Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
276
datasets available to search
ShareScore release 0.9.0
Dataset results
276 results for “borer”
Data from "Resource pulses drive spatio-temporal dynamics of non-native bark beetles and wood borers"
<p>This is a compilation of datasets that were used for the publication entitled "Resource pulses drive spatio-temporal dynamics of non-native bark beetles and wood borers" by Eckehard G. BROCKERHOFF, Stephanie L. SOPOW, and Martin K.-F. BADER, published in the Journal of Applied Ecology, 'in press' in October 2024.</p> <p>Note: The date format is either (i) season (spring/summer/autumn/winter) plus a two-figure short form for the year (e.g., "autumn08" stands for autumn 2008), or (ii) just the year for an annual total in either four- or two-figure form in the file name (e.g., "reg2010sums.csv" or "reg10sums.csv" for the year 2010).</p> <p>1. File "mean_trap_catches.csv" = Data used for Fig. 1 - Mean trap catch data of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus over time in Kaingaroa forest stands 378 ("F2006"), 377 ("F2009"), and 383 ("F2010"). For further explanations see methods of Brockerhoff et al. (2024).</p> <p>2. File "reg2010sums.csv" = Data used for Fig. 2 - Year 2010, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 2 in Brockerhoff et al. (2024).</p> <p>3. File "reg2010sums.csv" = Data used for Fig. 2 - Year 2011, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 2 in Brockerhoff et al. (2024).</p> <p>4. File "reg2010sums.csv" = Data used for Fig. 2 - Year 2012, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 2 in Brockerhoff et al. (2024).</p> <p>5. File "reg10sums.csv" = Data used for Fig. 3 - Year 2010, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 3 in Brockerhoff et al. (2024).</p> <p>6. File "reg11sums.csv" = Data used for Fig. 3 - Year 2011, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 3 in Brockerhoff et al. (2024).</p> <p>7. File "reg12sums.csv" = Data used for Fig. 3 - Year 2012, annual trap catches of Hylastes ater, Hylurgus ligniperda and Arhopalus ferus indicating approximate dispersal distances between Pinus radiata stands. For details see caption of Fig. 3 in Brockerhoff et al. (2024).</p> <p>8. File "hylu2010-fitted_dispersal_to_5km-Version_23May2024.csv" = Data shown in Fig. 4 - Extension of the prediction range to 5 km of Hylurgus ligniperda dispersal data, using a generalised additive mixed model (GAMM) with beta distributed errors and the default logarithmic link. For details see caption of Fig. 4 and methods in Brockerhoff et al. (2024).</p> <p> </p>
The mycobiome of the gut of willow wood borer, Xiphydria prolongata (Hymenoptera: Xiphydriidae): a rich source of rare yeasts
<p>A high-throughput amplicon sequencing as a culture-independent approach was used to identify the gut mycobiome of the willow wood borer <em>Xiphydria prolongata</em>. The findings of this study are significance in terms of the insect-fungal interactions and indicate the unexpected richness of the mycobiome and the presence of many rare yeast species in the wood borer gut. A total of 40 fungal genera were found, and among them, only one endophytic fungi, <em>Daldinia</em> (Hypoxylaceae), has been previously reported in <em>Xiphydria.</em> <em>Zygosaccharomyces siamensis</em> is the most prevalent ascomycete species, while <em>Rhodosporidiobolus colostri</em> is the most abundant basidiomycetous yeast in <em>X. prolongata</em>. Some of the species identified in here was known as very rare fungus such as <em>Skoua fertilis</em>, <em>Chaetomium nepalense, R. colostri </em>and<em> Vustinia terrae</em>. This study is also the first report to <em>S. fertilis </em>and<em> V. terrae</em> in the insect gut flora. These funguses most likely aid in the digestion of lignocellulose in the gut of wood borer. Therefore, further researches are required to know the source of acquisition and functional role of these yeast and their industrial potential.</p>
Occurrence records used to develop a climatic suitability model for emerald ash borer in DDRP
<p>Presence records used to calibrate and validate a climatic suitability model for emerald ash borer in the DDRP platform (Degree-Days, Risk, and Phenological event mapping) (Barker et al. 2023). The first sheet ("Records") of the Excel file provides the range (native or invaded), continent, country, state or province, locality, latitude, and longitude of origin for each record. The "Coords_est" column indicates whether the coordinates were estimated from city- or county-level information (1 = yes, 0 = no). The year in which the record was collected is provided if known. The second sheet of the Excel file ("References") provides a list of references for each record source.</p>
The dual invasion of Amur honeysuckle and Emerald Ash Borer Shifts Fungal Driven Decomposition in Midwestern Forests
Midwestern forests are currently impacted by two prominent invaders, the Emerald Ash Borer (EAB), Agrilus planipennis and Amur honeysuckle, Lonicera maackii. The loss of ash (Fraxinus spp.) trees due to EAB invasion can further facilitate honeysuckle invasion, driving changes in the composition of forest leaf litter. To evaluate the extent to which these changes alter ecosystem function, we conducted litter bag and culture-based decomposition experiments using leaf litter from sugar maple (Acer saccharum), oak (Quercus spp.), black ash (Fraxinus nigra), green ash (Fraxinus pennsylvanica), spicebush (Lindera benzoin), and Amur honeysuckle (Lonicera maackii). To further understand the mechanism driving differences in decay rates, we inoculated six species of decomposing fungi separately onto both single species and multispecies (half honeysuckle and half native species) leaf litter and measured decomposition rate, fungal growth and enzymatic activity in laboratory-based cultures. Honeysuckle leaf litter decomposed faster, had increased fungal growth, and had higher activity for carbon degrading enzymes compared to native species leaf litter. Furthermore, multispecies mixtures followed the same patterns as honeysuckle, suggesting that the addition of honeysuckle to leaf litter will accelerate ecosystem functions related to carbon breakdown. Consequently, forests that experience the invasion of honeysuckle and EAB induced loss of ash are likely to have faster decomposition, potentially resulting in an influx of available nutrients.
