S3_Titrated Affibody Kd analysis.xlsx and Simulations.pzf:</strong> ICE tables and simulation spreadsheet for sup. Fig. S3.</p>
Flexible Insulin Therapy Untethered Insulin Regimen in Avidly Exercising Patients With Type 1 Diabetes: FIT Untethered
ClinicalTrials.gov study NCT03838783. IPD Sharing: NO. Countries: 1. Publications: 8.
Data from: Persistent low toxoplasma IgG avidity is common in pregnancy: experience from antenatal testing in Norway
Open the record for dataset details and reuse information.
Antiarrhythmics Versus Implantable Defibrillators (AVID)
ClinicalTrials.gov study NCT00000531. IPD Sharing: Not stated. Countries: 0. Publications: 49.
Comparing Over the Counter Pain Medicines for Discomfort in Crohn's Disease (AVID-CD)
ClinicalTrials.gov study NCT07337902. IPD Sharing: YES. Countries: 1. Publications: 0.
Low avidity T cells drive endogenous tumor immunity in mice and humans
GEO Series GSE282069. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Antigen-Multimers: Specific, Sensitive, Precise, and Multifunctional High-Avidity CAR-Staining Reagents
GEO Series GSE169086. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Neoantigen-Specific CD8 T Cells with High Structural Avidity Preferentially Reside in and Eliminate Tumors (GEX)
GEO Series GSE232444. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Gene and miRNA expression in radioiodine refractory and avid papillary thyroid carcinomas
GEO Series GSE151181. Homo sapiens. 99 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Signatures of recent activation identify a circulating T cell compartment containing tumor-specific antigen receptors with high avidity
GEO Series GSE205145. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of human CD4+ and CD8+ T cells transduced with a TAA-specific low-avidity TCR and the CD8αβ co-receptor
GEO Series GSE132164. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Neoantigen-Specific CD8 T Cells with High Structural Avidity Preferentially Reside in and Eliminate Tumors
GEO Series GSE232447. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Neoantigen-Specific CD8 T Cells with High Structural Avidity Preferentially Reside in and Eliminate Tumors (VDJ)
GEO Series GSE232446. Homo sapiens. 4 samples. Type: Other.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.