Data for 'Floral color and family drive contrasting plant-pollinator responses to nutrient enrichment' by Rebecca A. Nelson, Elizabeth T. Borer, and Eric W. Seabloom 2025. Collected in California grasslands 2023 and 2024.
Data for analysis of how flower color and family mediate plant-pollinator response to nutrient enrichment. Data on pollinator visitation and flower abundance were collected in three California grasslands in 2023 and 2024 from a factorial experimental in which combinations of nitrogen, phosphorus, and potassium with micronutrients were applied.
Data for "Pollinator Conservation Paradox: Exotic Forbs Support Native Pollinators Under Global Changes" by Nelson, Seabloom and Borer 2025, California grasslands, 2023-2024
Data for analysis on how plant provenance mediates plant-pollinator interaction responses to fertilization and herbivore exclusion, associated with Nelson, Seabloom, and Borer 2025. Data on pollinator visitation and floral abundance were collected in plots that received factorial experimental treatments of combined nitrogen, phosphorus and potassium with micronutrients by herbivore exclusion fencing in three California grasslands in 2023-2024.
Figs 1–3. Dolichomitus juglanse Sheng & Li in Two species of Dolichomitus Smith, 1877 (Hymenoptera, Ichneumonidae, Pimplinae) parasitizing borers of Juglans mandshurica Maxim. and a key to species known from China
Figs 1–3. Dolichomitus juglanse Sheng & Li sp. nov., ♀, holotype (CBDPC). 1. Habitus, lateral view. 2. Head, anterior view. 3. Head and pronotum, lateral view.
Figs 8–12. Dolichomitus juglanse Sheng & Li in Two species of Dolichomitus Smith, 1877 (Hymenoptera, Ichneumonidae, Pimplinae) parasitizing borers of Juglans mandshurica Maxim. and a key to species known from China
Figs 8–12. Dolichomitus juglanse Sheng & Li sp. nov. 8–10. ♀, holotype (CBDPC). 8. Metasoma, dorsal view. 9. Apical portion of ovipositor, lateral view. 10. Fore wing. 11–12. ♂, paratype (CBDPC). 11. Habitus, lateral view. 12. Apical portion of metasoma, lateral view. 13–14. Dolichomitus nakamurai (Uchida, 1928), ♀ (CBDPC). 13. Propodeum, dorsal view. 14. Metasoma, dorsal view.
Figure S1 in First report of Rhabditis (Rhabditella) axei with the invasive palm borer Paysandisia archon
Figure S1: Bayesian trees of the genus Rhabditis based on A) SSU and B) LSU gene fragments. Accession numbers of sequences were reported in brackets and posterior probability was annotated near the branches. The strains isolated during this work were highlighted in red.
Figure 1 in First report of Rhabditis (Rhabditella) axei with the invasive palm borer Paysandisia archon
Figure 1: Rhabditis axei: (A) male, entire body; (B) head region at SEM; (C) pharyngeal region; (D) vulva; (E) eggs at mid-body; (F) spicules and gubernaculum; (G) spicules at SEM.
Fig. 1 in Sugarcane stem borers of the Colombian Cauca River Valley: current pest status, biology, and control
Fig. 1. Male adults of 4 Diatraea species present in Colombia. A. D. saccharalis; B. D. indigenella; C. D. tabernella; D. D. busckella. In general, moths are difficult to distinguish, and clear species identification requires the dissection of male genitalia (photos L. A. Lastra).
Fig. 3. A in Sugarcane stem borers of the Colombian Cauca River Valley: current pest status, biology, and control
Fig. 3. A. "Dead heart" in sugarcane caused by Diatraea sp. (photo M. Rodríguez), and B. bored internode by Diatraea sp. can disrupt apical dominance and promote growth of multiple lateral shoots, diverting resources from sucrose synthesis to vegetative growth (photo AE Bustillo).
Fig. 2 in Sugarcane stem borers of the Colombian Cauca River Valley: current pest status, biology, and control
Fig. 2. Larvae of 4 Diatraea species present in Colombia. A. D. saccharalis; B. D. indigenella; C. D. tabernella; D. D. busckella. In general, larvae of D. saccharalis exhibit a well-sclerotized set of setal plates along their length, whereas the setal plates are ofen less distinguishable in D. indigenella due to dark, longitudinal dorsal stripes. Larvae of D. tabernella possess a distinctive set of blackish setal plates and adjacent purple spots that resemble transverse lines, which are absent in D. busckella (photos L. A. Lastra).
Fig. 2 in A mysterious wing spine in male coffee berry borers (Coleoptera: Curculionidae: Scolytinae)
Fig. 2. Low temperature-scanning electron microscope photographs showing the wing spine in three lef wings (a, b, c), and a detail of the spine (d).
Fig. 1. A in Monitoring coffee berry borer, Hypothenemus hampei (Coleoptera: Curculionidae), populations with alcoholbaited funnel traps in coffee farms in Colombia
Fig. 1. A red funnel trap used to capture CBB (Hypothenemus hampei) (A) and the methanol–ethanol lure (3: 1 ratio) enclosed in a semi-permeable membrane (B). CBB were collected in a plastic container containing 200 mL of soapy water. Photo Alex. E. Bustillo.
Fig. 2 in Monitoring coffee berry borer, Hypothenemus hampei (Coleoptera: Curculionidae), populations with alcoholbaited funnel traps in coffee farms in Colombia
Fig. 2. Number of CBB (Hypothenemus hampei) captured per trap per month (mean ± SEM) and corresponding berry infestation (%) on large coffee farms (≥ 20 ha) in Risaralda, Caldas, Colombia (A), and on small coffee farms (≤ 3 ha) in Viterbo, Caldas, Colombia (B) in 2003-2004. Note differences in axis scales.
Fig. 6 in RNA interference mediated serine protease gene (Spbtry1) knockdown affects growth and mortality in the soybean pod borer (Lepidoptera: Olethreutidae)
Fig. 6. The mortality of the larvae feed on an artficial diet with added dsRNA. (*Student's t-test, n = 3, P <0.05; **Student's t-test, n = 3, P <0.01).
Fig. 4 in RNA interference mediated serine protease gene (Spbtry1) knockdown affects growth and mortality in the soybean pod borer (Lepidoptera: Olethreutidae)
Fig. 4. Relatve trypsin gene (Spbtry1) expression levels as determined by qPCR at different tme points. Actn was used as an internal reference gene. (*Student's t-test, n = 3, P <0.05; **Student's t-test, n = 3, P <0.01).
Fig. 5 in RNA interference mediated serine protease gene (Spbtry1) knockdown affects growth and mortality in the soybean pod borer (Lepidoptera: Olethreutidae)
Fig. 5. Effect of Spbtry1 RNAi on Leguminivora glycinivorella larval development. (A) The body weight of larvae fed on an artficial diet with added dsRNA at different tme points. (B) Pictures of the larvae showing reduced body size and developmental stage afer 15 days on an artficial diet with added dsRNA. (*Student's t-test, n = 3, P <0.05; **Student's t-test, n = 3, P <0.01).
Fig. 3. A in RNA interference mediated serine protease gene (Spbtry1) knockdown affects growth and mortality in the soybean pod borer (Lepidoptera: Olethreutidae)
Fig. 3. A) Relatve Spbtry1 gene expression levels was determined by qPCR (histograms) and RT-PCR (gel pictures) in the synganglion (SY), cutcle (CU), salivary (SA), midgut (MG), ovary (OV), tests (TE), and fat body (FT) in the 3rd instar soybean pod borer larvae. Actn was used as an internal reference gene. (B) Relatve trypsin gene (Spbtry1) expression levels as determined by qPCR (histograms) and RT-PCR (gel pictures) in soybean pod borer eggs (EG), 1st (N1), 2nd (N2), 3rd (N3), 4th (N4) instar larvae and pupae (PU), and adults (AD). Actn was used as an internal reference gene. Relatve Spbtry1 gene expression was analyzed by MJ Optcon Monitor Sofware Version 3.1.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.